View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10671_low_4 (Length: 472)

Name: NF10671_low_4
Description: NF10671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10671_low_4
NF10671_low_4
[»] chr1 (45 HSPs)
chr1 (15-456)||(7743154-7743595)
chr1 (143-261)||(31794222-31794340)
chr1 (143-262)||(16893393-16893512)
chr1 (143-261)||(6122794-6122912)
chr1 (163-261)||(12259260-12259358)
chr1 (143-261)||(21547438-21547556)
chr1 (150-261)||(51814494-51814605)
chr1 (143-261)||(25297772-25297890)
chr1 (186-259)||(33700774-33700847)
chr1 (186-261)||(8904414-8904489)
chr1 (190-265)||(9165200-9165275)
chr1 (147-262)||(44961764-44961879)
chr1 (143-250)||(52336732-52336839)
chr1 (143-261)||(4566548-4566665)
chr1 (143-261)||(6650595-6650713)
chr1 (143-237)||(12587294-12587387)
chr1 (144-262)||(17745216-17745333)
chr1 (143-261)||(40257399-40257517)
chr1 (169-258)||(15786304-15786393)
chr1 (143-263)||(10526821-10526941)
chr1 (169-261)||(36371470-36371562)
chr1 (147-262)||(50901580-50901695)
chr1 (186-261)||(8177183-8177258)
chr1 (186-261)||(16169979-16170054)
chr1 (186-261)||(19528328-19528403)
chr1 (147-262)||(52116743-52116858)
chr1 (143-261)||(952511-952629)
chr1 (146-260)||(44126396-44126510)
chr1 (143-219)||(7219876-7219952)
chr1 (144-228)||(9879471-9879555)
chr1 (182-258)||(9964441-9964517)
chr1 (186-254)||(17410238-17410306)
chr1 (143-226)||(1600250-1600333)
chr1 (186-261)||(2799862-2799937)
chr1 (143-222)||(31383756-31383835)
chr1 (147-254)||(42983336-42983443)
chr1 (143-262)||(48619167-48619286)
chr1 (143-261)||(21267951-21268069)
chr1 (143-208)||(2220025-2220090)
chr1 (143-263)||(1094523-1094643)
chr1 (158-202)||(8254854-8254898)
chr1 (143-263)||(14787294-14787414)
chr1 (147-219)||(15065007-15065079)
chr1 (143-175)||(28180845-28180877)
chr1 (186-262)||(51703778-51703854)
[»] chr3 (43 HSPs)
chr3 (325-453)||(40864990-40865118)
chr3 (15-114)||(40864833-40864932)
chr3 (143-267)||(10499067-10499191)
chr3 (143-254)||(2667869-2667980)
chr3 (160-262)||(14186647-14186748)
chr3 (143-223)||(49397499-49397579)
chr3 (143-262)||(14339609-14339728)
chr3 (143-262)||(51903836-51903955)
chr3 (143-261)||(11642167-11642285)
chr3 (147-261)||(36720381-36720495)
chr3 (164-261)||(4222141-4222238)
chr3 (143-263)||(10445097-10445218)
chr3 (186-263)||(49494147-49494224)
chr3 (143-228)||(52769941-52770026)
chr3 (146-254)||(4844472-4844580)
chr3 (146-254)||(4870168-4870276)
chr3 (182-261)||(203090-203169)
chr3 (147-261)||(2597181-2597296)
chr3 (143-254)||(8075085-8075196)
chr3 (143-262)||(8170671-8170790)
chr3 (147-262)||(16991541-16991656)
chr3 (186-261)||(27093362-27093437)
chr3 (186-261)||(30311306-30311381)
chr3 (143-261)||(31520563-31520681)
chr3 (159-261)||(31788945-31789046)
chr3 (143-261)||(46518628-46518746)
chr3 (143-260)||(47454575-47454692)
chr3 (143-208)||(54990755-54990820)
chr3 (186-262)||(28703405-28703481)
chr3 (150-222)||(33899653-33899725)
chr3 (143-258)||(13808843-13808958)
chr3 (182-261)||(15048058-15048137)
chr3 (186-261)||(37788466-37788541)
chr3 (145-228)||(44743815-44743898)
chr3 (143-262)||(12761511-12761630)
chr3 (186-261)||(16354893-16354968)
chr3 (187-253)||(11612307-11612373)
chr3 (234-263)||(8796141-8796170)
chr3 (143-220)||(44069799-44069876)
chr3 (143-267)||(7673263-7673387)
chr3 (143-195)||(7973622-7973674)
chr3 (186-262)||(35111179-35111255)
chr3 (143-199)||(36015510-36015566)
[»] chr7 (43 HSPs)
chr7 (147-261)||(45709670-45709784)
chr7 (143-256)||(41519223-41519335)
chr7 (143-262)||(15137552-15137671)
chr7 (144-261)||(20335790-20335907)
chr7 (147-263)||(24513795-24513911)
chr7 (143-261)||(30579335-30579453)
chr7 (186-262)||(26459411-26459487)
chr7 (143-261)||(41487362-41487477)
chr7 (143-262)||(43590906-43591025)
chr7 (147-262)||(48771937-48772052)
chr7 (143-261)||(2446308-2446426)
chr7 (143-261)||(25590611-25590729)
chr7 (186-263)||(18363694-18363771)
chr7 (186-262)||(22760862-22760938)
chr7 (147-263)||(41519072-41519188)
chr7 (143-222)||(9183149-9183228)
chr7 (143-258)||(15905632-15905746)
chr7 (186-261)||(23552118-23552193)
chr7 (143-262)||(30442487-30442604)
chr7 (150-257)||(42711962-42712069)
chr7 (192-263)||(42836008-42836079)
chr7 (143-261)||(17040970-17041088)
chr7 (147-260)||(35513467-35513580)
chr7 (186-263)||(39631842-39631919)
chr7 (158-262)||(7801179-7801283)
chr7 (213-260)||(22927477-22927524)
chr7 (186-261)||(23301603-23301678)
chr7 (186-261)||(43215184-43215259)
chr7 (143-258)||(43663053-43663168)
chr7 (143-221)||(7309396-7309473)
chr7 (143-220)||(2882991-2883067)
chr7 (143-208)||(21558181-21558246)
chr7 (143-223)||(27313692-27313772)
chr7 (186-254)||(37085550-37085618)
chr7 (195-262)||(25021345-25021412)
chr7 (186-261)||(25655229-25655304)
chr7 (186-261)||(35119383-35119458)
chr7 (143-202)||(37473673-37473732)
chr7 (144-202)||(4572256-4572314)
chr7 (193-259)||(21854550-21854616)
chr7 (143-259)||(29385701-29385817)
chr7 (147-259)||(44628146-44628257)
chr7 (234-262)||(45559199-45559227)
[»] scaffold0258 (1 HSPs)
scaffold0258 (143-261)||(15281-15399)
[»] chr5 (31 HSPs)
chr5 (143-261)||(16773807-16773925)
chr5 (143-262)||(29075780-29075899)
chr5 (143-262)||(6844728-6844847)
chr5 (143-261)||(22737082-22737200)
chr5 (146-263)||(17028225-17028342)
chr5 (169-262)||(25627056-25627149)
chr5 (143-267)||(3252247-3252371)
chr5 (146-262)||(14495766-14495882)
chr5 (143-262)||(8278233-8278352)
chr5 (143-261)||(22020820-22020938)
chr5 (147-220)||(29173531-29173604)
chr5 (143-261)||(21589288-21589406)
chr5 (186-261)||(87424-87499)
chr5 (143-254)||(1410619-1410728)
chr5 (158-257)||(43241655-43241754)
chr5 (143-222)||(43442235-43442314)
chr5 (143-208)||(24907542-24907607)
chr5 (186-258)||(18437088-18437160)
chr5 (190-262)||(19043457-19043529)
chr5 (186-261)||(14285161-14285236)
chr5 (186-257)||(16436622-16436692)
chr5 (144-261)||(18169793-18169905)
chr5 (186-261)||(21549138-21549213)
chr5 (186-261)||(26078052-26078127)
chr5 (190-261)||(30883203-30883274)
chr5 (186-261)||(34984806-34984881)
chr5 (144-202)||(35705045-35705103)
chr5 (234-263)||(7918518-7918547)
chr5 (186-261)||(5390853-5390926)
chr5 (143-199)||(10054109-10054165)
chr5 (186-258)||(14804671-14804743)
[»] chr8 (30 HSPs)
chr8 (147-261)||(968362-968476)
chr8 (153-262)||(23361617-23361726)
chr8 (143-261)||(16852340-16852458)
chr8 (143-261)||(44780072-44780190)
chr8 (143-264)||(3624577-3624697)
chr8 (143-262)||(11819775-11819894)
chr8 (143-259)||(2203494-2203610)
chr8 (186-261)||(19703488-19703563)
chr8 (147-261)||(20994419-20994534)
chr8 (143-261)||(8059632-8059750)
chr8 (143-261)||(8484999-8485117)
chr8 (143-261)||(18540298-18540416)
chr8 (143-261)||(28783060-28783178)
chr8 (143-261)||(29431011-29431129)
chr8 (143-260)||(29858007-29858124)
chr8 (143-261)||(4830487-4830605)
chr8 (186-263)||(27750728-27750805)
chr8 (169-261)||(6569755-6569847)
chr8 (158-250)||(35690037-35690129)
chr8 (186-261)||(3826778-3826853)
chr8 (143-262)||(11518835-11518954)
chr8 (190-261)||(30483889-30483960)
chr8 (186-261)||(35641902-35641977)
chr8 (146-220)||(6536561-6536635)
chr8 (143-177)||(7347921-7347955)
chr8 (189-263)||(23874386-23874460)
chr8 (168-254)||(42740501-42740587)
chr8 (144-261)||(3058009-3058125)
chr8 (143-228)||(3305146-3305231)
chr8 (143-223)||(16843753-16843832)
[»] chr6 (15 HSPs)
chr6 (147-261)||(33549104-33549218)
chr6 (143-260)||(6758380-6758497)
chr6 (146-262)||(12633008-12633124)
chr6 (147-261)||(12234469-12234583)
chr6 (143-261)||(21418470-21418588)
chr6 (143-261)||(31622949-31623067)
chr6 (143-262)||(1056643-1056762)
chr6 (186-261)||(12188304-12188379)
chr6 (142-261)||(14557962-14558080)
chr6 (143-262)||(30127399-30127518)
chr6 (186-262)||(11423565-11423641)
chr6 (147-262)||(3715451-3715566)
chr6 (143-250)||(28363948-28364055)
chr6 (145-259)||(32613100-32613214)
chr6 (158-202)||(12216803-12216847)
[»] chr4 (37 HSPs)
chr4 (143-261)||(7949412-7949530)
chr4 (143-263)||(28635694-28635814)
chr4 (143-254)||(49576852-49576963)
chr4 (147-261)||(21660106-21660220)
chr4 (147-261)||(21668870-21668984)
chr4 (186-262)||(37109352-37109428)
chr4 (186-261)||(19680789-19680864)
chr4 (143-261)||(8030162-8030280)
chr4 (143-241)||(51954134-51954232)
chr4 (186-262)||(19238578-19238654)
chr4 (147-263)||(31826607-31826723)
chr4 (143-262)||(37274417-37274537)
chr4 (143-263)||(46545709-46545829)
chr4 (142-261)||(37720171-37720290)
chr4 (147-261)||(18404845-18404959)
chr4 (147-261)||(51250484-51250598)
chr4 (186-263)||(47044715-47044792)
chr4 (150-262)||(9936926-9937038)
chr4 (186-262)||(31759659-31759735)
chr4 (143-262)||(45060977-45061096)
chr4 (150-261)||(55427165-55427276)
chr4 (186-261)||(2622396-2622475)
chr4 (150-244)||(13015444-13015538)
chr4 (147-262)||(37443701-37443813)
chr4 (213-261)||(27965538-27965586)
chr4 (186-246)||(38869783-38869843)
chr4 (186-261)||(4249177-4249252)
chr4 (188-263)||(9241028-9241103)
chr4 (186-261)||(39509070-39509145)
chr4 (143-257)||(13901746-13901860)
chr4 (182-228)||(24124052-24124098)
chr4 (143-257)||(24234649-24234762)
chr4 (144-202)||(47386750-47386808)
chr4 (146-199)||(30584783-30584836)
chr4 (143-244)||(30938177-30938278)
chr4 (186-258)||(7292799-7292871)
chr4 (182-238)||(42644907-42644963)
[»] scaffold0118 (1 HSPs)
scaffold0118 (143-262)||(41591-41710)
[»] chr2 (43 HSPs)
chr2 (143-261)||(29503271-29503388)
chr2 (147-261)||(42327357-42327471)
chr2 (143-261)||(1435064-1435181)
chr2 (143-261)||(42602554-42602672)
chr2 (143-261)||(11251087-11251205)
chr2 (143-261)||(37480075-37480193)
chr2 (186-263)||(4438980-4439057)
chr2 (186-261)||(14500277-14500352)
chr2 (147-262)||(28846690-28846805)
chr2 (186-261)||(34041589-34041664)
chr2 (186-261)||(39714992-39715067)
chr2 (147-257)||(3001383-3001493)
chr2 (143-228)||(25637184-25637269)
chr2 (143-208)||(38854420-38854485)
chr2 (197-261)||(1729816-1729880)
chr2 (186-262)||(23052524-23052600)
chr2 (143-219)||(33582015-33582091)
chr2 (186-262)||(40416391-40416467)
chr2 (143-261)||(7798994-7799111)
chr2 (186-260)||(16918579-16918653)
chr2 (147-261)||(21195638-21195752)
chr2 (151-261)||(26545840-26545950)
chr2 (143-261)||(29197334-29197452)
chr2 (186-263)||(11062358-11062435)
chr2 (148-261)||(19244109-19244222)
chr2 (143-208)||(38856120-38856185)
chr2 (186-270)||(5147680-5147764)
chr2 (144-200)||(31573600-31573656)
chr2 (143-219)||(35203341-35203417)
chr2 (186-261)||(42922414-42922490)
chr2 (182-261)||(11738041-11738120)
chr2 (158-261)||(35916086-35916189)
chr2 (169-263)||(13803493-13803587)
chr2 (143-253)||(21213777-21213887)
chr2 (143-208)||(2311777-2311842)
chr2 (162-254)||(9776313-9776403)
chr2 (186-263)||(12994377-12994454)
chr2 (186-263)||(32687479-32687556)
chr2 (143-260)||(37755929-37756046)
chr2 (143-200)||(37971956-37972013)
chr2 (143-220)||(41908596-41908673)
chr2 (235-263)||(16381704-16381732)
chr2 (186-261)||(33569859-33569935)
[»] scaffold0211 (1 HSPs)
scaffold0211 (146-261)||(24053-24168)
[»] scaffold0032 (1 HSPs)
scaffold0032 (147-261)||(112282-112396)
[»] scaffold0194 (1 HSPs)
scaffold0194 (160-257)||(13021-13118)
[»] scaffold0122 (1 HSPs)
scaffold0122 (143-254)||(6880-6988)
[»] scaffold0002 (1 HSPs)
scaffold0002 (182-258)||(94968-95044)
[»] scaffold0070 (1 HSPs)
scaffold0070 (143-261)||(42479-42596)
[»] scaffold0299 (1 HSPs)
scaffold0299 (186-255)||(11534-11603)
[»] scaffold0115 (1 HSPs)
scaffold0115 (143-208)||(42622-42687)
[»] scaffold0471 (1 HSPs)
scaffold0471 (182-228)||(8639-8685)
[»] scaffold0126 (1 HSPs)
scaffold0126 (143-244)||(25305-25406)


Alignment Details
Target: chr1 (Bit Score: 350; Significance: 0; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 15 - 456
Target Start/End: Original strand, 7743154 - 7743595
Alignment:
Q  15 gggtcagacttgcaaatcagatcagctattgctcttgatcatctcaaaaactatatatatgtcgaagcagataaagaagctcatgttagagaggtattgt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7743154 gggtcagacttgcaaatcagatcagctattgctcttgatcatctcaaaaactatatatatgtcgaagcagataaagaagctcatgttagagaggtattgt 7743253  T
Q  115 attgtgtcaaatatctactgnnnnnnn-gtttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagacc 213  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||    
T  7743254 attgtgtcaaatatctactgttttttttgtttgaagaagctaagttagcccacctaaattgacattttagataatcgaacttgagacctagaggaggacc 7743353  T
Q  214 acactcccaaatccctagttaataccactaggccaacccaagtgggttatgaaatatctattgttgtttatcacacatacatcatatgatagaattgtca 313  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7743354 acactcccaaattcctagttaataccactaggccaacccaagtgggttatgaaatatctattgttgtttatcacacatacatcatatgataaaattgtca 7743453  T
Q  314 acnnnnnnnnacatgtgtttcaggcttgcaaaggtcttcgcaatatatttggacgacaaataactcttgttccaatgagagaaatgactaatgtgctgtc 413  Q
    ||        ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  7743454 acttttttttacatgtgtttcaggcttgcaaaggtcttcgcaatata-ttggacgacaaataactcttgttccaataagagaaatgactgatgtgctgtc 7743552  T
Q  414 agttgaaagcaaggccattgatcttgctagagatacttggatt 456  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7743553 agttgaaagcaaggccattgatcttgctagagatacttggatt 7743595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 31794222 - 31794340
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| ||||||||| |  ||  ||||||||   |||||| ||||| || ||||||||||| |||| ||  |||||||||    
T  31794222 tttgaagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccact 31794321  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  31794322 aggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 16893512 - 16893393
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| ||||||||||||||||| ||||| ||  ||||||||||||| | ||  |||||||      
T  16893512 tttgaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaac 16893413  T
Q  243 aggccaacccaagtgggtta 262  Q
    ||| ||||||||||||||||    
T  16893412 aggtcaacccaagtgggtta 16893393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 6122912 - 6122794
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| |||||||||    ||  ||||||||||||||||| ||||| || ||||||||||| |||| ||   ||||||||    
T  6122912 tttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 6122813  T
Q  243 aggccaacccaagtgggtt 261  Q
    ||| |||||||| ||||||    
T  6122812 agggcaacccaaatgggtt 6122794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 12259358 - 12259260
Alignment:
Q  163 ccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||| |||||||||||   || |||||||| |||||| | ||||| || |||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  12259358 ccacccaaattgacatcggtgagaatcgaacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 21547438 - 21547556
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||| |||  |||||||||||||||| ||||  ||| |||||||||||| |||| ||||| || ||| ||||||  |||| ||  |||||||||    
