View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10671_low_33 (Length: 285)
Name: NF10671_low_33
Description: NF10671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10671_low_33 |
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Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 20 - 274
Target Start/End: Original strand, 49168680 - 49168934
Alignment:
| Q |
20 |
agaggggatcattttatttgcttggatggattgtggggacaagaggaaactccagtttctatagtaaatgtatatgcaccttgtaaggcggggaggaaaa |
119 |
Q |
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| T |
49168680 |
agaggggatcattttatttgcttggatggattgtggggacaagaggaaactccagtttctatagtaaatgtatatgcaccttgtaaggcggggaggaaaa |
49168779 |
T |
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| Q |
120 |
gatctgtgggataagttgaaagatttaatattgttgaaaccaggggaaaaatggtgtgaaatcagcgatttcaaatccatcggaacatctttagagagga |
219 |
Q |
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| T |
49168780 |
gatctgtgggataagttgaaagatttaatattgttgaaaccaggggaaaaatggtgtgaactcagcgatttcaaatccatcggaacatctttagagagga |
49168879 |
T |
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| Q |
220 |
aaggaactggtgattttaaaagaatggaagagatgttggcctttaactcgttcat |
274 |
Q |
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| T |
49168880 |
aaggaactggtgattttaaaagaatggaagagatgttggcctttaactcgttcat |
49168934 |
T |
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