View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10672_low_7 (Length: 338)

Name: NF10672_low_7
Description: NF10672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10672_low_7
NF10672_low_7
[»] chr1 (23 HSPs)
chr1 (32-316)||(4640528-4640802)
chr1 (32-106)||(4641736-4641810)
chr1 (39-99)||(38931321-38931381)
chr1 (26-104)||(43316351-43316429)
chr1 (31-80)||(11032219-11032268)
chr1 (31-104)||(29334213-29334286)
chr1 (39-80)||(48835097-48835138)
chr1 (32-80)||(11031431-11031479)
chr1 (39-103)||(27418171-27418234)
chr1 (39-81)||(30466189-30466231)
chr1 (32-86)||(36272541-36272595)
chr1 (32-104)||(6766974-6767046)
chr1 (19-99)||(38932109-38932189)
chr1 (39-78)||(2687729-2687768)
chr1 (32-86)||(6768112-6768166)
chr1 (30-79)||(11426851-11426900)
chr1 (39-103)||(32537652-32537716)
chr1 (39-80)||(41884229-41884270)
chr1 (31-80)||(45922231-45922280)
chr1 (31-71)||(1184977-1185017)
chr1 (141-180)||(1623946-1623986)
chr1 (39-102)||(43755856-43755919)
chr1 (32-80)||(47334900-47334948)
[»] chr6 (9 HSPs)
chr6 (31-106)||(34035018-34035093)
chr6 (39-106)||(34034175-34034242)
chr6 (46-94)||(24125986-24126034)
chr6 (39-101)||(25371176-25371238)
chr6 (30-102)||(7635122-7635194)
chr6 (39-104)||(25067826-25067891)
chr6 (32-80)||(16764925-16764973)
chr6 (39-102)||(18290222-18290285)
chr6 (39-102)||(18290473-18290536)
[»] chr4 (27 HSPs)
chr4 (29-107)||(22499095-22499173)
chr4 (39-106)||(22499948-22500015)
chr4 (39-80)||(25970113-25970154)
chr4 (26-94)||(34154788-34154856)
chr4 (32-80)||(36450728-36450776)
chr4 (46-94)||(47377584-47377632)
chr4 (39-94)||(232035-232090)
chr4 (31-94)||(23425193-23425256)
chr4 (45-80)||(34371475-34371510)
chr4 (39-94)||(39429923-39429978)
chr4 (31-94)||(39652045-39652108)
chr4 (32-94)||(39429225-39429287)
chr4 (31-80)||(38009283-38009332)
chr4 (32-80)||(45330565-45330613)
chr4 (28-103)||(23383306-23383381)
chr4 (46-80)||(6246798-6246832)
chr4 (39-101)||(34155605-34155667)
chr4 (31-80)||(25970803-25970852)
chr4 (31-80)||(33369908-33369957)
chr4 (39-80)||(33370875-33370916)
chr4 (39-103)||(39412772-39412836)
chr4 (38-79)||(55514355-55514396)
chr4 (39-102)||(5235381-5235444)
chr4 (39-102)||(20174977-20175040)
chr4 (32-80)||(30808621-30808669)
chr4 (32-80)||(47326789-47326837)
chr4 (32-80)||(47341585-47341633)
[»] chr2 (17 HSPs)
chr2 (31-104)||(7868117-7868190)
chr2 (39-103)||(36390964-36391028)
chr2 (31-102)||(5005461-5005532)
chr2 (29-86)||(34617650-34617707)
chr2 (31-94)||(20991286-20991349)
chr2 (39-94)||(36391658-36391713)
chr2 (31-106)||(38780038-38780113)
chr2 (254-300)||(41519719-41519765)
chr2 (39-80)||(6084878-6084919)
chr2 (39-80)||(23875247-23875288)
chr2 (39-79)||(23876064-23876104)
chr2 (39-94)||(20992005-20992060)
chr2 (39-100)||(15602800-15602861)
chr2 (39-79)||(6085702-6085742)
chr2 (39-102)||(16903875-16903938)
chr2 (39-102)||(30899397-30899460)
chr2 (32-80)||(37546564-37546612)
[»] chr3 (23 HSPs)
chr3 (39-103)||(45501271-45501335)
chr3 (39-80)||(49161808-49161849)
chr3 (39-103)||(8653697-8653761)
chr3 (39-94)||(51421661-51421716)
chr3 (39-80)||(33455781-33455822)
chr3 (23-80)||(53714416-53714473)
chr3 (39-103)||(8652817-8652881)
chr3 (39-101)||(33968188-33968250)
chr3 (38-74)||(26836352-26836388)
chr3 (32-80)||(43768026-43768074)
chr3 (39-94)||(43768745-43768800)
chr3 (32-103)||(44406936-44407007)
chr3 (32-99)||(51420861-51420928)
chr3 (39-101)||(45297556-45297618)
chr3 (32-106)||(52399002-52399076)
chr3 (30-102)||(5113196-5113268)
chr3 (39-103)||(20586079-20586143)
chr3 (39-80)||(33454873-33454914)
