View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10671_high_10 (Length: 306)
Name: NF10671_high_10
Description: NF10671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10671_high_10 |
 | |
|
| [»] scaffold0190 (1 HSPs) |
| | |
|
| [»] scaffold0438 (1 HSPs) |
| | |
|
| [»] scaffold0188 (1 HSPs) |
| | |
|
| [»] scaffold0171 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold1026 (1 HSPs) |
| | |
|
| [»] scaffold0043 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 2353343 - 2353631
Alignment:
| Q |
7 |
taaatgacctcttattgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcattaatgtgccggaaagttagta |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| | |
|
|
| T |
2353343 |
taaatgacctcttattgtcttcaaatgcaaagaaaacaactaaaaacatagcctaaaatatcatacgatgctccgtcattaatgtgtcggaaagttagaa |
2353442 |
T |
|
| Q |
107 |
acgtgactctggatgcgatggatagttgtggagaatacactgatctacattctaatctccagaggattgtgactgaaacagatcctgccatccattatcg |
206 |
Q |
| |
|
|||| ||| |||| ||||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2353443 |
acgtaactttggaagcgatggatagttgtggagaatacattgatctatattctaatctcaaggggattgtgactgaaacagatcctgccatccattatcg |
2353542 |
T |
|
| Q |
207 |
attaaggcttagatggaagaattacgtaggtattgcagaccaagcgactcagtatttagggttttatatacatattttgatgttttcat |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2353543 |
attaaggcttagatggaagaattacgtaggtattgcagaccaagcgactcagtatttagggttttatatacatattttgatgttttcat |
2353631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 22532748 - 22532826
Alignment:
| Q |
10 |
atgacctcttattgtctt-caaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcatta |
87 |
Q |
| |
|
||||||| ||||| |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22532748 |
atgaccttttattttctttcaaatacaaataaaataactaaaaacatagcctaaaatatcatatgatgctccatcatta |
22532826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 19140076 - 19140152
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgt |
82 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||| |
|
|
| T |
19140076 |
taaatgacctcttttttgtcttcaaatgcaaagaaaataacttaaaacatagccaaaaatattatatgatgttccgt |
19140152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 20739475 - 20739551
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgt |
82 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||| |
|
|
| T |
20739475 |
taaatgacctcttttttgtcttcaaatgcaaagaaaataacttaaaacatagccaaaaatattatatgatgttccgt |
20739551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 29544517 - 29544453
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
29544517 |
ttgtcttcaaatgcaaagaaaattaataaaaacatagccaaaaatatcatatgatgctccttcat |
29544453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 18496559 - 18496499
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
18496559 |
cttcaaatgcaaagaaaactactaaaaacatagcctaaaatatcatatggtgctccatcat |
18496499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 28952059 - 28952120
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
28952059 |
tcttcaaatgtaaagaaaatgactaaaagcatagcctaaagtatcatatgatgctctgtcat |
28952120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 5312899 - 5312959
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||| || | ||||||||||||||||||| |
|
|
| T |
5312899 |
cttcaaatgcaaagaaaataattaaaaaactagccttaattttcatatgatgctccgtcat |
5312959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 7142096 - 7142032
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||| |||||||||||||| | ||||||||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
7142096 |
ttgtctttaaatgcaaagaaaactattaaaaacatagccaaaaatgtcatatgatgctctgtcat |
7142032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 12358878 - 12358942
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||| |||||||||||||||| |||| ||||| ||||||||||| |||||||| |||||| |
|
|
| T |
12358878 |
ttgtcttcttatgcaaagaaaataacaaaaagcatagtctaaaatatcacatgatgcttcgtcat |
12358942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 16536691 - 16536754
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | |||||||||| |||||| ||| |||| |
|
|
| T |
16536691 |
ttgtcttcaaatgcaaagaaaataac-caaaacataacttaaaatatcagatgatgttccatcat |
16536754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 16577389 - 16577452
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| | ||||||||||||||||| ||| |||| |
|
|
| T |
16577389 |
ttgtcttcaaatgcaaagaaaatagc-caaaacataccttaaaatatcatatgatgttccatcat |
16577452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 16588273 - 16588210
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| | ||||||||||||||||| ||| |||| |
|
|
| T |
16588273 |
ttgtcttcaaatgcaaagaaaatagc-caaaacataccttaaaatatcatatgatgttccatcat |
16588210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 16628971 - 16628908
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | |||||||||| |||||| ||| |||| |
|
|
| T |
16628971 |
ttgtcttcaaatgcaaagaaaataac-caaaacataacttaaaatatcagatgatgttccatcat |
16628908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 3269117 - 3269163
Alignment:
| Q |
39 |
aaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||| |||| ||||| |
|
|
| T |
3269117 |
aaaaaaactaaaaacatagcctaaagtatcatatgaagctcggtcat |
3269163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 7494709 - 7494651
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctc |
79 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| |||||| |||||||||| |||||||| |
|
|
| T |
7494709 |
ttgtcttcaagtgcaaagaaaagtactaaaagaatagccaaaaatatcatgtgatgctc |
7494651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 20446238 - 20446173
Alignment:
| Q |
20 |
attgtcttcaaatgcaaag-aaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||||| |||| | ||||||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
20446238 |
attgtcttcaaatgcaaagaaaaagtattaaaaacatag-ctaaaatatcatatgttgctctgtcat |
20446173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 22067923 - 22067980