T  21547438 tttgaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccact 21547537  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||| ||||    
T  21547538 aggccaacccaagtcggtt 21547556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 51814605 - 51814494
Alignment:
Q  150 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 249  Q
    ||||||| |||||||||| |||||| || |  ||| ||||||||||||||||| ||||| || ||||||| || ||| | ||| |||||||  |||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaa 51814506  T
Q  250 cccaagtgggtt 261  Q
    ||||||||||||    
T  51814505 cccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 25297890 - 25297772
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||| |||||||||||||||  |   || |||| ||||| |||||| ||||| || ||||||| || ||||  ||| |||||||||    
T  25297890 tttgaagaagctaaattatcccacctaaattgacgccggtgagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccact 25297791  T
Q  243 aggccaacccaagtgggtt 261  Q
    || ||||||||||||||||    
T  25297790 agaccaacccaagtgggtt 25297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 33700774 - 33700847
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtggg 259  Q
    ||||||||||||||||| ||||| || |||||||||| || || ||  ||||||||||||||||||||||||||    
T  33700774 aatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 8904489 - 8904414
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||| |||||||| ||||| || ||||||| || ||||| ||| ||||| ||||||||||||||||||||||    
T  8904489 aatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 9165200 - 9165275
Alignment:
Q  190 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttatga 265  Q
    ||||||||||| | ||||| || ||||||||||  |||| ||  ||||||||||||||||||||||||||||||||    
T  9165200 gaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttatga 9165275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 44961879 - 44961764
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||||||||| |||||||||    ||| ||||||||||||||||  ||||| || |||||||  ||||| | || |||||||||  | |    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgac 44961780  T
Q  247 caacccaagtgggtta 262  Q
    ||||||||||||||||    
T  44961779 caacccaagtgggtta 44961764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 52336732 - 52336839
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||  ||| |||||||| | ||||||||| |  |||||||||||||||||| ||  |||| || |||||||||| ||||| ||  |||||||||    
T  52336732 tttgaagaaattaaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccact 52336831  T
Q  243 aggccaac 250  Q
    ||||||||    
T  52336832 aggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 4566665 - 4566548
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  || ||| | ||||||||||||  ||| ||||||||||||||||  ||||| || ||||||||||  | || ||  |||| ||||    
T  4566665 tttgaagaagctaaactaaccc-cttaaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcact 4566567  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  4566566 aggccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 6650713 - 6650595
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  ||  ||||||||||||||| |  ||| ||||||||||||||| | ||||| || || ||||||  ||||| ||  |||||||||    
T  6650713 tttgaagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccact 6650614  T
Q  243 aggccaacccaagtgggtt 261  Q
    ||||||||| || ||||||    
T  6650613 aggccaacctaattgggtt 6650595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 12587387 - 12587294
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaata 237  Q
    |||||||||||||| ||||||||||||||||| || |  ||| ||||||||||||||||| ||||| || ||||||| || ||||| ||| ||||    
T  12587387 tttgaagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 17745216 - 17745333
Alignment:
Q  144 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 243  Q
    ||||||||||||| ||| || ||||||||||||| |  ||| |||||||| |||||||| ||||| || ||||| | ||  |||| ||  ||||||||||    
T  17745216 ttgaagaagctaaattaacc-acctaaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccacta 17745314  T
Q  244 ggccaacccaagtgggtta 262  Q
    |||||||||||||| ||||    
T  17745315 ggccaacccaagtgcgtta 17745333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 40257517 - 40257399
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  ||||||||| ||||||||| |  | | ||| |||| |||||||| ||||| || ||||||||||  || | ||  ||||||||     
T  40257517 tttgaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccacc 40257418  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  40257417 aggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 15786304 - 15786393
Alignment:
Q  169 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 258  Q
    ||||||||| |  ||| ||||||||||||||||| ||||| || |||||||||| ||||| ||  ||||| ||||| |||||||||||||    
T  15786304 aaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 263
Target Start/End: Complemental strand, 10526941 - 10526821
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||| |||||| ||||||||  |  ||| ||||||| ||||||||| ||||| || || |||||||  |||| ||  |||||||||    
T  10526941 tttgaagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T
Q  243 aggccaacccaagtgggttat 263  Q
     | ||||||||| ||||||||    
T  10526841 ggaccaacccaaatgggttat 10526821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 261
Target Start/End: Complemental strand, 36371562 - 36371470
Alignment:
Q  169 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||| ||||  ||| |||||||||| |||||| ||||| || ||||||||||  | || ||  ||||||||||||||||||||||||||||    
T  36371562 aaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 50901695 - 50901580
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaat-accactagg 245  Q
    |||||||||| ||||||||||||||||| || |  ||| |||||||  |||||||| ||||| || |||||| |||  |||| ||  ||| |||||||||    
T  50901695 aagaagctaaattagcccacctaaattggca-ctgagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactagg 50901597  T
Q  246 ccaacccaagtgggtta 262  Q
    |||||||||||||||||    
T  50901596 ccaacccaagtgggtta 50901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 8177183 - 8177258
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||| |||| ||||| || |||||||||| ||||| ||  ||||||||||||||||| ||| ||||||    
T  8177183 aatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggtt 8177258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 16169979 - 16170054
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||| |||| ||||| || ||||||||||  |||| ||| |||||||| |||| ||||||||||||||    
T  16169979 aatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 19528328 - 19528403
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || |||||||  | ||||| ||  |||||||| |||||||||||||||||||    
T  19528328 aatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 52116743 - 52116858
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| ||||||||||| ||||| ||     || ||| ||||||||||| | ||||| || ||||||||||| |||| ||  |||||||| ||||    
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggc 52116842  T
Q  247 caacccaagtgggtta 262  Q
    |||||||| |||||||    
T  52116843 caacccaactgggtta 52116858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 952629 - 952511
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||| |||||||| ||| ||||||||||||||||||   || |||| |||||||||| | ||||| || ||||||||||  |||| ||  || |||||     
T  952629 tttgacgaagctaaattaacccacctaaattgacatcggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccacc 952530  T
Q  243 aggccaacccaagtgggtt 261  Q
    || ||||| ||||||||||    
T  952529 agaccaactcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 44126510 - 44126396
Alignment:
Q  146 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 245  Q
    ||||||||||| |||||| |||||||||| ||    ||| |||| || ||||||||| | ||| || ||||||||||  ||||  || |||||||| |||    
T  44126510 gaagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccagg 44126411  T
Q  246 ccaacccaagtgggt 260  Q
    |||||||||||||||    
T  44126410 ccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 7219876 - 7219952
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 219  Q
    |||||||||||||| |||| ||||||||||||  |||  ||| ||||||||||||||| | ||||| || |||||||    
T  7219876 tttgaagaagctaaattagtccacctaaattggtatcaaagagaatcgaacctgagacttcgaggaggagcacactc 7219952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 9879555 - 9879471
Alignment:
Q  144 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 228  Q
    ||||||||| ||| |||||||||| ||||||||||   ||||||||||| |||||||||  |||||||  |||||| || |||||    
T  9879555 ttgaagaagttaaattagcccacccaaattgacataagagataatcgaatctgagacctcaaggaagagtacactctcagatccc 9879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 9964517 - 9964441
Alignment:
Q  182 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 258  Q
    |||||||| |||||||||| | |||||||| |||||||||| ||||| ||| |||| ||  |||| |||||||||||    
T  9964517 agataatcaaacctgagacattgaggaagagcacactcccagatcccaagtcaataacatcaggctaacccaagtgg 9964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 17410306 - 17410238
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 254  Q
    |||||||| ||||| || ||||| ||||||||||||| ||||| |   |||||||||||||||||||||    
T  17410306 aatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 1600250 - 1600333
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatc 226  Q
    ||||||||||||||||||| ||| | ||||||||| |  ||| |||||||||||| || |  |||| || ||||||||||||||    
T  1600250 tttgaagaagctaagttagtccatccaaattgacaccagagagaatcgaacctgaaactttaaggaggagcacactcccaaatc 1600333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 2799937 - 2799862
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || |||||||||| ||| | ||   ||||||||||||||| | |||||||||    
T  2799937 aatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 31383756 - 31383835
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 222  Q
    |||||||||| |||||||||||||| |||||| || |  ||| ||||||||||||||||   |||| || ||||||||||    
T  31383756 tttgaagaaggtaagttagcccacccaaattggcacctaagagaatcgaacctgagaccccaaggaggagcacactccca 31383835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 42983336 - 42983443
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||| |||| ||||||| || |  ||| ||||||||||  |||||  |||| ||||||||||||| ||| | ||| |||||||| | ||    
T  42983336 aagaagctaaattagtccacttaaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccaccatgc 42983435  T
Q  247 caacccaa 254  Q
    ||||||||    
T  42983436 caacccaa 42983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 48619167 - 48619286
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||| ||| |||| ||||  ||||||||| |  ||||||| |||||||||| || |||||| | ||||||||||| || | ||| ||||||||     
T  48619167 tttgaagaagttaaattagtccactcaaattgacaccggagataatagaacctgagatcttgaggaaaaacacactcccaagtctcaagtcaataccacc 48619266  T
Q  243 aggccaacccaagtgggtta 262  Q
    |   ||||| ||||||||||    
T  48619267 atatcaacctaagtgggtta 48619286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 21267951 - 21268069
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||   ||||||  | |  ||| |||| ||||  |||||||||||| || ||||||||||| |||| ||  ||||| |||    
T  21267951 tttgaagaagctaaattagcccaaaaaaattggaaccagagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagccaatactact 21268050  T
Q  243 aggccaacccaagtgggtt 261  Q
    || ||||| ||||||||||    
T  21268051 agcccaactcaagtgggtt 21268069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 2220090 - 2220025
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 208  Q
    ||||||||| |||| ||||||||  |||||||||||   ||| ||||||||||||||||| |||||    
T  2220090 tttgaagaaactaaattagcccatttaaattgacattggagagaatcgaacctgagacctcgagga 2220025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 263
Target Start/End: Complemental strand, 1094643 - 1094523
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||| ||| ||||||||||||||||| || |  ||| |||||||  |||||||| | ||| || ||||||| ||  | || ||| |||||||      
T  1094643 tttgaagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaataccaac 1094544  T
Q  243 aggccaacccaagtgggttat 263  Q
    |  ||||||||||||||||||    
T  1094543 aaaccaacccaagtgggttat 1094523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 8254854 - 8254898
Alignment:
Q  158 ttagcccacctaaattgacatcctagataatcgaacctgagacct 202  Q
    |||||||||| ||||||||| |  |||||||||||||||||||||    
T  8254854 ttagcccaccgaaattgacaccagagataatcgaacctgagacct 8254898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 14787294 - 14787414
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  || ||||| |||||||| ||   ||| |||||||||||| |||| |||||  | ||||||| ||  || | ||| |||||||||    
T  14787294 tttgaagaagctaaactaacccacttaaattgatattagagagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtcaataccact 14787393  T
Q  243 aggccaacccaagtgggttat 263  Q
    ||| |||| |||||| |||||    
T  14787394 aggtcaactcaagtgagttat 14787414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 15065079 - 15065007
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 219  Q
    |||||||||| |||||||||| ||||||||| |   || ||| ||||||||||||| ||||| || |||||||    
T  15065079 aagaagctaaattagcccacccaaattgacaccggggaaaattgaacctgagaccttgaggatgagcacactc 15065007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 28180877 - 28180845
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattga 175  Q
    ||||||||| |||||||||||||||||||||||    
T  28180877 tttgaagaaactaagttagcccacctaaattga 28180845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 51703854 - 51703778
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    |||||||||||| || | ||||| || |||||||||| || || ||  ||||||||||| ||||||||| |||||||    
T  51703854 aatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtta 51703778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 7e-50; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 325 - 453
Target Start/End: Original strand, 40864990 - 40865118
Alignment:
Q  325 catgtgtttcaggcttgcaaaggtcttcgcaatatatttggacgacaaataactcttgttccaatgagagaaatgactaatgtgctgtcagttgaaagca 424  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||| || |||||||| |||||||||||| |||||||||||||||||||||    
T  40864990 catgtgtttcaggcttgcaaaggtcttcgcaatatatttggacaaaaaataacactcgttccaataagagaaatgactgatgtgctgtcagttgaaagca 40865089  T
Q  425 aggccattgatcttgctagagatacttgg 453  Q
    | |||||||||||||||||||||||||||    
T  40865090 aagccattgatcttgctagagatacttgg 40865118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 40864833 - 40864932
Alignment:
