View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10671_low_52 (Length: 238)
Name: NF10671_low_52
Description: NF10671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10671_low_52 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 35560444 - 35560220
Alignment:
| Q |
1 |
aagggaatctaatattcattggcttgatctaacgagaagactagactaatcactaaatgctcgatcaattgaatctctcctaagattctaacaaaaagaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
35560444 |
aagggaatctaatattcattggcttgatctaacgagaagactagactaatcactaaatgctcgatcaatcgaatctctcctaagattctaacaaaaagaa |
35560345 |
T |
|
| Q |
101 |
aggagttgcatgtgagattaatcagtcaatttcatctcgaaactttcattttcttat-aacttagtccctaaatcatgataagcagttaaaaagttctta |
199 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
35560344 |
aggagttgcatgtgagattgatcagtcaatttcatctcgaaactttcattttcttatcaacttagtccctaaatcatgataagcagttaaaaagttctta |
35560245 |
T |
|
| Q |
200 |
aacagcaaaaaatacaacagtttgt |
224 |
Q |
| |
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||||||||||||||||||||||||| |
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|
| T |
35560244 |
aacagcaaaaaatacaacagtttgt |
35560220 |
T |
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