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaa-gaaaataactaaaaacatagcctaaaatatcatatgatgct |
78 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
22067923 |
ttgtcttcaaatgcaaataaaaattactaaaaacatagcc-aaaatgtcatatgatgct |
22067980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 46054711 - 46054650
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatat |
67 |
Q |
| |
|
|||||||| ||||||| | |||||||| |||| ||||||| |||||||||||| |||||||| |
|
|
| T |
46054711 |
taaatgacatcttatttgccttcaaatacaaaaaaaataattaaaaacatagcataaaatat |
46054650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 20)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 18236423 - 18236483
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
18236423 |
cttcaaatgcaaagaaaataactaaaaacatagcataaaatatcatatgatgctccgtcat |
18236483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 21505256 - 21505320
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21505256 |
ttgtcttcaaatgcaaagaaaaatactaaaaacatagccaaaaatatcatatgatgctccgtcat |
21505320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 27869365 - 27869445
Alignment:
| Q |
5 |
cataaatgacctcttattgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||| |
|
|
| T |
27869365 |
cataaatgacctcttatttgcttaaaatgcaaagaaaataactaaaaatatagcctaaaatattatattatgatccgtcat |
27869445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 24047395 - 24047328
Alignment:
| Q |
7 |
taaatgacctcttattgtc-ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatg |
73 |
Q |
| |
|
||||| |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
24047395 |
taaataacctcttattttccttcaaatgcaaataaaataactaaaaacatagcctaaaatatcatatg |
24047328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 39730460 - 39730385
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccg |
81 |
Q |
| |
|
||||||||| |||||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
39730460 |
taaatgaccccttatttgtcttcaattataaagaaaataactaaaaacatagcctaaaatattatatgatgctccg |
39730385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 31449956 - 31449891
Alignment:
| Q |
20 |
attgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||||||| ||| |||| |||| |
|
|
| T |
31449956 |
attgtcttcaaatgcaaataaaataactaaaaacatagcttaaaatatcataagatactccatcat |
31449891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 32276615 - 32276694
Alignment:
| Q |
7 |
taaatgacctcttattgtc-ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||||||||||| || ||| || ||||||||| ||| |||| |
|
|
| T |
32276615 |
taaatgacctcttattttccttcaaatgcaaagaaaataactaaaaacatatccaaaagtaccatatgatgttccttcat |
32276694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 17240970 - 17241019
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcat |
70 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17240970 |
ttgtcttcaaaggcaaagaaaataagtaaaaacatagcctaaaatatcat |
17241019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 30705250 - 30705173
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtc |
83 |
Q |
| |
|
|||||||| ||||||| ||||||||| |||||||||||||||||||||| || ||||||||||||||| ||||||| |
|
|
| T |
30705250 |
taaatgacatcttatttgtcttcaaaggcaaagaaaataactaaaaacagtgctgaaaatatcatatgatactccgtc |
30705173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 19541031 - 19540971
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||| |||||||||| ||| |||| |
|
|
| T |
19541031 |
cttcaaatgcaaagaaaataactaaaaacataggcaaaaatctcatatgatgttccatcat |
19540971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 20963729 - 20963793
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||| || ||||| |
|
|
| T |
20963729 |
ttgtcttcatatgcaaagaagataactaaaaatatagccaaaaatatcatatgatgttctgtcat |
20963793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 22164384 - 22164431
Alignment:
| Q |
38 |
gaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
22164384 |
gaaaataactaaaaatatagcctaaaatatcatatgatgctccatcat |
22164431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 29769681 - 29769623
Alignment:
| Q |
29 |
aaatgcaaagaaaataactaaaaa--catagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
29769681 |
aaatccaaagaaaataactaaaaaaacatagcctaaaatattatatgatgctccgtcat |
29769623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 32619640 - 32619586
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgat |
75 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
32619640 |
ttgtcttcaaatgcaaagaaaagtactaaaaatatagccaaaaatatcatatgat |
32619586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 16196002 - 16196053
Alignment:
| Q |
29 |
aaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccg |
81 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
16196002 |
aaatggaaagaaaataactaaaa-catagcctaaaatagcatatgatgctccg |
16196053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 22388873 - 22388921
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatg |
73 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |||| |||||||| |
|
|
| T |
22388873 |
cttcaaatgcaaagaaaatatctaaaaacatagctaaaaacatcatatg |
22388921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 28278544 - 28278603
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||| |
|
|
| T |
28278544 |
cttcaaatgcaaagaaaagtactaaaa-catagcaaaaaatatcatatgatgctctgtcat |
28278603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 21849213 - 21849254
Alignment:
| Q |
34 |
caaagaaaataactaaaaacatagcctaaaatatcatatgat |
75 |
Q |
| |
|
|||| |||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
21849213 |
caaaaaaaaaaactaaaaacataacctaaaatatcatatgat |
21849254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 25474035 - 25473971
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaata-actaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||||||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
25474035 |
ttgtcttcaaatgaaaataaaatgtactaaaaacatagcc-aaaatgtcatatgatgctctgtcat |
25473971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 31914050 - 31914087