Q  15 gggtcagacttgcaaatcagatcagctattgctcttgatcatctcaaaaactatatatatgtcgaagcagataaagaagctcatgttagagaggtattgt 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  40864833 gggtcagaattgcaaatcagatcagctattgctcttgatcatctcaaaaactacatatatgtggaagcagataaagaagctcatgttagagaggtattgt 40864932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 10499067 - 10499191
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| |||||||||||  ||| |||||||||||||||||  ||||||| || ||||||| ||||| ||  ||||||||     
T  10499067 tttgaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccacc 10499166  T
Q  243 aggccaacccaagtgggttatgaaa 267  Q
    ||||||||||||||||||| |||||    
T  10499167 aggccaacccaagtgggttttgaaa 10499191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 2667980 - 2667869
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  |||||||||||||||||||    ||||||||||||||||||||| |||||||| |||||||||| ||||| ||  ||||||||     
T  2667980 tttgaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccacc 2667881  T
Q  243 aggccaacccaa 254  Q
    ||||||||||||    
T  2667880 aggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 14186748 - 14186647
Alignment:
Q  160 agcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtggg 259  Q
    |||||||||||||||||| |  ||| ||||||||||||||||| ||||| || |||||| |||  |||| ||  ||||||||||||||||||||||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaataccactaggccaacccaagtggg 14186650  T
Q  260 tta 262  Q
    |||    
T  14186649 tta 14186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 49397499 - 49397579
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaa 223  Q
    |||||||||||||| |||| |||||||||||||||||  |||||||||||| |||||||| |||||  | |||||||||||    
T  49397499 tttgaagaagctaaattagtccacctaaattgacatctaagataatcgaacatgagacctcgaggagaagcacactcccaa 49397579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 14339728 - 14339609
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||| ||||| ||     || ||||||||||||||| | ||||| || |||||||||||||||| ||  ||||||||     
T  14339728 tttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccacc 14339629  T
Q  243 aggccaacccaagtgggtta 262  Q
    ||||||| |||| |||||||    
T  14339628 aggccaatccaactgggtta 14339609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 51903836 - 51903955
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| ||||||||||||||||  ||||| || |||||||||| ||||| ||  |||||||      
T  51903836 tttgaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaac 51903935  T
Q  243 aggccaacccaagtgggtta 262  Q
    ||| ||||||| ||||||||    
T  51903936 aggtcaacccaggtgggtta 51903955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 11642167 - 11642285
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  || ||| | ||||||||||    ||||||||||||||||||||| ||||| || |||| || || ||||| |||| |||||| |    
T  11642167 tttgaagaagctaaactaaccctcttaaattgacactaaagataatcgaacctgagaccttgaggaggatcacaatctcagatcccaagtttataccagt 11642266  T
Q  243 aggccaacccaagtgggtt 261  Q
    ||||||| |||||||||||    
T  11642267 aggccaatccaagtgggtt 11642285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 36720495 - 36720381
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    ||||||||||   ||||||||||||||||||    ||| |||||||||||| |||| ||||| || |||||||||| ||||| ||  |||||||| || |    
T  36720495 aagaagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagac 36720396  T
Q  247 caacccaagtgggtt 261  Q
    |||||||||||||||    
T  36720395 caacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 261
Target Start/End: Complemental strand, 4222238 - 4222141
Alignment:
Q  164 cacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||||| |  ||| |||||||||| |||| | ||||| || |||||||||| ||||| ||  |||||||||| |||||||||||||||||    
T  4222238 cacctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 10445097 - 10445218
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaa-taccac 241  Q
    |||||||||||||| |||||||||  |||||  || |  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  || | ||||    
T  10445097 tttgaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccac 10445196  T
Q  242 taggccaacccaagtgggttat 263  Q
    ||||||||||||||||||||||    
T  10445197 taggccaacccaagtgggttat 10445218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 49494147 - 49494224
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    |||| |||||||||||| |||||||| |||||||||||||  | ||| ||||||||||||| |||||||||| |||||    
T  49494147 aatcaaacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtgagttat 49494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 52769941 - 52770026
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 228  Q
    |||||||||||||| ||||||||||||||||||||    ||| |||||||||||||||||  |||| || |||||||||| |||||    
T  52769941 tttgaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 4844472 - 4844580
Alignment:
Q  146 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 245  Q
    ||||||||||| |||||||||  |||||| || |  ||| |||||| |||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||     
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4844571  T
Q  246 ccaacccaa 254  Q
    |||||||||    
T  4844572 ccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 4870168 - 4870276
Alignment:
Q  146 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 245  Q
    ||||||||||| |||||||||  |||||| || |  ||| |||||| |||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||     
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4870267  T
Q  246 ccaacccaa 254  Q
    |||||||||    
T  4870268 ccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 203169 - 203090
Alignment:
Q  182 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||||| | ||||  ||||| | |||||||||  ||||| ||| ||||||||||||||||||||||||||||    
T  203169 agataatcgaacctcaaaccttaaggaaaagcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 2597181 - 2597296
Alignment:
Q  147 aagaagctaagttag-cccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 245  Q
    |||||||||| |||| |||||||||||| ||||  |||| | |||||||||||||||  |||| || |||||||| ||||||  ||  |||||||| ||     
T  2597181 aagaagctaaattagtcccacctaaatttacatagtagagattcgaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccaga 2597280  T
Q  246 ccaacccaagtgggtt 261  Q
    ||||||||||||||||    
T  2597281 ccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 8075085 - 8075196
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| |||||||||    ||  |||||||||||| |||| ||||| || ||||||||||| |||| ||   ||||||||    
T  8075085 tttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccact 8075184  T
Q  243 aggccaacccaa 254  Q
    ||| ||||||||    
T  8075185 agggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 8170790 - 8170671
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||  ||| |||||||||| ||||||||| |  ||  ||||||||||||||||| ||| | || ||||||||||| |  | ||  |||||||||    
T  8170790 tttgaagaatttaaattagcccacccaaattgacaccagaggaaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccact 8170691  T
Q  243 aggccaacccaagtgggtta 262  Q
    |||||||||||| |||||||    
T  8170690 aggccaacccaaatgggtta 8170671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 16991656 - 16991541
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| ||||||||| ||||||| ||||  ||| |||| || |||||||||  | |||||  ||||||||| ||||| ||  |||||||| ||||    
T  16991656 aagaagctaaattagcccacataaattggcatcggagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaataccaccaggc 16991557  T
Q  247 caacccaagtgggtta 262  Q
    |||||||| |||||||    
T  16991556 caacccaaatgggtta 16991541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 27093362 - 27093437
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||| |||||||||||| ||||| || ||||||||||| | || ||  ||||||||||||||||||||||||||||    
T  27093362 aatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 30311381 - 30311306
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||   ||||||||||||||||||| |||||||    
T  30311381 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 31520563 - 31520681
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| ||||||| |||||||||  |||||||||    ||| |||| ||||| |||||| ||||| || |||||||||| ||||| ||  ||| ||||     
T  31520563 tttgaaaaagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccacc 31520662  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  31520663 aggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 261
Target Start/End: Original strand, 31788945 - 31789046
Alignment:
Q  159 tagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 258  Q
    ||||||||| ||||||||| |  |||||||| ||||| | |||| ||||| || |||||||||| ||||| ||  |||| ||||||||||||||||||||    
T  31788945 tagcccacccaaattgaca-cagagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgg 31789043  T
Q  259 gtt 261  Q
    |||    
T  31789044 gtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 46518746 - 46518628
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  || ||| |  |||||| ||||  ||| |||| ||||||| |||| ||||| || |||||||||| ||||| ||  |||||||||    
T  46518746 tttgaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccact 46518647  T
Q  243 aggccaacccaagtgggtt 261  Q
    | |||||||||||||||||    
T  46518646 atgccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 47454575 - 47454692
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  || ||||||||||||| |||    || ||||||||||||||||| ||||| || |||||||| | ||| | ||  |||||||||    
T  47454575 tttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccact 47454674  T
Q  243 aggccaacccaagtgggt 260  Q
    ||  ||||||||||||||    
T  47454675 agaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 54990820 - 54990755
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 208  Q
    |||||||||||||| ||||||||||||||||| ||||   || ||||||||||||||||| |||||    
T  54990820 tttgaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgagga 54990755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 28703405 - 28703481
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||||||||||||| || || || |||||||||| ||||| || ||||| |||| | |||||||||||||||||    
T  28703405 aatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtta 28703481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 33899725 - 33899653
Alignment:
Q  150 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 222  Q
    ||||||| ||||| |||| ||||||||| |  ||| ||||||||||||||||||||||| || ||||||||||    
T  33899725 aagctaaattagcacacccaaattgacaccaaagagaatcgaacctgagacctagaggaggagcacactccca 33899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 13808843 - 13808958
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||  ||| | ||||||||||   ||| ||| ||||||||||||||||||| || |||||| ||| ||||| ||| ||||  ||     
T  13808843 tttgaagaagctaaattaatccatccaaattgacattagagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagacc 13808942  T
Q  243 aggccaacccaagtgg 258  Q
    || |||||||||||||    
T  13808943 agaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 15048058 - 15048137
Alignment:
Q  182 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||||||| ||||| || |||| ||||| ||||| ||   |||||| || |||||||||||||||||    
T  15048058 agataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 37788466 - 37788541
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || |||||||| |  | || ||| ||||||||| ||||||||||||||||||    
T  37788466 aatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 44743815 - 44743898
Alignment:
Q  145 tgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 228  Q
    |||||||||||| ||| |||||| |||||| ||    ||||||||||||||||||||| ||||| || |||||||||| |||||    
T  44743815 tgaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatccc 44743898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 12761630 - 12761511
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||| ||  |||||||||||||||| || |   || |||||||||||||| ||  |||| || ||||||||||  |||| ||| ||||||||     
T  12761630 tttgaagaagcaaaactagcccacctaaattggcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccacc 12761531  T
Q  243 aggccaacccaagtgggtta 262  Q
    || |||||||| | ||||||    
T  12761530 agaccaacccatgcgggtta 12761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 16354893 - 16354968
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||  ||||| || ||||||| ||  | || ||  ||||||||||||||||||||||||||||    
T  16354893 aatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 11612373 - 11612307
Alignment:
Q  187 atcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaaccca 253  Q
    ||||||||||||||||  |||| || ||||||||||  |||| ||| |||||||| |||||||||||    
T  11612373 atcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 263
Target Start/End: Original strand, 8796141 - 8796170
Alignment:
Q  234 aataccactaggccaacccaagtgggttat 263  Q
    ||||||||||||||||||||||||||||||    
T  8796141 aataccactaggccaacccaagtgggttat 8796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 44069876 - 44069799
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 220  Q
    ||||||||||||||  |||||||||||||||| || |  | | |||| |||||||||||| ||||| || ||||||||    
T  44069876 tttgaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactcc 44069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 7673387 - 7673263
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||| |||| |||| |||  |||||||||||   |||  ||||||||| |||||| ||| |  | |||||| ||||||||| ||| ||||||||     
T  7673387 tttgaagaatctaaattagtccatttaaattgacattagagagtatcgaacctaagaccttgagaataagcacacttccaaatcccaagtcaataccacc 7673288  T
Q  243 aggccaacccaagtgggttatgaaa 267  Q
    || |||||| || |||||| |||||    
T  7673287 agaccaacctaactgggttgtgaaa 7673263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 7973674 - 7973622
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacct 195  Q
    |||||||||||||| |||| ||||| |||||||||||  ||| ||||||||||    
T  7973674 tttgaagaagctaaattagtccacccaaattgacatcagagagaatcgaacct 7973622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 35111255 - 35111179
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    |||||||| |||||||| ||||| || ||||||||||  || | | | ||| |||||||||||| ||||||||||||    
T  35111255 aatcgaacatgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggtta 35111179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 36015566 - 36015510
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgaga 199  Q
    ||||||||||| || |||||||||||||||||||| |  ||| ||||| ||||||||    
T  36015566 tttgaagaagcaaaattagcccacctaaattgacaccgaagagaatcgtacctgaga 36015510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 45709670 - 45709784
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    ||||||||||||||||||||||||||||  |||  ||||||||||||||||||||| ||||| || ||||||| || ||||| || ||||||||||||||    