chr3 (39-102)||(20586562-20586625)
chr3 (39-102)||(26006153-26006216)
chr3 (31-102)||(45000805-45000876)
chr3 (39-79)||(49160994-49161034)
chr3 (38-106)||(52398329-52398397)
[»] scaffold2003 (1 HSPs)
scaffold2003 (31-104)||(507-580)
[»] chr7 (21 HSPs)
chr7 (39-80)||(29060739-29060780)
chr7 (39-80)||(42607088-42607129)
chr7 (34-86)||(24996677-24996729)
chr7 (39-101)||(40320389-40320451)
chr7 (38-86)||(44541702-44541750)
chr7 (39-86)||(24995859-24995906)
chr7 (32-80)||(6729398-6729446)
chr7 (32-80)||(27599211-27599259)
chr7 (32-80)||(27600095-27600143)
chr7 (31-74)||(9122649-9122692)
chr7 (39-82)||(12732254-12732297)
chr7 (39-86)||(42607806-42607853)
chr7 (34-80)||(40257802-40257848)
chr7 (31-81)||(40258733-40258783)
chr7 (39-103)||(25137419-25137483)
chr7 (39-80)||(32871140-32871181)
chr7 (39-103)||(33686933-33686997)
chr7 (39-80)||(36845202-36845243)
chr7 (39-75)||(6730162-6730198)
chr7 (59-103)||(30915761-30915805)
chr7 (39-79)||(36844619-36844659)
[»] chr5 (19 HSPs)
chr5 (39-103)||(4789527-4789591)
chr5 (29-80)||(32943514-32943565)
chr5 (32-94)||(1970501-1970562)
chr5 (33-79)||(26712389-26712435)
chr5 (33-79)||(26982127-26982173)
chr5 (32-86)||(35262452-35262506)
chr5 (29-94)||(9923385-9923450)
chr5 (39-80)||(42650764-42650805)
chr5 (39-103)||(6804898-6804962)
chr5 (31-79)||(9142046-9142094)
chr5 (39-102)||(12330155-12330218)
chr5 (32-94)||(9924110-9924171)
chr5 (31-80)||(4607136-4607185)
chr5 (39-102)||(3595784-3595847)
chr5 (215-307)||(4554858-4554949)
chr5 (38-78)||(6805959-6805999)
chr5 (39-102)||(7858334-7858397)
chr5 (39-102)||(8321365-8321428)
chr5 (39-102)||(12330640-12330703)
[»] chr8 (12 HSPs)
chr8 (32-94)||(42345394-42345456)
chr8 (39-99)||(37562302-37562362)
chr8 (32-94)||(7054090-7054152)
chr8 (30-103)||(40450963-40451036)
chr8 (31-80)||(43433810-43433859)
chr8 (39-94)||(42346091-42346146)
chr8 (39-80)||(35840530-35840571)
chr8 (39-80)||(35943083-35943124)
chr8 (39-80)||(35943839-35943880)
chr8 (46-78)||(12350656-12350688)
chr8 (31-99)||(13935034-13935102)
chr8 (32-80)||(44020043-44020091)
[»] scaffold0150 (1 HSPs)
scaffold0150 (32-74)||(14012-14054)
[»] scaffold0508 (1 HSPs)
scaffold0508 (39-102)||(4140-4203)


Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 32 - 316
Target Start/End: Original strand, 4640528 - 4640802
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaatagattatcatagacattcaacaccnnnn 131  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  4640528 ggtggagtttagcatggtaaaggggaattgtttcccaccatgggaaagtaattttcaaccattagatcaaatagattatcatagacattcaacaccaaaa 4640627  T
Q  132 nnntttctcacactcaccaccactcacccacaaacgctgctgctccaactctttttcttcatctccttcaaacctnnnnnnnnttgattttccaaaattc 231  Q
       |||||||||||||||          ||||||||||| |||||||||||||||||||||||||||||||||||        ||||||||||||||| |    
T  4640628 aattttctcacactcacc----------cacaaacgctgttgctccaactctttttcttcatctccttcaaacctaaaaaaaattgattttccaaaatcc 4640717  T
Q  232 attgccttatcactgtcattgaaatttcaatgacaaaatttcacaattaaaacaaagaaccatgtatgaggtagtaaatcctctt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4640718 attgccttatcactgtcattgaaatttcaatgacaaaatttcacaattaaaacaaagaaccatgtatgaggtagtaaatcctctt 4640802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 4641810 - 4641736
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaataga 106  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4641810 ggtggagtttagcatgggaaaggggaattgtttcccaccaagggaaagtaattttcaaccattggatcaaataga 4641736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 38931321 - 38931381