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagc |
58 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31914050 |
ttgtcttcaaatgcaaagaaaaatactaaaaacatagc |
31914087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 23)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 13530207 - 13530286
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
13530207 |
taaatgacctcttatttgtcttcaattgcaaagaatataactaaaaacatagcctaaaacatcatatgatgctccatcat |
13530286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 13619746 - 13619825
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
13619746 |
taaatgacctcttatttgtcttcaattgcaaagaatataactaaaaacatagcctaaaacatcatatgatgctccatcat |
13619825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 29291765 - 29291708
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgt |
82 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
29291765 |
cttcaaatgaaaagaaaataacaaaaaacatagcctaaaatatcatatgatgttccgt |
29291708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 16052394 - 16052458
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16052394 |
ttgtcctcaaatgcaaataaaagtactaaaaacatagccaaaaatatcatatgatgctccgtcat |
16052458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 12774949 - 12775019
Alignment:
| Q |
11 |
tgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctcc |
80 |
Q |
| |
|
|||||||||||| |||||||||||| || |||||||||||||||| |||| ||| |||||||||||||||| |
|
|
| T |
12774949 |
tgacctcttatttgtcttcaaatgctaaaaaaataactaaaaacaaagccaaaagtatcatatgatgctcc |
12775019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 41505639 - 41505687
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaaca |
54 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
41505639 |
taaatgacctcttatttgtcttcaaatgcaaagaaaataactaaaaaca |
41505687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 26290940 - 26290999
Alignment:
| Q |
26 |
ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| || |||||||||| |||| |||| |
|
|
| T |
26290940 |
ttcaaatgcaaagaaaataacaaaaaacatagcctacaacatcatatgatactccctcat |
26290999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 26304197 - 26304256
Alignment:
| Q |
26 |
ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| || |||||||||| |||| |||| |
|
|
| T |
26304197 |
ttcaaatgcaaagaaaataacaaaaaacatagcctacaacatcatatgatactccctcat |
26304256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 26337552 - 26337611
Alignment:
| Q |
26 |
ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| || |||||||||| |||| |||| |
|
|
| T |
26337552 |
ttcaaatgcaaagaaaataacaaaaaacatagcctacaacatcatatgatactccctcat |
26337611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 24120226 - 24120165
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| |
|
|
| T |
24120226 |
tcttcaaatgcaaagaaaagtactaaaaacatagcaaaaaatatcatatgatgattcgtcat |
24120165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 30851220 - 30851269
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatga |
74 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30851220 |
cttcaaatataaagaaaataactaaaaacatagccaaaaatatcatatga |
30851269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 10867001 - 10866922
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||| | |||| ||| |||||||||||||||||| |||| | |||||||||||||||| ||| |||| |
|
|
| T |
10867001 |
taaatgacctcttatttgccttcgaattcaaagaaaataactaaaatcataccaaaaaatatcatatgatgttccatcat |
10866922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 11310324 - 11310379
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctc |
79 |
Q |
| |
|
|||||||||||||||| || |||||||||||||| ||||||||||||||||||| |
|
|
| T |
11310324 |
tcttcaaatgcaaagataagtactaaaaacatagcaaaaaatatcatatgatgctc |
11310379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 12956484 - 12956431
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgc |
77 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| | ||||||||| ||||||| |
|
|
| T |
12956484 |
tcttcaaatgcaaagaaaagtactaaaaacatagacaaaaatatcacatgatgc |
12956431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 31436473 - 31436413
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||| | |||||||||||||| |||| |||||||||||||||| |||| |||| |
|
|
| T |
31436473 |
cttcaaatgcagataaaataactaaaaatatagtataaaatatcatatgatactccatcat |
31436413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 6358695 - 6358632
Alignment:
| Q |
22 |
tgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||| ||||| |||||| ||||| ||||| |
|
|
| T |
6358695 |
tgtcttcaaatgcaaataaaagtactaaaaacatagcccaaaatgtcatatagtgctctgtcat |
6358632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 28901457 - 28901516
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctcc |
80 |
Q |
| |
|
|||| ||||||||||||||||| | ||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
28901457 |
ttgtattcaaatgcaaagaaaagtattaaaagcatagccaaaaatttcatatgatgctcc |
28901516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 30543761 - 30543711
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcata |
71 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||| ||||||||||| |
|
|
| T |
30543761 |
ttgtcttcaaatgcaaaaaaaaatactaaaaacatagctaaaaatatcata |
30543711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 16054292 - 16054228
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaag-aaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||| |||| |||||| |||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
16054292 |
ttgtcttcaaatgcaaagaaaaagtactaaagacatagcc-aaaatgtcatatgatgctctgtcat |
16054228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 32239282 - 32239229
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgc |
77 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| ||||||||||| ||||| |
|
|
| T |
32239282 |
tcttcaaatgtaaagaaaagtgctaaaaacatagccaaaaatatcatacgatgc |
32239229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 14424933 - 14424993