T  45709670 aagaagctaagttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggc 45709769  T
Q  247 caacccaagtgggtt 261  Q
    |||||||| ||||||    
T  45709770 caacccaaatgggtt 45709784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 41519223 - 41519335
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||||||||||||| |  ||| || |||||||||||||| ||||| || |||||||| ||||||| ||| |||||||||    
T  41519223 tttgaagaagctaaattagcccacctaaattgaca-cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccact 41519321  T
Q  243 aggccaacccaagt 256  Q
    ||||||||||||||    
T  41519322 aggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 15137671 - 15137552
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||| |||| |||||||||| ||||||||| |  ||| |||| |||||||||||| ||||| || |||||||| ||||||| ||| | ||||||     
T  15137671 tttgaagaaactaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccacc 15137572  T
Q  243 aggccaacccaagtgggtta 262  Q
    ||||||||||||||||||||    
T  15137571 aggccaacccaagtgggtta 15137552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 20335790 - 20335907
Alignment:
Q  144 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 243  Q
    ||||||||| ||| |||||||| | |||||||||||   || ||||||||||||||||| ||||| || ||||||||||| |||| ||  |||||| |||    
T  20335790 ttgaagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctcta 20335889  T
Q  244 ggccaacccaagtgggtt 261  Q
    | ||||||||||||||||    
T  20335890 gaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 24513911 - 24513795
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||| ||| |||||||||| |||||||||||   || |||||||||||||||||  ||||  |  ||||||||||||| | ||  |||||||||||||    
T  24513911 aagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggc 24513812  T
Q  247 caacccaagtgggttat 263  Q
    |||||||||||||||||    
T  24513811 caacccaagtgggttat 24513795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 30579453 - 30579335
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||||||||| || |  ||| ||||||||||||||||| ||||| |   |||||||||  || | ||  ||||||||     
T  30579453 tttgaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccacc 30579354  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  30579353 aggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 26459411 - 26459487
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||||||||||||||||||||||    
T  26459411 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 26459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 41487477 - 41487362
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||||||||| || |    | ||||||||||||||||| ||||| ||  |||||||||| |||| ||  ||||||||     
T  41487477 tttgaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgagga-ga--acactcccaagtcccaagccaataccacc 41487381  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  41487380 aggccaacccaagtgggtt 41487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 43591025 - 43590906
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||| ||||| ||     || ||||||||||||||| | ||||| || ||||||||||| |||| ||  ||||||||     
T  43591025 tttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccacc 43590926  T
Q  243 aggccaacccaagtgggtta 262  Q
    |||||||||||| |||||||    
T  43590925 aggccaacccaactgggtta 43590906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 48772052 - 48771937
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||||||||||||||||  |     ||||||||||||||||||||  |||| || |||||||||| ||||| ||  |||||||| | ||    
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagc 48771953  T
Q  247 caacccaagtgggtta 262  Q
    ||||||||||||||||    
T  48771952 caacccaagtgggtta 48771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 2446426 - 2446308
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||||||| | || |  ||| |||||||| ||||| || ||||| || ||||||||||| |||| ||  |||||||      
T  2446426 tttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatc 2446327  T
Q  243 aggccaacccaagtgggtt 261  Q
    || ||||||||||||||||    
T  2446326 agaccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 25590729 - 25590611
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| ||||||||| ||||||| ||||| || |||||||||| ||| | ||  |||||||      
T  25590729 tttgaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaac 25590630  T
Q  243 aggccaacccaagtgggtt 261  Q
    ||| |||||||||||||||    
T  25590629 aggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 18363771 - 18363694
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    |||| |||||||||||| ||||| || |||||||||||||| | ||   |||||||||||||||||||||||||||||    
T  18363771 aatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggttat 18363694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 22760938 - 22760862
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||| |||||||| || |||||||||||||||||    
T  22760938 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtta 22760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 41519072 - 41519188
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||||||||| ||||||||| |  ||||||||||| ||||||||| ||| | || |||||||  ||||||| ||  | || ||||||||    
T  41519072 aagaagctaaattagcccacccaaattgacaccggagataatcgaatctgagaccttgagaaggagcacactcttaaatcccaagccagtatcactaggc 41519171  T
Q  247 caacccaagtgggttat 263  Q
    ||||| |||||| ||||    
T  41519172 caaccaaagtggattat 41519188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 9183149 - 9183228
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 222  Q
    ||||||||| |||| |||||||||| ||||||||| |  ||||||||||||||||||| | ||||| || ||||||||||    
T  9183149 tttgaagaaactaaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactccca 9183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 15905632 - 15905746
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||| |||||| ||||||||||    || |||||||||||||||||| |||| || ||||||||||  |||| ||  |||||| |     
T  15905632 tttgaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgcc 15905730  T
Q  243 aggccaacccaagtgg 258  Q
    ||||||||||||||||    
T  15905731 aggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 23552193 - 23552118
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||| |||||||| ||||| || ||||||||||  |||| ||| |||| |||||||||||||||||||||||    
T  23552193 aatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 30442604 - 30442487
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| ||||||| ||| |||||| |||||||| ||| ||| |||||||||| |||||| ||||| || || |||||||  |||| ||  |||||||||    
T  30442604 tttgaataagctaaattaacccacccaaattgac-tcc-agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccact 30442507  T
Q  243 aggccaacccaagtgggtta 262  Q
     |||||||||||||||||||    
T  30442506 gggccaacccaagtgggtta 30442487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 42712069 - 42711962
Alignment:
Q  150 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 249  Q
    ||||||| ||||||||||||||||||||     || |||||||| |||||||| ||||| || ||||||||||  | || || ||||||||||| |||||    
T  42712069 aagctaaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaa 42711970  T
Q  250 cccaagtg 257  Q
    ||||||||    
T  42711969 cccaagtg 42711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 42836008 - 42836079
Alignment:
Q  192 acctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    ||||||| ||| |||||||| ||||||||||  |||| ||  ||||||||||||||||||||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 42836079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 17040970 - 17041088
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||  |||||| |||||| ||    ||| ||||||||||||||||| ||||| || |||||| ||| ||||| ||  ||| |||||    
T  17040970 tttgaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccact 17041069  T
Q  243 aggccaacccaagtgggtt 261  Q
    || ||||||||||||||||    
T  17041070 agaccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 35513580 - 35513467
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||| |||||||||||  ||||  ||| |||||||| |||||  | ||||| || ||||||| ||| |||| ||  |||||||||||||    
T  35513580 aagaagctaaattagtccacctaaattaccatcggagaaaatcgaacatgagatatcgaggaggagcacactctcaagtcccaagcaaataccactaggc 35513481  T
Q  247 caacccaagtgggt 260  Q
    |||||||| |||||    
T  35513480 caacccaaatgggt 35513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 39631919 - 39631842
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    ||||||||||||||||| ||||| || |  |||||||  |||| ||  ||||||||||||||||||||||||||||||    
T  39631919 aatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggttat 39631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 7801283 - 7801179
Alignment:
Q  158 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 257  Q
    ||||||||| ||||||||||||  ||    ||||||||||||||| || || || ||||||||||  |||| ||| |||||||| ||||||| |||||||    
T  7801283 ttagcccacttaaattgacatcggaggggttcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtg 7801184  T
Q  258 ggtta 262  Q
    |||||    
T  7801183 ggtta 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 22927524 - 22927477
Alignment:
Q  213 cacactcccaaatccctagttaataccactaggccaacccaagtgggt 260  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||    
T  22927524 cacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 23301603 - 23301678
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||| ||| ||||||||  |||| || ||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  23301603 aatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 43215259 - 43215184
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || |||||||| |  |||| ||  ||||||||||| ||||||||||||||||    
T  43215259 aatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 43663053 - 43663168
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||| ||||| ||||||| | |  ||| | |||||||||||| || ||||| |||||| |||| |  |||| ||| |||||||      
T  43663053 tttgaagaagctaaattagtccacccaaattgataccggagagattcgaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatc 43663152  T
Q  243 aggccaacccaagtgg 258  Q
    ||||||||||||||||    
T  43663153 aggccaacccaagtgg 43663168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 7309473 - 7309396
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccc 221  Q
    |||||||||||||| ||||||||| |||||||||| |  ||| |||||||| |||||||| ||||| || |||||||||    
T  7309473 tttgaagaagctaaattagcccacttaaattgaca-cggagagaatcgaacttgagacctcgaggaggagcacactccc 7309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 2883067 - 2882991
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 220  Q
    |||||||||||||||| ||||||||||||||| || |  ||| ||| ||||||||||||| ||||| || ||||||||    
T  2883067 tttgaagaagctaagt-agcccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 21558246 - 21558181
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 208  Q
    |||||||||||||| ||| ||||||||||||| || |  ||| ||||||||||||||||| |||||    
T  21558246 tttgaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgagga 21558181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 27313692 - 27313772
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaa 223  Q
    |||||||||||||| ||||| ||||||||||| ||||  ||| ||||||| |||| |||| ||||| || || ||||||||    
T  27313692 tttgaagaagctaaattagctcacctaaattggcatcagagagaatcgaatctgaaaccttgaggaggagcaaactcccaa 27313772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 37085550 - 37085618
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 254  Q
    |||||||||||| |||| ||||| || |||||||||||||||| ||  |||||||| | ||||||||||    
T  37085550 aatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccatgccaacccaa 37085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 25021345 - 25021412
Alignment:
Q  195 tgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    |||||| | ||||| || ||||||||||  |||| ||  |||||||||||||||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 25021412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 25655229 - 25655304
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||| |||| ||||| || ||||||| || ||||| ||| ||||||||||  |||||||| |||||||    
T  25655229 aatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtt 25655304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 35119458 - 35119383
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||| | || ||||| || || || |||| ||||| ||| ||||||||||||||||||||| ||||||    
T  35119458 aatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggtt 35119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 37473732 - 37473673
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 202  Q
    |||||||||||||| ||| |||||||||||||||||    || |||||||||||||||||    
T  37473732 tttgaagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacct 37473673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 4572256 - 4572314
Alignment:
Q  144 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 202  Q
    ||||||||| ||| |||||||||| ||||||||| |  ||| |||||||||||||||||    
T  4572256 ttgaagaagataaattagcccacccaaattgacaccggagagaatcgaacctgagacct 4572314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 21854616 - 21854550
Alignment:
Q  193 cctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtggg 259  Q
    |||||||| | ||||| || |||||||||| ||||||||  |||||||  |||||||||||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 29385701 - 29385817
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||| ||  ||||||||| |||||| || |  ||| |||| |||||||||||| ||||| || |||||||| || |||| ||  || ||||      
T  29385701 tttgaagaagcaaaagtagcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatc 29385800  T
Q  243 aggccaacccaagtggg 259  Q
     ||||||||||||||||    
T  29385801 cggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 44628146 - 44628257
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||||||||| ||||||||| || ||  |||| ||| |||||| | ||||| || |||||||| |  |||| || ||| | ||| ||||    
T  44628146 aagaagctaaattagcccaccaaaattgaca-ccgagggaatcaaacttgagactttgaggaggagcacactccaaggtcccaagctaacaacaccaggc 44628244  T
Q  247 caacccaagtggg 259  Q
    |||||||||||||    
T  44628245 caacccaagtggg 44628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 45559227 - 45559199
Alignment:
Q  234 aataccactaggccaacccaagtgggtta 262  Q
    |||||||||||||||||||||||||||||    
T  45559227 aataccactaggccaacccaagtgggtta 45559199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 15281 - 15399
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  ||||||||     
T  15281 tttgaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacc 15380  T