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||| | ||||||| |||||||||| || |||||||||||||||||| ||| |||| |
|
|
| T |
14424933 |
cttcaaattccaagaaaacaactaaaaacttaatctaaaatatcatatgatgttccatcat |
14424993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 14977224 - 14977280
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgc |
77 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
14977224 |
ttgtcttaaaatgcaaagaaaagtgctaaaaacatagttaaaaatatcatatgatgc |
14977280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 22894655 - 22894715
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||| ||||||| |||||||||||| | ||||| ||||||||||||| ||||| |
|
|
| T |
22894655 |
cttcaaatgcgaagaaaagtactaaaaacatacctaaaaatgtcatatgatgctctgtcat |
22894715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 24846274 - 24846195
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||| |
|
|
| T |
24846274 |
taaatgacctcttatttgtcttcaaatgcaaagaaagtaactaaaaatatagcctaaaacatcatatcatgctccgtcat |
24846195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 26070487 - 26070407
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcatta |
87 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||| ||||||||||| ||| |||||| |
|
|
| T |
26070487 |
taaatgacctcttatttgccttaaaatgcaaagaaaataactaaaaacatagcc-aaaaaatcatatgatgttccatcatta |
26070407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 22967959 - 22968023
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22967959 |
ttgtcttaacatgcaaagaaaactactaaaaacatagcctaaaatatcatatgatactccgtcat |
22968023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 23137552 - 23137603
Alignment:
| Q |
27 |
tcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgct |
78 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
23137552 |
tcaaatgcaaagaaaataactaaaaatatagcctaaaatattatatgatgct |
23137603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 20083460 - 20083414
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcata |
71 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
20083460 |
cttcaaatgcaaagaaaataattaaaaacatagcctaaaatatcata |
20083414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 17027526 - 17027466
Alignment:
| Q |
20 |
attgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctcc |
80 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
17027526 |
attgtctttaaatgcaaagaaaagtactaaaaacatagccaaaaatgtcatatgatgctcc |
17027466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 24130664 - 24130589
Alignment:
| Q |
11 |
tgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||| | ||| ||||||||| | |||||||| ||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
24130664 |
tgacctcttatttgccttaaaatgcaaatacaataactataaacatagcctaaaatatcatatcatgctccatcat |
24130589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 12340131 - 12340187
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctc |
79 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
12340131 |
ttgtcttcaaatgcaaagaaaat-actaaaaacatagcc-aaaatgtcatatgatgctc |
12340187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 24841751 - 24841687
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
24841751 |
ttgtcttcaaatgcaaagaatagtactaaaaacatagcaaaaaatgtcatatgatgctctgtcat |
24841687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 25594809 - 25594873
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||| |||||| ||||||||||| ||||| |
|
|
| T |
25594809 |
ttgtcttcaaatgcaaataaaagtactaaaaacatagccaaaaataatatatgatgctctgtcat |
25594873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 20694630 - 20694583
Alignment:
| Q |
29 |
aaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
20694630 |
aaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatg |
20694583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 17382152 - 17382210
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctc |
79 |
Q |
| |
|
||||||||||||||||| |||| |||||| ||||||| ||||||||||||||||||| |
|
|
| T |
17382152 |
ttgtcttcaaatgcaaaaaaaagtactaaacacatagcaaaaaatatcatatgatgctc |
17382210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 25075354 - 25075408
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||||| ||||| | |||||||| |
|
|
| T |
25075354 |
ttgtcttcaagtgcaaagaaaattactaaaaacatagcc-aaaatgtaatatgatg |
25075408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 25133323 - 25133377
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||||| ||||| | |||||||| |
|
|
| T |
25133323 |
ttgtcttcaagtgcaaagaaaattactaaaaacatagcc-aaaatgtaatatgatg |
25133377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 30790774 - 30790727
Alignment:
| Q |
26 |
ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatg |
73 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||| ||||| |
|
|
| T |
30790774 |
ttcaaatgcaaataaaataactaaaaacatagcaaaaaatattatatg |
30790727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 22229807 - 22229743
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataact-aaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||||| ||||| |
|
|
| T |
22229807 |
ttgtcttcaaatgcaaagaaaagtactaaaaaacatagcc-aaaatgacatatgatgctctgtcat |
22229743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 16622784 - 16622847
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||| ||| |||||| ||||||||||||| ||| |||||||||||| | |||||| |
|
|
| T |
16622784 |
ttgtcttcaaatgtaaaaaaaata-ctaaaaacatagctaaaattatcatatgatgatgcgtcat |
16622847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 24517352 - 24517305
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatca |
69 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| ||||||||||| |
|
|
| T |
24517352 |
ttgtcttcaaatgcaaagcaaagaactaaaaacata-actaaaatatca |
24517305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 30072176 - 30072113
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||| ||||||||| ||| ||||||||||| |||||| || |||||| |||||||| |
|
|
| T |
30072176 |
ttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgttccgtcat |
30072113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 18)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 26102070 - 26101991
Alignment:
| Q |
7 |
taaatgacctcttattgtc-ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
26102070 |
taaatgacctcttatttgcgttcaaatgcaaagaaaataactaaaaacatcgcctaaaatatcatatgatgctccatcat |
26101991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 18795194 - 18795124
Alignment:
| Q |
7 |
taaatgacctcttattgtc-ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||||| |||| |||||||||||||||||||| |||||| |
|
|
| T |
18795194 |
taaatgacctcttattttccttcaaatgcaaagaaaatcactagaaacatagcctaaaatatcacatgatg |
18795124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 27461283 - 27461357
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctcc |
80 |
Q |
| |
|
|||||||||||||||| || ||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
27461283 |
taaatgacctcttatttgtattcaaatacaaataaaataactaaaaacatagcgtaaaatatcatatgacgctcc |
27461357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 34935299 - 34935349
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcata |
71 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34935299 |
ttgtctttaaattcaaagaaaataactaaaaacatagcctaaaatatcata |
34935349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 25965476 - 25965545
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgat |
75 |
Q |
| |
|
|||||||||||||||| ||||| || | ||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
25965476 |
taaatgacctcttatttgtctttaagtacaaagaaaataactaaaaacataacctaaaacatcatatgat |
25965545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 13807857 - 13807924
Alignment:
| Q |
10 |
atgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
13807857 |
atgacctcttatttgtcttcaaatgtaaatgaaatatctaaaaacatagcctaaaatatcgtatgatg |
13807924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 31313565 - 31313494
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaa-aaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
||||||| |||||||| | ||||||||||||||||||||||||| |||||| ||||||| |||||||||||| |
|
|
| T |
31313565 |
taaatgaactcttatttgccttcaaatgcaaagaaaataactaagaaacatggcctaaattatcatatgatg |
31313494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 12424031 - 12424095
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaag-aaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
12424031 |
ttgtcttcaaatgcaaagaaaaagtactaaaaacatagcc-aaaatatcatatgatgctctgtcat |
12424095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 15298993 - 15299050
Alignment:
| Q |
28 |
caaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||| |
|
|
| T |
15298993 |
caaatgcaaagaaaatatataaaaacataacctaaaatatcatatgatgttccatcat |
15299050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 15417075 - 15417144
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgat |
75 |
Q |
| |
|
||||||| |||||||| |||||||||||| || ||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
15417075 |
taaatgatctcttatttgtcttcaaatgcgaataaaataactaaaaacatagattaaaatatcttatgat |
15417144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 23223410 - 23223345
Alignment:
| Q |
20 |
attgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||| |||||||||||||| ||| ||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
23223410 |
attgtctcaaaatgcaaagaaaagtacttaaaacatagccaaaaacatcatatgatgctccgtcat |
23223345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 25777953 - 25778012
Alignment:
| Q |
26 |
ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||| |
|
|
| T |
25777953 |
ttcaaatgcaaagaaaagcactaagaacatagcaaaaaatatcatatgatactccgtcat |
25778012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 26657474 - 26657407
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcattaa |
88 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||| | ||||||||||||||| || |||||||| |
|
|
| T |
26657474 |
ttgtcttcaaatgcaaagaaaagtaataaaaacatagtcaaaaatatcatatgatactatgtcattaa |
26657407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 50047179 - 50047127
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatg |
73 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||| ||||||||||||| |
|
|
| T |
50047179 |
ttgtcttcaaatgcaaagaaaagtatcaaaaacatagccaaaaatatcatatg |
50047127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 25373780 - 25373729
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||| ||||||| |||||| |
|
|
| T |
25373780 |
cttcaaatgcaaagaaaactactaaaaatatagcctagaatatcacatgatg |
25373729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 21451932 - 21451989
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaa-taactaaaaacatagcctaaaatatcatatgatgct |
78 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
21451932 |
ttgtcttcaaatgcaaagaaaacgtactaaaaacatagcc-aaaatgtcatatgatgct |
21451989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 25126474 - 25126421
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataa--ctaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
||||||||||||| |||| || ||||||||||||| ||||||||||||||||| |
|
|
| T |
25126474 |
cttcaaatgcaaaaaaaaaaaaactaaaaacatagcttaaaatatcatatgatg |
25126421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 18391095 - 18391035
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaata |
66 |
Q |
| |
|
|||||||| ||||||| ||||| |||| || ||||||||||||||||||| || ||||||| |
|
|
| T |
18391095 |
taaatgacatcttatttgtctttaaatacacagaaaataactaaaaacatggcttaaaata |
18391035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 12972486 - 12972556
Alignment:
| Q |
7 |
taaatgacctctta-ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
12972486 |
taaatgacctcttagttgccttcaaatgcaaagaaaataactaaaaacatagccaaaaatatcaaatgatg |
12972556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 1755660 - 1755733
Alignment:
| Q |
13 |
acctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||||| |
|
|
| T |
1755660 |
acctcttatttgtcttcaaattcaaagaaaataactaaaaacataacctgatatatcatatgatgctccgtcat |
1755733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 14924538 - 14924592
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctc |
79 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
14924538 |
cttcaaatgcaaagaaaataactaaaaacatagcctaatatatcatatggtgctc |
14924592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 9396701 - 9396780
Alignment:
| Q |
7 |
taaatgacctcttattgtc-ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||| |||||| ||||||||| | ||||||| |||||||| |||||||| |
|
|
| T |
9396701 |
taaatgacctcttattttccttcaaatgcaaagaacataacttaaaacatagtccaaaatattatatgatgttccgtcat |
9396780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 15576279 - 15576343
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
15576279 |
ttgtctttaaattcaaagaaaagtactaaaaacatagccaaaaatatcatatgatgctccatcat |
15576343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 16438630 - 16438574
Alignment:
| Q |
29 |
aaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||| |
|
|
| T |
16438630 |
aaatgcaaagaaagtaactaaaaacatagactaaaatatcatacgatgctctgtcat |
16438574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 20495898 - 20495974
Alignment:
| Q |
10 |
atgacctctta-ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||| ||| |||||||| |||||||||| |||||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
20495898 |
atgacctcttaattgccttcaaatacaaagaaaattactaaaaacatagcctaatttatcatatgatgttccatcat |
20495974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 30355320 - 30355260
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
30355320 |
cttcaaatgcaagtaaaagtactaaaaacatagccaaaaatatcatatgatgctccgtcat |
30355260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 26512879 - 26512939
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaata |
66 |
Q |
| |
|
|||||||||||||||| | ||||||||||||| ||||||||||||||||||| || ||||| |
|
|
| T |
26512879 |
taaatgacctcttatttgccttcaaatgcaaacaaaataactaaaaacatagtctgaaata |
26512939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 26517995 - 26518055
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaata |
66 |
Q |
| |
|
|||||||||||||||| | ||||||||||||| ||||||||||||||||||| || ||||| |
|
|
| T |
26517995 |
taaatgacctcttatttgccttcaaatgcaaacaaaataactaaaaacatagtctgaaata |
26518055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 33638585 - 33638664
Alignment:
| Q |
7 |
taaatgacctctta-ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||| ||||||| |||| |||||| ||||| |||||||||||||| ||||||||||||||| ||| ||| ||| |||| |
|
|
| T |
33638585 |
taaatggcctcttaattgtattcaaaagcaaataaaataactaaaaaaatagcctaaaatatcttataatgttccatcat |
33638664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 13835612 - 13835535
Alignment:
| Q |
9 |
aatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||| ||||||| ||||||| ||| ||||||||||||| |||||||||| |||| ||| ||||||| ||| |||| |
|
|
| T |
13835612 |
aatgacttcttatttgtcttcatatgaaaagaaaataacttaaaacatagctgaaaacatcttatgatgatccatcat |
13835535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 16527881 - 16527836
Alignment:
| Q |
34 |
caaagaaaataactaaaaacatagcctaaaatatcatatgatgctc |
79 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
16527881 |
caaagaaaagtactaaaaacatagccaaaaatattatatgatgctc |
16527836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 12974312 - 12974272
Alignment:
| Q |
45 |
actaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
12974312 |
actaaaaccatagcaaaaaatatcatatgatgctccgtcat |
12974272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0190 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0190
Description:
Target: scaffold0190; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 11818 - 11869
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11818 |
cttcaaatgcaaataaaataactaaaaacatagcctaaaatatcatatgatg |
11869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 10576466 - 10576387
Alignment:
| Q |
7 |
taaatgacctcttattgtc-ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||| |||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| |||| |
|
|
| T |
10576466 |
taaatgatctcttattttccttcaaatggaaagaaaataactaaaaacatagtctaaaatatcatatgatactccatcat |
10576387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 22119640 - 22119589
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22119640 |
cttcaaatgcaaagaaaataactaaaaacatagcataaaatatcatatgatg |
22119589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 13275903 - 13275966
Alignment:
| Q |
22 |
tgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||| ||| ||||||||||||| |||||||||||||||| ||||||||| |||||| |
|
|
| T |
13275903 |
tgtcttcaaatggaaacaaaataactaaaatcatagcctaaaatatcttatgatgctacgtcat |
13275966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 17339915 - 17339994
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||| ||||||||| | ||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
17339915 |
taaatgtcctcttatttgcctttaaatgtaaataaaataattaaaaacatagcctaaaatatcatatgatgctccatcat |
17339994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 16442363 - 16442432
Alignment:
| Q |
9 |
aatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgct |
78 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||| |||||||| |||| ||||||||||||| |
|
|
| T |
16442363 |
aatgacctcttatttgtcttcaaatgcaaagaaa-taactaaacacatagccgaaaacatcatatgatgct |
16442432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 46647190 - 46647132
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtc |
83 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
46647190 |
cttcaaatacaaagaaaataattaaaaacatagtgtaaaatatcatatgatgctccgtc |
46647132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 10320339 - 10320394
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctc |
79 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||| |