Q  243 aggccaacccaagtgggtt 261  Q
    || ||||||||||||||||    
T  15381 agaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 8e-25; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 16773925 - 16773807
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||||||||| ||||  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||| ||||||||     
T  16773925 tttgaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccacc 16773826  T
Q  243 aggccaacccaagtgggtt 261  Q
    || ||||| ||||||||||    
T  16773825 agaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 29075899 - 29075780
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||| |||||||| || |  ||| |||||||| ||||| || ||||| || |||||||||| ||||| ||  |||||||||    
T  29075899 tttgaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccact 29075800  T
Q  243 aggccaacccaagtgggtta 262  Q
    |||| |||||||||||||||    
T  29075799 aggcaaacccaagtgggtta 29075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 6844847 - 6844728
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  ||  |||||||||||| ||    |||||||||||||| |||||| ||||| || ||||||||||||| || ||| ||||||||     
T  6844847 tttgaagaagctaaactaatccacctaaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacc 6844748  T
Q  243 aggccaacccaagtgggtta 262  Q
     |||||||||||||||||||    
T  6844747 tggccaacccaagtgggtta 6844728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 22737200 - 22737082
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||| |||||||||||||| |||  ||  ||||||||||||||| | | ||| || |||||| |||| |||| ||  |||||||||    
T  22737200 tttgaagaagctaaattaacccacctaaattgatatcagagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccact 22737101  T
Q  243 aggccaacccaagtgggtt 261  Q
    || ||||||||||||||||    
T  22737100 agaccaacccaagtgggtt 22737082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 263
Target Start/End: Original strand, 17028225 - 17028342
Alignment:
Q  146 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 245  Q
    ||||||||||| ||||||||||||||||||||    ||  |||| |||||||||||| ||||| || ||||||||||| |||| |   ||||| ||||||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactagg 17028324  T
Q  246 ccaacccaagtgggttat 263  Q
     |||||||||||||||||    
T  17028325 tcaacccaagtgggttat 17028342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 25627149 - 25627056
Alignment:
Q  169 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||||| |  ||| ||||||||||||||||| ||||| || ||||||||||| | || ||  |||||||||||||||||||||||||||||    
T  25627149 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtta 25627056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 3252247 - 3252371
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||| |||| |||||||| |  ||||| ||||  ||| |||||||||||||| |  ||||||||   ||||||||| || | ||| |||||||||    
T  3252247 tttgaagaaactaaattagcccatccgaattggcatcagagagaatcgaacctgagagcctgaggaagagtgcactcccaagtctcaagtcaataccact 3252346  T
Q  243 aggccaacccaagtgggttatgaaa 267  Q
    |||||||||||||||||||| ||||    
T  3252347 aggccaacccaagtgggttaagaaa 3252371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 14495766 - 14495882
Alignment:
Q  146 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 245  Q
    |||||||||||  ||||||| |||||||| ||||  ||| |||| || ||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||     
T  14495766 gaagaagctaaactagcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 14495865  T
Q  246 ccaacccaagtgggtta 262  Q
    ||||||||| |||||||    
T  14495866 ccaacccaaatgggtta 14495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 8278233 - 8278352
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||||||| | || |  |||||||| ||| ||||| || ||||| || ||||||||||| |||| ||  |||||||      
T  8278233 tttgaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatc 8278332  T
Q  243 aggccaacccaagtgggtta 262  Q
    || |||||||||||||||||    
T  8278333 agaccaacccaagtgggtta 8278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 22020820 - 22020938
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||| |||| |||||||||||||||| |||    ||| ||||||| ||||||| |  |||| || |||||||||| ||||| || ||||||||||    
T  22020820 tttgaagaaactaaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccact 22020919  T
Q  243 aggccaacccaagtgggtt 261  Q
    | ||||||||||| |||||    
T  22020920 atgccaacccaagagggtt 22020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 29173604 - 29173531
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 220  Q
    |||||||||| |||||||||||||||||||| |  |||||||||||||||| |||| ||||| || ||||||||    
T  29173604 aagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 21589406 - 21589288
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  |||||||||||||||| || |  ||  ||||||||||||||| | |||||  | || |||||||  |||| ||  ||||||||     
T  21589406 tttgaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccacc 21589307  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  21589306 aggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 87424 - 87499
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||| |||||||||||| ||||| || |||||||||| || || ||  |||||||||||||||||| |||||||||    
T  87424 aatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtt 87499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 1410619 - 1410728
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||| |||  |||||||| |  ||| ||||||| ||||||||| ||||| || |||||||||| ||||| ||| ||||||||     
T  1410619 tttgaagaagctaaattagcctacc-caattgacaccacagagaatcgaa-ctgagacctcgaggaggagcacactcccatatcccaagtcaataccacc 1410716  T
Q  243 aggccaacccaa 254  Q
    || |||||||||    
T  1410717 agaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 43241655 - 43241754
Alignment:
Q  158 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 257  Q
    |||| ||| |||||||| ||||  ||| ||| |||||||||||||  ||||||  |||||||| | ||||| ||| ||||||||||| ||||||||||||    
T  43241655 ttagtccagctaaattggcatcgaagagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtg 43241754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 43442314 - 43442235
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 222  Q
    ||||||||| |||| |||||||| | ||||||||| |  ||| ||||||||||||||||| ||||| || ||||||||||    
T  43442314 tttgaagaaactaaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactccca 43442235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 24907607 - 24907542
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 208  Q
    |||||| ||||||| ||||||||||||||||| ||||   ||||||||||||||||| || |||||    
T  24907607 tttgaataagctaaattagcccacctaaattggcatcaaggataatcgaacctgagaacttgagga 24907542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 18437160 - 18437088
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 258  Q
    ||||||||| || || | ||||| || ||||||| ||| |||| |||||||||||||||||||||| ||||||    
T  18437160 aatcgaacccgaaactttgaggaggagcacactctcaagtcccaagttaataccactaggccaacctaagtgg 18437088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 262
Target Start/End: Complemental strand, 19043529 - 19043457
Alignment:
Q  190 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||||||| | ||| | || ||||||||||| | || ||| |||| ||||||||||||||||||||||||    
T  19043529 gaacctgagactttgagaaggaacacactcccaagttccaagtcaatagcactaggccaacccaagtgggtta 19043457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 14285236 - 14285161
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || ||||||||||  | || ||  ||| ||||| ||||||||||||||||||    
T  14285236 aatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 16436692 - 16436622
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 257  Q
    |||||||| |||||||| ||||| || |||||||| || |||| ||  ||||||||||||||||||||||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacactcc-aagtcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 18169793 - 18169905
Alignment:
Q  144 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 243  Q
    ||||||||||||| ||||||||||||| ||| || |  ||| |||||||||| |||||  || || ||||||||||||| ||||| ||| ||||||   |    
T  18169793 ttgaagaagctaaattagcccacctaatttggca-ctgagagaatcgaacct-agaccacgaagaggaccacactcccagatcccaagtcaatacc---a 18169887  T
Q  244 ggccaacccaagtgggtt 261  Q
    ||||||| ||||||||||    
T  18169888 ggccaactcaagtgggtt 18169905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 21549138 - 21549213
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||| |||||| |  |||| || ||||||||||  |||| ||  ||||||||||||||||||||||||||||    
T  21549138 aatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 26078052 - 26078127
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| || ||  | || |||||||| |||| |   ||||||||||||||||||||||||||||    
T  26078052 aatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 30883203 - 30883274
Alignment:
Q  190 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||| |||||||| ||||| || ||||||||||  |||| ||  ||||||||||| ||||||||||||||||    
T  30883203 gaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 34984881 - 34984806
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||| |||||| ||||| || ||||||||||  | || ||  ||||||||||| ||||||||||||||||    
T  34984881 aatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 35705103 - 35705045
Alignment:
Q  144 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 202  Q
    ||||||||||||| |||||||||| ||||||||| |   || |||||||||||||||||    
T  35705103 ttgaagaagctaaattagcccacccaaattgacaccggggagaatcgaacctgagacct 35705045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 263
Target Start/End: Original strand, 7918518 - 7918547
Alignment:
Q  234 aataccactaggccaacccaagtgggttat 263  Q
    ||||||||||||||||||||||||||||||    
T  7918518 aataccactaggccaacccaagtgggttat 7918547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 5390853 - 5390926
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || |||  ||||||  ||| ||  ||||||||||||||||||||| ||||||    
T  5390853 aatcgaacctgagacctcgaggaggagcac--tcccaagccccaagccaataccactaggccaacccaaatgggtt 5390926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 10054165 - 10054109
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgaga 199  Q
    |||||||||||||| |||||||||| || |||| |||  ||| ||||||||||||||    
T  10054165 tttgaagaagctaaattagcccacccaagttgatatcggagagaatcgaacctgaga 10054109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 14804671 - 14804743
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 258  Q
    |||||||||| |||| ||||| | || ||||||| |||||||| |   |||| ||||||||||||||||||||    
T  14804671 aatcgaacctaagacttagagaaggaacacactcacaaatcccaaaccaataacactaggccaacccaagtgg 14804743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 968476 - 968362
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| ||||||||||||||||| ||||  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||| ||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggc 968377  T
Q  247 caacccaagtgggtt 261  Q
    |||| ||||||||||    
T  968376 caactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 23361617 - 23361726
Alignment:
Q  153 ctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaaccc 252  Q
    |||| |||||||||||||||||||| |  ||| ||| ||||||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||| ||||||    
T  23361617 ctaaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaaccc 23361716  T
Q  253 aagtgggtta 262  Q
    ||||||||||    
T  23361717 aagtgggtta 23361726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 16852458 - 16852340
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  |||||||||||||||| ||     || ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||    
T  16852458 tttgaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccact 16852359  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  16852358 aggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 44780072 - 44780190
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| |||||||||    ||  |||| |||||||||||| ||||| || ||||||||||| |||| ||  ||| |||||    
T  44780072 tttgaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccact 44780171  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  44780172 aggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 3624697 - 3624577
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| ||||||| |||||||||||||||||||  |  ||| ||||||||||||||||| || || || ||||||||||  |||| ||  |||||||||    
T  3624697 tttgaaaaagctaaattagcccacctaaattgacc-cggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccact 3624599  T
Q  243 aggccaacccaagtgggttatg 264  Q
    ||||||||||||||||| ||||    
T  3624598 aggccaacccaagtgggctatg 3624577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 11819894 - 11819775
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| |||||||||    ||  ||||||||||||||||| ||||| || ||||||||||| |||| ||   ||||||||    
T  11819894 tttgaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 11819795  T
Q  243 aggccaacccaagtgggtta 262  Q
    ||| |||||||| |||||||    
T  11819794 agggcaacccaaatgggtta 11819775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 2203610 - 2203494
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| ||||||| |||||||||| |||||| || |   || ||| || |||||||||| ||||| || ||||||||||  |||| ||  |||||||||    
T  2203610 tttgaataagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 2203511  T
Q  243 aggccaacccaagtggg 259  Q
    |||||||||||||||||    
T  2203510 aggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 19703488 - 19703563
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || ||||||| ||  |||| ||  ||||||||||||||||||||||||||||    
T  19703488 aatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 20994419 - 20994534
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaag-accacactcccaaatccctagttaataccactagg 245  Q
    |||||||||| |||||||| | ||||||  | |  |||||||||| |||||||| | |||| || | ||||||||||  |||| ||| ||||||||||||    
T  20994419 aagaagctaaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaataccactagg 20994518  T
Q  246 ccaacccaagtgggtt 261  Q
    ||||||||||||||||    
T  20994519 ccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 8059750 - 8059632
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  |||| |||  |||||||||||   || ||| ||||||||||||| ||||| || ||||||| || || || ||| |||||||      
T  8059750 tttgaagaagctaaactagctcactcaaattgacatcagggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatc 8059651  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  8059650 aggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 8485117 - 8484999
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||||||||| || |  ||| |||||||  ||||||||  | || || ||||||| ||  |||| ||  ||||||||     