|
|
| T |
10320339 |
tcttcaaatggaaagaaaattactaaaaacatagcgaaaaatgtcatatgatgctc |
10320394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 20044177 - 20044118
Alignment:
| Q |
20 |
attgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctc |
79 |
Q |
| |
|
|||||||| ||||| ||| |||||||||||||||||||||||| | | |||||||||||| |
|
|
| T |
20044177 |
attgtctttaaatgtaaataaaataactaaaaacatagcctaagacaccatatgatgctc |
20044118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 31860000 - 31860043
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatat |
67 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
31860000 |
tcttcaaatgcaaaaaaaataactaaaaacatagccaaaaatat |
31860043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 9288198 - 9288144
Alignment:
| Q |
31 |
atgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||| |||||| |||| |
|
|
| T |
9288198 |
atgcaaagaaaactactaaaaacatatcctaaaatatcatatggtgctccttcat |
9288144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 15192201 - 15192135
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcatta |
87 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||| | ||||| ||||||||||||| ||||||| |
|
|
| T |
15192201 |
ttgtcttcaaatgcaaagaaaagtacgaaaaacataacaaaaaatgtcatatgatgctctgtcatta |
15192135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 24925818 - 24925748
Alignment:
| Q |
7 |
taaatgacctcttattg-tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
|||||||| ||||||| ||||||||| |||| |||||||||||||||||||| |||||||| ||| |||| |
|
|
| T |
24925818 |
taaatgacttcttatttatcttcaaatacaaataaaataactaaaaacatagcataaaatattataggatg |
24925748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 12111442 - 12111510
Alignment:
| Q |
16 |
tcttattgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtca |
84 |
Q |
| |
|
|||| ||||||||||||||||| |||| |||||||||||| | ||||| ||||||||||||| |||| |
|
|
| T |
12111442 |
tctttttgtcttcaaatgcaaataaaagtactaaaaacataacaaaaaatgtcatatgatgctctgtca |
12111510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 18897989 - 18897929
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccg |
81 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| |||| ||||| |||||||||| |||| |
|
|
| T |
18897989 |
ttgtcttcaaatgcaaagaaaagtagtaaaaacacagccaaaaatgtcatatgatgatccg |
18897929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 33519053 - 33519001
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagc |
58 |
Q |
| |
|
||||| |||||||||| | ||||||||||||||||||||| |||||||||||| |
|
|
| T |
33519053 |
taaataacctcttatttgccttcaaatgcaaagaaaataattaaaaacatagc |
33519001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 21167742 - 21167672
Alignment:
| Q |
7 |
taaatgacctcttattgtc-ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
|||||||| ||||||| || |||||||||||| |||||||||||||||| | |||| |||||||||||| |
|
|
| T |
21167742 |
taaatgacgtcttattttccttcaaatgcaaaacaaataactaaaaacatgacataaactatcatatgatg |
21167672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 5906837 - 5906902
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaa-atatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||| ||| ||||||||||||| | |||||| |
|
|
| T |
5906837 |
ttgtcttcaaatgcaaataaaagtactaaaaacatagcaaaaatatatcatatgatgtttcgtcat |
5906902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 10094301 - 10094354
Alignment:
| Q |
5 |
cataaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatag |
57 |
Q |
| |
|
|||||||||| | ||||| | ||||||||||||||||||||||| ||||||||| |
|
|
| T |
10094301 |
cataaatgacatattatttgccttcaaatgcaaagaaaataactgaaaacatag |
10094354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 1676412 - 1676476
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||| |||||||| || ||||| ||| || ||||| |||||||||||| |||||| |
|
|
| T |
1676412 |
ttgtcttcaaatgtaaagaaaagtacaaaaaatataaccaaaaatgtcatatgatgcttcgtcat |
1676476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 1682940 - 1683004
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||| |||||||| || ||||| ||| || ||||| |||||||||||| |||||| |
|
|
| T |
1682940 |
ttgtcttcaaatgtaaagaaaagtacaaaaaatataaccaaaaatgtcatatgatgcttcgtcat |
1683004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 76
Target Start/End: Complemental strand, 18444226 - 18444198
Alignment:
| Q |
48 |
aaaaacatagcctaaaatatcatatgatg |
76 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
18444226 |
aaaaacatagcctaaaatatcatatgatg |
18444198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 21077227 - 21077199
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaac |
53 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21077227 |
cttcaaatgcaaagaaaataactaaaaac |
21077199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 25188771 - 25188692
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaag-aaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||| |||||||| |
|
|
| T |
25188771 |
taaatgacctcttatttgtcttcaaatgcaaagaaaaataagtaaaaatatagcct-aaatatcatatgatgatccgtcat |
25188692 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 23909234 - 23909313
Alignment:
| Q |
7 |
taaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||| ||| |||||||| |||||||||||||||||||||||||| ||||| | ||||||||| |||| |||| |
|
|
| T |
23909234 |
taaatgacctctgatttgtcttcaagtgcaaagaaaataactaaaaacatagtctaaagtttcatatgattctccatcat |
23909313 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 8402671 - 8402731
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
8402671 |
cttcaaatgcaaagtaaatacataaaaacatagtctaaaatatcatatgatgctctgtcat |
8402731 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 31477692 - 31477771
Alignment:
| Q |
6 |
ataaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtca |
84 |
Q |
| |
|
|||||||| |||||||| ||||| |||| ||||||||||||||||||||||| ||||| |||||| ||||||| ||||| |
|
|
| T |
31477692 |
ataaatgatctcttatttgtctttaaatacaaagaaaataactaaaaacatatcctaatatatcaagtgatgcttcgtca |
31477771 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 21829234 - 21829303
Alignment:
| Q |
7 |
taaatgacctcttattgtc-ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgat |
75 |
Q |
| |
|
|||||||||||||||| || |||||||||||| ||||||| |||||| |||| | ||||||||||||||| |
|
|
| T |
21829234 |
taaatgacctcttattttccttcaaatgcaaataaaataaataaaaatatagtcaaaaatatcatatgat |
21829303 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 13911263 - 13911199
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||| |||||||||| |||| ||||||||| |
|
|
| T |
13911263 |
ttgtcttcaaatacaaagaaaattactaaaaacatagaaaaaaatatcatttgattctccgtcat |
13911199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 7652241 - 7652204
Alignment:
| Q |
28 |
caaatgcaaagaaaataactaaaaacatagcctaaaat |
65 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7652241 |
caaatgcaaagaaaataactaaaaacatagccaaaaat |
7652204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 25919581 - 25919645
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||| || ||||||||||||||||||| |||| |
|
|
| T |
25919581 |
ttgtcttcaaattcaaagaaatgtactaaaaacataaccagaaatatcatatgatgctccatcat |
25919645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 7652207 - 7652129
Alignment:
| Q |
8 |
aaatgacctcttatt-gtcttcaaatgcaaagaaaataactaaaaacatagc-ctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||| ||||||| | ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| |||| |
|
|
| T |
7652207 |
aaatgacatcttatttgccttcaaatgcaaagaaaataact-aaaacatagcaaaaaaatatcatatgatgttccatcat |
7652129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 33577750 - 33577680
Alignment:
| Q |
4 |
tcataaatgacctcttattg-tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatga |
74 |
Q |
| |
|
|||||||| |||||||||| |||| |||| |||||||||||| |||| ||||| ||||||||||||||||| |
|
|
| T |
33577750 |
tcataaataacctcttatttatctt-aaatacaaagaaaataagtaaacacataccctaaaatatcatatga |
33577680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 16970238 - 16970177
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtc |
83 |
Q |
| |
|
|||| ||||||| ||||||||| ||||||||||||| | ||||||||||||| ||||||||| |
|
|
| T |
16970238 |
ttgtgttcaaatacaaagaaaagcactaaaaacatagtcaaaaatatcatatg-tgctccgtc |
16970177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 11474833 - 11474780
Alignment:
| Q |
32 |
tgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||| |||| ||| || ||||||||||||||| ||| |||| |
|
|
| T |
11474833 |
tgcaaagaaaataactataaacgtagtctgaaatatcatatgatgttccatcat |
11474780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 19219331 - 19219392
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
|||||||| |||||||||| |||||||||| ||| ||| |||||||||||||| |||||| |
|
|
| T |
19219331 |
tcttcaaaagcaaagaaaaatactaaaaacacagctaaaagtatcatatgatgcttcgtcat |
19219392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 17637101 - 17637037
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||| || | ||||||||| | || |||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
17637101 |
ttgtctttaattacaaagaaaagtaatataaacatagccaaaaatgtcatatgatgctccgtcat |
17637037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 18065827 - 18065763
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||| |||||||||||| || || |||||||||||| ||||| ||| || |||| ||||||| |
|
|
| T |
18065827 |
ttgtctttaaatgcaaagaatattaccaaaaacatagccaaaaatgtcacataatgccccgtcat |
18065763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 21017872 - 21017816
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagc-ctaaaatatcatatgatgctc |
79 |
Q |
| |
|
||||||||||||||||||| |||||||||||| | ||||||||||||||||||| |
|
|
| T |
21017872 |
tcttcaaatgcaaagaaaaatactaaaaacataacaaaaaaatatcatatgatgctc |
21017816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0438 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0438
Description:
Target: scaffold0438; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 2277 - 2336
Alignment:
| Q |
26 |
ttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| || |||||||||| |||| |||| |
|
|
| T |
2277 |
ttcaaatgcaaagaaaataacaaaaaacatagcctacaacatcatatgatactccctcat |
2336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0188 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0188
Description:
Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 27074 - 27128
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgct |
78 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| |
|
|
| T |
27074 |
tcttcaaatgcaaagaaaagtactaaaaacatagccgaaaatatcatgtgatgct |
27128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:
Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 21392 - 21336
Alignment:
| Q |
24 |
tcttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatgatgctcc |
80 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
21392 |
tcttcaaatgcaaagaaaaacactaaaaacataataaaaaatatcatatgatgctcc |
21336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 447003 - 446939
Alignment:
| Q |
21 |
ttgtcttcaaatgcaaag-aaaataactaaaaacatagcctaaaatatcatatgatgctccgtcat |
85 |
Q |
| |
|
||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
447003 |
ttgtcttcaaatgtaaaggaaaagtactaaaaacatagca-aaaatatcatatgatgctctgtcat |
446939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1026
Description:
Target: scaffold1026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 57
Target Start/End: Original strand, 1956 - 1984
Alignment:
| Q |
29 |
aaatgcaaagaaaataactaaaaacatag |
57 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1956 |
aaatgcaaagaaaataactaaaaacatag |
1984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 58739 - 58691
Alignment:
| Q |
25 |
cttcaaatgcaaagaaaataactaaaaacatagcctaaaatatcatatg |
73 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||| |||| |||||||| |
|
|
| T |
58739 |
cttcaaatgcatagaaaataaccaaaaacatagctaaaaacatcatatg |
58691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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