T  8485117 tttgaagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccacc 8485018  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  8485017 aggccaacccaagtgggtt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 18540416 - 18540298
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||| ||| |  |||||| || |  ||| ||||||||||||||||| |||||  |  |||||||||  |||| ||  |||||||||    
T  18540416 tttgaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccact 18540317  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  18540316 aggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 28783178 - 28783060
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| |||||| || |   || |||||||| |||||||| ||||| || ||||||||||  || | ||  ||||||||     
T  28783178 tttgaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccacc 28783079  T
Q  243 aggccaacccaagtgggtt 261  Q
    | |||||||||||||||||    
T  28783078 aagccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 29431129 - 29431011
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||  |||||  || |  ||| ||||||||||||| |||  |||| || ||||||||||| |||| ||  |||||| |     
T  29431129 tttgaagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgcc 29431030  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  29431029 aggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 29858007 - 29858124
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| ||||||| ||||||||||||||||| || |   |  ||||||||||||||||| ||||| || |||||||||   |||| ||  ||||||||     
T  29858007 tttgaaaaagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccacc 29858106  T
Q  243 aggccaacccaagtgggt 260  Q
    ||||||| ||||||||||    
T  29858107 aggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 4830605 - 4830487
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||  ||| | ||||||||| | || | | | ||||||||||||| ||||| || ||||||| || ||||| |   ||||||||     
T  4830605 tttgaagaagctaaattaatccatccaaattgacaccgtataaatttgaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccacc 4830506  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  4830505 aggccaacccaagtgggtt 4830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 27750805 - 27750728
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    ||||||||||||||||| ||||| || ||||||||||| |||| ||   ||||||| ||| |||||||| ||||||||    
T  27750805 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggttat 27750728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 6569755 - 6569847
Alignment:
Q  169 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||| |  ||| |||||||| ||| ||||| |||| || |||||||||| ||||| ||  |||| ||||||||||||| |||||||||    
T  6569755 aaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 35690037 - 35690129
Alignment:
Q  158 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaac 250  Q
    |||||| || |||||||||| |  ||| ||||||||||||||||| ||||| || || || |||| ||||| ||  |||||||||||||||||    
T  35690037 ttagcctacttaaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 3826778 - 3826853
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||||| || | ||| || ||||||| |||||  | ||  ||||||||||||||||||||||||||||    
T  3826778 aatcgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggtt 3826853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 11518835 - 11518954
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| || |||| |||||||||  ||||||||||  |||  |||||||||| |||||| ||||| |   |||||||||| | || ||   ||||||||    
T  11518835 tttgaataaactaaattagcccactcaaattgacattatagtgaatcgaacctaagaccttgaggaggggtacactcccaagttccaagcctataccact 11518934  T
Q  243 aggccaacccaagtgggtta 262  Q
    |||| |||||||||||||||    
T  11518935 aggctaacccaagtgggtta 11518954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 30483889 - 30483960
Alignment:
Q  190 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||   ||||| || |||||||||| ||||| ||  ||||||||| ||||||||||||||||||    
T  30483889 gaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 35641902 - 35641977
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||| | ||||| || |||||||||||||| | ||   ||||||| || ||||||||||||||||    
T  35641902 aatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggtt 35641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 6536635 - 6536561
Alignment:
Q  146 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 220  Q
    ||||||||||| ||| ||||||||||||| || |  ||| ||| ||||||||||||| ||||| || ||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcc 6536561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 7347955 - 7347921
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgaca 177  Q
    |||||||||||||| ||||||||||||||||||||    
T  7347955 tttgaagaagctaaattagcccacctaaattgaca 7347921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 23874386 - 23874460
Alignment:
Q  189 cgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    |||||||||||||| ||||| |  || | |||||  |||| ||  ||||||||||||||||||||||||||||||    
T  23874386 cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggttat 23874460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 42740587 - 42740501
Alignment:
Q  168 taaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 254  Q
    |||||||||| |  ||| ||| ||||||||||||| ||||| || || ||||||||||  | || |||||||||||| |||||||||    
T  42740587 taaattgacaccagagagaattgaacctgagaccttgaggatgatcaaactcccaaatttcaagctaataccactagaccaacccaa 42740501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 3058009 - 3058125
Alignment:
Q  144 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 243  Q
    ||||||||||||| | |||||||||||||||||  |  ||| ||||||||||||||||| |  || || |||||||||||  ||| |   |||||||| |    
T  3058009 ttgaagaagctaaat-agcccacctaaattgacgccgaagagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccacca 3058107  T
Q  244 ggccaacccaagtgggtt 261  Q
    | ||||||||| ||||||    
T  3058108 gaccaacccaaatgggtt 3058125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 3305146 - 3305231
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 228  Q
    |||| ||||| ||| ||||||||||||||||| || |  |||||||||||  |||||||| ||||| || ||| |||||| |||||    
T  3305146 tttgcagaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatccc 3305231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 16843753 - 16843832
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaa 223  Q
    |||||||||||||| | |||||| ||||||||||| |  ||| |||||||||||||| || | ||| || |||||||||||    
T  16843753 tttgaagaagctaaat-agcccatctaaattgacaccggagagaatcgaacctgagatcttgcggaggagcacactcccaa 16843832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 33549218 - 33549104
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| ||||| ||||||||||| ||||| ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||| || |    
T  33549218 aagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagac 33549119  T
Q  247 caacccaagtgggtt 261  Q
    |||||||||||||||    
T  33549118 caacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 6758380 - 6758497
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| || ||||||||||||||||| |  ||| |||||| | |||||||| ||||  || |||||||||||||||  ||  ||||||||     
T  6758380 tttgaagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccacc 6758479  T
Q  243 aggccaacccaagtgggt 260  Q
    |||||||| |||||||||    
T  6758480 aggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 12633124 - 12633008
Alignment:
Q  146 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 245  Q
    ||||||||||| |||| |||| |||||||||||   ||| |||||||| ||||| || || || || |||||||||||||||| ||| |||| |||  ||    
T  12633124 gaagaagctaaattagtccacttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccggg 12633025  T
Q  246 ccaacccaagtgggtta 262  Q
     ||||||||||||||||    
T  12633024 acaacccaagtgggtta 12633008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 12234469 - 12234583
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| ||| |||| |||||||||||    ||| ||||||||||||||||| |||   || ||||||||||  |||| ||| |||||||| ||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggc 12234568  T
Q  247 caacccaagtgggtt 261  Q
    ||||| |||||||||    
T  12234569 caacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 21418588 - 21418470
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||||||||||| ||||| ||     || |||||||| |||||| | ||||| || ||||||||||| |||| ||  ||||||||     
T  21418588 tttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccacc 21418489  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||| ||||||    
T  21418488 aggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 31622949 - 31623067
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| ||||||||| |  ||  | || |||||||||||| ||||| || ||||||||||  |||| ||  ||||||||     
T  31622949 tttgaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacc 31623048  T
Q  243 aggccaacccaagtgggtt 261  Q
     | ||||||||||||||||    
T  31623049 ggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 1056643 - 1056762
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||| ||||||||| ||| || |  ||| |||||||| | | |||| ||||| || || |||||||| ||||  |  |||||||||    
T  1056643 tttgaagaagctaaattaacccacctaacttggcaccagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccact 1056742  T
Q  243 aggccaacccaagtgggtta 262  Q
    ||| ||||||||||||||||    
T  1056743 aggtcaacccaagtgggtta 1056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 12188304 - 12188379
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||| ||| |||| ||||| || ||||||||||  |||| ||  ||||||||||||||||||||||||||||    
T  12188304 aatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 14558080 - 14557962
Alignment:
Q  142 gtttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccac 241  Q
    ||||||||||||||| |||| ||||| ||||||||| ||  || ||||||||||||||||  ||||| || |||||| |||  |||| ||  || |||||    
T  14558080 gtttgaagaagctaaattagaccacccaaattgaca-ccgggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccac 14557982  T
Q  242 taggccaacccaagtgggtt 261  Q
     || ||||||||||||||||    
T  14557981 cagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 30127518 - 30127399
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||| |||||||| ||| || |||||||||| || |  | | ||||||||||||||||| || || || |||||||||| | ||| ||  ||||||||     
T  30127518 tttgaggaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccacc 30127419  T
Q  243 aggccaacccaagtgggtta 262  Q
    || |||||||||||||||||    
T  30127418 agaccaacccaagtgggtta 30127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 11423641 - 11423565
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||||||||||||| |||||  | || ||||||||||||| ||| |||||||| || ||| |||||| ||||||    
T  11423641 aatcgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagcccaagcgggtta 11423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 3715566 - 3715451
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| | ||||||||||||||||||    ||| |||||||| |||||||| || ||  | || ||||||| ||| | ||| ||||||||||| |    
T  3715566 aagaagctaaatcagcccacctaaattgacactggagagaatcgaacttgagacctcgacgagaagcatactcccagatctcaagtcaataccactagcc 3715467  T
Q  247 caacccaagtgggtta 262  Q
    ||||| || |||||||    
T  3715466 caaccaaaatgggtta 3715451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 28364055 - 28363948
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||  ||| |||||||| | ||||||||| |  ||||||||||| ||||||||| ||||| || ||||||| || ||||| |   |||||||||    
T  28364055 tttgaagaaattaaattagcccatccaaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccact 28363956  T
Q  243 aggccaac 250  Q
    | ||||||    
T  28363955 atgccaac 28363948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 32613100 - 32613214
Alignment:
Q  145 tgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactag 244  Q
    ||||||||||||  ||| |||  ||||||||||    ||| |||||||| ||||| || ||| | || |||||||||| | ||| ||| |||||||| ||    
T  32613100 tgaagaagctaaactagtccatttaaattgacactgaagagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccag 32613199  T
Q  245 gccaacccaagtggg 259  Q
    |||||||||||||||    
T  32613200 gccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 12216847 - 12216803
Alignment:
Q  158 ttagcccacctaaattgacatcctagataatcgaacctgagacct 202  Q
    ||||||||||||||||||||  | ||| |||||||||||||||||    
T  12216847 ttagcccacctaaattgacagtcaagagaatcgaacctgagacct 12216803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 7949412 - 7949530
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| ||||| || |||||||| |  |||| ||  |||||| ||    
T  7949412 tttgaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgct 7949511  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||| ||||||||||||    
T  7949512 aggccagcccaagtgggtt 7949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 143 - 263
Target Start/End: Complemental strand, 28635814 - 28635694
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| |||||| || |  ||| |||||||||| ||||||  |||| || |||||||||| ||||| ||| | ||||||     
T  28635814 tttgaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccacc 28635715  T
Q  243 aggccaacccaagtgggttat 263  Q
    ||| |||||||||||||||||    
T  28635714 aggacaacccaagtgggttat 28635694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 49576852 - 49576963
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||| |||||||| ||||| ||||||||||   ||| ||||||||||||||||| ||||| || ||||||||||| |||  ||  ||||||||     
T  49576852 tttgaagaagttaagttagtccacccaaattgacattggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccacc 49576951  T
Q  243 aggccaacccaa 254  Q
    ||||||||||||    
T  49576952 aggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 21660106 - 21660220
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||| | |||||||||||||    |||||||||||| |||||||| |||||||| |||||||||| ||| | ||| |||||||| || |    
T  21660106 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21660205  T
Q  247 caacccaagtgggtt 261  Q
    |||||||||| ||||    
T  21660206 caacccaagttggtt 21660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 21668870 - 21668984
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||| | |||||||||||||    |||||||||||| |||||||| |||||||| |||||||||| ||| | ||| |||||||| || |    
T  21668870 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21668969  T
Q  247 caacccaagtgggtt 261  Q
    |||||||||| ||||    
T  21668970 caacccaagttggtt 21668984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 37109352 - 37109428
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||||||||||||||||||||||    
T  37109352 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 37109428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 19680789 - 19680864
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||| |||||| |||||||| ||||||||||| |||| ||  |||||||||||||||| |||||||||||    
T  19680789 aatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 8030162 - 8030280
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| |||||||||    ||  |||||||| |||||||| ||||| || ||||||||||| |||| ||   ||||||||    
T  8030162 tttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccact 8030261  T
Q  243 aggccaacccaagtgggtt 261  Q
    ||| ||| |||||||||||    
T  8030262 agggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 51954232 - 51954134
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccac 241  Q
    |||||||||||||| |||||||||| ||||||||| |  |||||||| |||||||||||| ||||| || || |||||||| |||| ||| ||| ||||    
T  51954232 tttgaagaagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaagtcaatgccac 51954134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 19238578 - 19238654
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||||| ||||||| ||||| || ||||||||||| |||| ||  |||||||| ||||||||||||||||||||    
T  19238578 aatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtta 19238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 31826723 - 31826607
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||| ||| |||||||||| |||||||||    ||  |||||||| |||||||| ||||| || ||||||| |||||||| ||   |||||||||||     
T  31826723 aagaaggtaaattagcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactaggg 31826624  T
Q  247 caacccaagtgggttat 263  Q
    |||||||||||||||||    
T  31826623 caacccaagtgggttat 31826607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 37274417 - 37274537
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaa-taccac 241  Q
    |||||||||||||| ||||||||| ||||||  || |  ||| |||||||||| |||||| ||||| || ||||||||||  |||| ||  || ||| ||    
T  37274417 tttgaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgac 37274516  T
Q  242 taggccaacccaagtgggtta 262  Q
    |||||||||||||||||||||    
T  37274517 taggccaacccaagtgggtta 37274537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 263
Target Start/End: Complemental strand, 46545829 - 46545709
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| || |||| |||| ||| |||||||||||||  ||| ||||||| |||||| || ||||| || ||||||| ||  || | ||  |||||||||    
T  46545829 tttgaaaaaactaaattagtccatctaaattgacatcagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccact 46545730  T
Q  243 aggccaacccaagtgggttat 263  Q
    |||||||||||||||||||||    
T  46545729 aggccaacccaagtgggttat 46545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 37720171 - 37720290
Alignment:
Q  142 gtttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccac 241  Q
    ||||||||||||||| ||||||||||||||||||   |   || ||||||||||| ||||| ||||| |  ||||||||||  |||| ||  |||| |||    
T  37720171 gtttgaagaagctaaattagcccacctaaattgatccctgggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacac 37720270  T
Q  242 taggccaacccaagtgggtt 261  Q
     |||||||||||||||||||    
T  37720271 caggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 18404845 - 18404959
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    ||||||||||  || ||||| |||||||||| | |||||||||||||||||||| | || || ||  | | ||||||||||| ||| ||||||||||  |    
T  18404845 aagaagctaaactaacccacttaaattgacaccttagataatcgaacctgagacattgatgaggagtatattcccaaatcccaagtcaataccactaaac 18404944  T
Q  247 caacccaagtgggtt 261  Q
    |||||||| ||||||    
T  18404945 caacccaaatgggtt 18404959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 51250484 - 51250598
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||||||||| |||||| || |  ||  |||||||| ||||| || ||||  || |||||||||| ||||| ||  |||||||| ||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggc 51250583  T
Q  247 caacccaagtgggtt 261  Q
    |||||||||||||||    
T  51250584 caacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 47044792 - 47044715
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    ||||||||||||||||| ||||| || || |||| || ||||| ||| |||||||| ||||||| |||||||||||||    
T  47044792 aatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggttat 47044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 262
Target Start/End: Original strand, 9936926 - 9937038
Alignment:
Q  150 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 249  Q
    ||||||| ||| |||||| ||||||||| |   || |||||||||||| || | ||||| || ||||||||||| || | |||  |||||||||||||||    
T  9936926 aagctaaattaacccacccaaattgacaacggtgagaatcgaacctgaaacttcgaggaggagcacactcccaagtctcaagtcgataccactaggccaa 9937025  T
Q  250 cccaagtgggtta 262  Q
    ||||||| |||||    
T  9937026 cccaagtaggtta 9937038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 31759659 - 31759735
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||| ||||||||| ||||| || ||||||||||| |||| ||  |||||||||||  ||||||||||||||||    
T  31759659 aatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtta 31759735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 45061096 - 45060977
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||| |  |||||||  ||||||||||||  |||||||||||  ||||| || ||  | ||  ||||| ||||| ||| ||| |||||||||    
T  45061096 tttgaagaagctcaactagcccatttaaattgacatcgaagataatcgaatttgagatcttgaacaggagtacacttccaaaccccaagtcaataccact 45060997  T
Q  243 aggccaacccaagtgggtta 262  Q
    ||| ||||||||||||||||    
T  45060996 aggtcaacccaagtgggtta 45060977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 55427165 - 55427276
Alignment:
Q  150 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 249  Q
    ||||||| |||||||||| |||||| || |   || ||||||||||||||||| ||| | || || |||||||  |||| ||  |||||||| |||||||    
T  55427165 aagctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaa 55427264  T
Q  250 cccaagtgggtt 261  Q
    ||||||||||||    
T  55427265 cccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 2622396 - 2622475
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctag----ttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||| | ||||| || ||||||||||  |||| ||    ||||||||||||||||||||||||||||||    
T  2622396 aatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 13015538 - 13015444
Alignment:
Q  150 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactag 244  Q
    ||||||| ||| |||||||||||||||| |  ||| |||||||| |||||| | ||||| || ||||||||||| |||| ||  |||||||||||    
T  13015538 aagctaaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 37443813 - 37443701
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    ||||| |||| ||||||||| ||||||| || |  |||||||||||| ||| |||| |||||  ||   ||||||| ||||| ||  ||||||||||||     
T  37443813 aagaaactaaattagcccacataaattggcaccagagataatcgaacatgaaacctcgaggagtac---actcccagatcccaagccaataccactaggt 37443717  T
Q  247 caacccaagtgggtta 262  Q
    ||||||||||||||||    
T  37443716 caacccaagtgggtta 37443701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 27965538 - 27965586
Alignment:
Q  213 cacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||| ||||| ||  ||||||||||||||||||||||||||||    
T  27965538 cacactcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 38869843 - 38869783
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||  |||||||||||||    
T  38869843 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 4249252 - 4249177
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||| |||||||||||| ||||| || |||||||| ||||||| ||   ||||||||||||||| | |||||||||    
T  4249252 aatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 9241028 - 9241103
Alignment:
Q  188 tcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    |||||||| |||||| ||| | || |||||| ||| ||||| ||  |||||||| |||||||||||||||||||||    
T  9241028 tcgaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttat 9241103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 39509145 - 39509070
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||  | |||||  || ||||||||||||||||    
T  39509145 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 13901860 - 13901746
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||| |||||||||||| ||||   | | ||| |||| ||||||||  |||| || ||||||||||  || | ||  |||||||||    
T  13901860 tttgaagaagctaaattaacccacctaaattaacattagatagaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccact 13901761  T
Q  243 aggccaacccaagtg 257  Q
    || ||||||||||||    
T  13901760 agaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 24124052 - 24124098
Alignment:
Q  182 agataatcgaacctgagacctagaggaagaccacactcccaaatccc 228  Q
    |||||||||||||| ||||||  |||| |||||||||||||||||||    
T  24124052 agataatcgaacctcagacctcaaggaggaccacactcccaaatccc 24124098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 24234762 - 24234649
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| ||||||| |||||| |||||| ||||| ||  ||| |||||||| ||||||||  |||| || ||||||||||| |||| ||  ||||||||     
T  24234762 tttgaataagctaaattagcctacctaatttgac-tctgagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccacc 24234664  T
Q  243 aggccaacccaagtg 257  Q
     || |||||||||||    
T  24234663 tggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 47386750 - 47386808
Alignment:
Q  144 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 202  Q
    ||||||||||||| ||||||||||||||||||||    ||| ||| |||||||||||||    
T  47386750 ttgaagaagctaaattagcccacctaaattgacactagagagaattgaacctgagacct 47386808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 30584783 - 30584836
Alignment:
Q  146 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgaga 199  Q
    |||||| |||| ||||| || |||||||||||||  ||||||||||||||||||    
T  30584783 gaagaaactaaattagctcatctaaattgacatcggagataatcgaacctgaga 30584836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 30938177 - 30938278
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  || ||||||||||||| |||    || ||||||||||||||||| ||||| || |||||||| | ||||| |   |||||||||    
T  30938177 tttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccact 30938276  T
Q  243 ag 244  Q
    ||    
T  30938277 ag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 7292799 - 7292871
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 258  Q
    ||||||||||||||| | ||||| || ||||||||||  | || ||  ||||||||||| |||||||||||||    
T  7292799 aatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 42644907 - 42644963
Alignment:
Q  182 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaatac 238  Q
    ||||||||||||||||||| | |||||||| ||||||| || ||||| ||| |||||    
T  42644907 agataatcgaacctgagactttgaggaagaacacactctcagatcccaagtcaatac 42644963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 41591 - 41710
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||| ||||| |||||||||| |||||||||||  ||| ||| ||||||||||||| ||||| || || |||| || ||| | ||  |||||||||    
T  41591 tttgaagaggctaaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccact 41690  T
Q  243 aggccaacccaagtgggtta 262  Q
    ||||||||||||||||||||    
T  41691 aggccaacccaagtgggtta 41710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 29503388 - 29503271
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| || |||||| |||||||||| ||  || ||||||||||||||||| ||||| || ||||||||||  |||| |   |||||||||    
T  29503388 tttgaagaagctaaatttgcccacttaaattgaca-ccgggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccact 29503290  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  29503289 aggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 42327357 - 42327471
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||| ||||| |||||||||| |||||| || |  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||||||    
T  42327357 aagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggc 42327456  T
Q  247 caacccaagtgggtt 261  Q
    |||||||||||||||    
T  42327457 caacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 1435181 - 1435064
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| ||||||||| |  ||| |||||||| |||||||| |||||  | |||||||| ||||||| ||  | |||||||    
T  1435181 tttgaagaagctaaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccact 1435083  T
Q  243 aggccaacccaagtgggtt 261  Q
    | |||||||||||||||||    
T  1435082 atgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 42602672 - 42602554
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| |||||| || |  ||| |||| ||||| |||||| ||| | || ||||||||||  |||| ||  |||||||||    
T  42602672 tttgaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccact 42602573  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  42602572 aggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 11251205 - 11251087
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| ||| ||| ||||| |||||||||||||| |  ||| |||| |||||||||||| ||||| || |||||| |||| |||| ||  |||||||||    
T  11251205 tttgaataagttaaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccact 11251106  T
Q  243 aggccaacccaagtgggtt 261  Q
    | ||||||| |||||||||    
T  11251105 aagccaacctaagtgggtt 11251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 37480193 - 37480075
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||| ||||||  | |   || ||||||||||||||||| ||||| || ||||||| ||  |||| ||  ||||||||     
T  37480193 tttgaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccacc 37480094  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||||||||||    
T  37480093 aggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 4438980 - 4439057
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    |||||||| || ||||| ||||| || ||||||| || ||||| ||||||||||| ||||||||||||||||||||||    
T  4438980 aatcgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggttat 4439057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 14500352 - 14500277
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||| ||||||||||||||| || |||||||||| ||| | || | ||||||||||||||| |||||||||||    
T  14500352 aatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 28846805 - 28846690
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||| ||| |||| | ||| |||||||||||   |||||||||||||||||| | ||||| || ||||||||||  |||| ||| |||||||||||      
T  28846805 aagaagttaaattagtctacccaaattgacatcggtgataatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagat 28846706  T
Q  247 caacccaagtgggtta 262  Q
    ||||| ||||||||||    
T  28846705 caacctaagtgggtta 28846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 34041589 - 34041664
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||| |||||||||||| ||||| || ||||||| || ||||  ||| ||||||||||||||||||||||||||||    
T  34041589 aatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 39715067 - 39714992
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||| |||||||| | |||||||||||||||||    
T  39715067 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 3001493 - 3001383
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    ||||| |||| ||||||||| |||| || || |  |||||||||||||||||| ||  |||| || |||||||| | ||| | ||| |||||||||||||    
T  3001493 aagaacctaaattagcccacataaactggcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggc 3001394  T
Q  247 caacccaagtg 257  Q
    |||||||||||    
T  3001393 caacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 25637269 - 25637184
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 228  Q
    |||||||||| ||| ||||||||||||||||| ||||  ||| || |||||||||||||| ||| | || |||||||||| |||||    
T  25637269 tttgaagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccagatccc 25637184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 38854420 - 38854485
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 208  Q
    |||||||||||||| |||||||||||||||||||  |   |||||||||||||||||||| |||||    
T  38854420 tttgaagaagctaaattagcccacctaaattgaccccggtgataatcgaacctgagaccttgagga 38854485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 1729880 - 1729816
Alignment:
Q  197 agacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||| || ||||||||||| |||| ||  ||||||||||| ||||||||||||||||    
T  1729880 agacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 23052524 - 23052600
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    ||||||||||||||||| |||||  | ||||||||||| |||| ||  |||||||| ||||||||| ||||||||||    
T  23052524 aatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtta 23052600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 33582091 - 33582015
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 219  Q
    |||||||||||||| |||| ||||||||||||||||   ||| |||||||||||||||||  |||| || |||||||    
T  33582091 tttgaagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactc 33582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 40416391 - 40416467
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 262  Q
    |||||||||||||||||  |||| || || |||||||  | || ||| |||||||||||||||||||||||||||||    
T  40416391 aatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtta 40416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 7798994 - 7799111
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||| || ||||||| ||    ||| ||||||| |||||| || ||||| || ||||||||||| |||| ||  ||||||||     
T  7798994 tttgaagaagctaaattagcc-acttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccacc 7799092  T
Q  243 aggccaacccaagtgggtt 261  Q
    ||| |||||||||||||||    
T  7799093 aggacaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 16918579 - 16918653
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggt 260  Q
    |||| ||||| |||||| ||||| || |||||||||| ||||| |   |||||||||||||||||||||||||||    
T  16918579 aatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 21195638 - 21195752
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||||||| | |||||||||    ||  ||||||||||||||||| ||||| || ||||||||||| | || ||   |||||||||||     
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactaggg 21195737  T
Q  247 caacccaagtgggtt 261  Q
    |||||||| ||||||    
T  21195738 caacccaaatgggtt 21195752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 26545950 - 26545840
Alignment:
Q  151 agctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaac 250  Q
    |||||| ||| |||||||||||||| |||  ||| |||| ||| |||||||| ||| | || |||||| ||| ||||| || ||||||||| |  |||||    
T  26545950 agctaaattaacccacctaaattgatatcgaagagaatcaaacttgagacctcgagaaggagcacacttccagatcccaagctaataccaccaaaccaac 26545851  T
Q  251 ccaagtgggtt 261  Q
    |||||||||||    
T  26545850 ccaagtgggtt 26545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 29197334 - 29197452
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||| ||| ||| ||||||||||||||||| || |    | |||||||| |||||| |  |||| || ||||||||||| |||| ||| ||||||||     
T  29197334 tttgaaaaagttaaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccacc 29197433  T
Q  243 aggccaacccaagtgggtt 261  Q
    | |||||||||||||||||    
T  29197434 aagccaacccaagtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 11062435 - 11062358
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    |||| |||||||||||| |||||  | ||||||||||| | || ||  |||| |||||||||||||||||||||||||    
T  11062435 aatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggttat 11062358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 19244222 - 19244109
Alignment:
Q  148 agaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggcc 247  Q
    |||| |||| |||||||||  |||||| || |  ||| ||||||||||||||||| | ||| || ||||||| ||  |||| ||| ||||||| ||| ||    
T  19244222 agaaactaaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagacc 19244123  T
Q  248 aacccaagtgggtt 261  Q
    ||||||||||||||    
T  19244122 aacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 38856120 - 38856185
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 208  Q
    |||||||||||||| |||||||| | |||| |||| | ||||||||||||| |||||||| |||||    
T  38856120 tttgaagaagctaaattagcccatcgaaatggacaccgtagataatcgaacatgagaccttgagga 38856185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 5147680 - 5147764
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttatgaaatat 270  Q
    ||||||| | ||||||| ||| | || || ||||||| ||| | ||| ||||||||||| |||||||||||||||||| ||||||    
T  5147680 aatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggttattaaatat 5147764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 31573600 - 31573656
Alignment:
Q  144 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagac 200  Q
    ||||||||| ||| |||| |||||||||||||||||  ||| |||||||||||||||    
T  31573600 ttgaagaagttaaattagtccacctaaattgacatcgaagagaatcgaacctgagac 31573656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 35203341 - 35203417
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 219  Q
    |||||||||||||| ||| ||||| |||||||||| |  |||||||||||| |||||| | ||||| || |||||||    
T  35203341 tttgaagaagctaaattaacccacttaaattgacaccaaagataatcgaacatgagactttgaggatgagcacactc 35203417  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 42922490 - 42922414
Alignment:
Q  186 aatcgaacctgagaccta-gaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||||||||  ||||| || ||||||||||  | || ||  ||||||||||||||||||||||||||||    
T  42922490 aatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 11738041 - 11738120
Alignment:
Q  182 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 261  Q
    |||||||||||||||| || | ||||| || ||||||| || ||| ||||| ||||||||||  ||||| ||||||||||    
T  11738041 agataatcgaacctgaaactttgaggaggaacacactctcagatctctagtcaataccactaatccaactcaagtgggtt 11738120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 35916189 - 35916086
Alignment:
Q  158 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 257  Q
    ||||||||| ||||||||||||   ||  |||||| |||||| || ||||| || |||||||  ||||| | ||| |||||||| || ||||||||||||    
T  35916189 ttagcccacttaaattgacatcgaggaggatcgaatctgagatcttgaggaggaacacactcttaaatctcaagtcaataccaccagaccaacccaagtg 35916090  T
Q  258 ggtt 261  Q
    ||||    
T  35916089 ggtt 35916086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 13803587 - 13803493
Alignment:
Q  169 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    |||||| ||||  ||||||||||||||||||||| ||||| || |||||||| || || | ||  |||| ||||||  |||||||| ||||||||    
T  13803587 aaattggcatcagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaaatgggttat 13803493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 253
Target Start/End: Complemental strand, 21213887 - 21213777
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||| ||  |||||||||||||||| || |   || |||||||||||||||||  |||| || ||||||||||  |||| ||  ||||||||     
T  21213887 tttgaagaagcaaaactagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccacc 21213788  T
Q  243 aggccaaccca 253  Q
    || ||||||||    
T  21213787 agaccaaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 2311842 - 2311777
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 208  Q
    ||||||||||| || |||||||||  ||||||||| |  ||| ||||||||||||||||| |||||    
T  2311842 tttgaagaagccaaattagcccactcaaattgacaccgaagaaaatcgaacctgagacctcgagga 2311777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 9776403 - 9776313
Alignment:
Q  162 cccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 254  Q
    ||||||||||||  ||||  |||||||||||||||||| || || || || ||||   ||||||||| ||| |||||||||||| ||||||||    
T  9776403 cccacctaaattagcatcagagataatcgaacctgagatcttgaagatgagcacat--ccaaatcccaagtcaataccactaggtcaacccaa 9776313  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 12994377 - 12994454
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    |||||||| ||||||||  |||| || ||||||||||  |||| ||| ||||||||||| ||||| |||| |||||||    
T  12994377 aatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggttat 12994454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 32687556 - 32687479
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 263  Q
    ||||||||||||||||| ||||| || ||||||| ||| |||| |  ||||||||| ||  |||||||||||| ||||    
T  32687556 aatcgaacctgagacctcgaggaggaacacactctcaagtcccaaactaataccacaagaacaacccaagtggattat 32687479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 37755929 - 37756046
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||  |||||| ||||  ||  | |||||| |||||||| ||| | || |||| |||||  |||| ||  ||||||||     
T  37755929 tttgaagaagctaaattagcccactcaaattggcatcagagggagtcgaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccacc 37756028  T
Q  243 aggccaacccaagtgggt 260  Q
    | ||||||||||||||||    
T  37756029 aagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 37972013 - 37971956
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagac 200  Q
    |||| ||||||||| ||||||||||||||||| || |  ||| |||||||||||||||    
T  37972013 tttgtagaagctaaattagcccacctaaattggcaccggagagaatcgaacctgagac 37971956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 41908596 - 41908673
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 220  Q
    ||||||||||||||  ||||||||| |||||| || |   ||||||||||| |||||||| ||||| || ||||||||    
T  41908596 tttgaagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactcc 41908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 263
Target Start/End: Original strand, 16381704 - 16381732
Alignment:
Q  235 ataccactaggccaacccaagtgggttat 263  Q
    |||||||||||||||||||||||||||||    
T  16381704 ataccactaggccaacccaagtgggttat 16381732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 33569859 - 33569935
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaa-taccactaggccaacccaagtgggtt 261  Q
    ||||||||||||||||| |||||||| |||||| |||| |||  ||  || |||||||| ||||||||| |||||||    
T  33569859 aatcgaacctgagacctcgaggaagagcacacttccaagtcctaagccaattaccactaagccaacccatgtgggtt 33569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 24168 - 24053
Alignment:
Q  146 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 245  Q
    ||||||| ||| |||||||||  |||||| ||||  |||||||||||||||| || | || || || |||||||| || |||| ||| ||||||| ||||    
T  24168 gaagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattagg 24069  T
Q  246 ccaacccaagtgggtt 261  Q
    ||||||||||||||||    
T  24068 ccaacccaagtgggtt 24053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 112396 - 112282
Alignment:
Q  147 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 246  Q
    |||||||||| |||| |||||||||||| || |  ||| |||||||||| ||||||  | || ||||||||||||| || || ||  ||||| || ||||    
T  112396 aagaagctaaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggc 112297  T
Q  247 caacccaagtgggtt 261  Q
    |||||||||||||||    
T  112296 caacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 13021 - 13118
Alignment:
Q  160 agcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 257  Q
    |||||||| |||||||||||  ||| ||||||||||||||||| ||||| || |||||||||| ||| | ||  |||||||| | ||||||| |||||    
T  13021 agcccacccaaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 6880 - 6988
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| |||||||||  ||||||||| |  ||   |||||||||||||| | ||||| || ||||||||| | |||| ||  |||||||||    
T  6880 tttgaagaagctaaattagcccactcaaattgacaccagag---atcgaacctgagactttgaggaggagcacactccccagtcccaagccaataccact 6976  T
Q  243 aggccaacccaa 254  Q
    ||||||||||||    
T  6977 aggccaacccaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 94968 - 95044
Alignment:
Q  182 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 258  Q
    ||||||| ||||||||||||| ||||| || ||||||||||  | || ||  |||||||||||||||||||||||||    
T  94968 agataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 42479 - 42596
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    |||||||||||||| ||| ||| | ||||||| || |  ||| |||||||||||||||   ||||| || || ||||||| || || ||| |||||||||    
T  42479 tttgaagaagctaaattaaccc-cttaaattggcaccaaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccact 42577  T
Q  243 aggccaacccaagtgggtt 261  Q
    |||||||||||| ||||||    
T  42578 aggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 11603 - 11534
Alignment:
Q  186 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaag 255  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||  |||||||| |||||| ||||||    
T  11603 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 42622 - 42687
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 208  Q
    |||||||||| ||| |||||||||||||||||||| | |||| |||||||| ||||| || |||||    
T  42622 tttgaagaagttaaattagcccacctaaattgacaccatagagaatcgaacttgagatcttgagga 42687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 8639 - 8685
Alignment:
Q  182 agataatcgaacctgagacctagaggaagaccacactcccaaatccc 228  Q
    |||||||||||||| ||||||  |||| |||||||||||||||||||    
T  8639 agataatcgaacctcagacctcaaggaggaccacactcccaaatccc 8685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 25305 - 25406
Alignment:
Q  143 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 242  Q
    ||||||||||||||  |||| ||   ||||||||| |  ||||||||||||||||||||| ||| | || ||||||||||| || | ||  |||||||||    
T  25305 tttgaagaagctaaaatagctcattcaaattgacaccagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccact 25404  T
Q  243 ag 244  Q
    ||    
T  25405 ag 25406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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