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatc 99  Q
    ||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||| ||||    
T  38931321 tttagcatgagaaaggggaattgtttcccaccatgggaaagtcaatttgaaccattagatc 38931381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 43316351 - 43316429
Alignment:
Q  26 aaatgaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaata 104  Q
    |||| |||||| |||||||||||||| ||  | |||||||||||||||||||||||| ||| | ||||| |||||||||    
T  43316351 aaatcaggtggcatttagcatgggaatggatagttgtttcccaccatgggaaagtaaattttatccatttgatcaaata 43316429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 11032268 - 11032219
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  11032268 aggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagt 11032219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 29334213 - 29334286
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaata 104  Q
    |||||| |||||||||||||| ||  | |||||||||||||||||||||||| ||| | ||||| |||||||||    
T  29334213 aggtggcatttagcatgggaatggatagttgtttcccaccatgggaaagtaaattttacccattagatcaaata 29334286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 48835138 - 48835097
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  48835138 tttagcatgggaaaggggaattgttttccaccatgggaaagt 48835097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 11031431 - 11031479
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  11031431 ggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagt 11031479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 27418171 - 27418234
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    ||||| ||||||||||| |||||||||||||||||  ||||||||||| ||||||| ||||||||    
T  27418171 tttagtatgggaaaggg-aattgtttcccaccatgaaaaagtaatttttaaccattagatcaaat 27418234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 30466189 - 30466231
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagta 81  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  30466189 tttagcatgggaatggggagttgtttcccaccatgggaaagta 30466231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 36272595 - 36272541
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaatttt 86  Q
    ||||| |||||||||||||| ||| | ||||||||||||||||||||||| ||||    
T  36272595 ggtggcatttagcatgggaatgggaacttgtttcccaccatgggaaagtattttt 36272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 6766974 - 6767046
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaata 104  Q
    |||||| ||||| |||| ||||||||||||||| ||| ||||| |||||  |||| ||||||| |||||||||    
T  6766974 ggtggagtttagtatggaaaaggggaattgttttccatcatggaaaagttttttttaaccattagatcaaata 6767046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 38932189 - 38932109
Alignment:
Q  19 atgttaaaaatgaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatc 99  Q
    |||||||| | | ||||| ||||||||||||||| || | |||||| ||||||| ||||||| ||||| ||||||| ||||    
T  38932189 atgttaaagaagtggtggcatttagcatgggaaaaggaagttgttttccaccataggaaagtcatttttaaccattagatc 38932109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 2687768 - 2687729
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaa 78  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  2687768 tttagcatgggaaaggataattgtttcccaccatgggaaa 2687729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 6768166 - 6768112
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaatttt 86  Q
    ||||| |||||||||||||| ||| | || |||||||||||||||||||| ||||    
T  6768166 ggtggcatttagcatgggaatgggaacttatttcccaccatgggaaagtattttt 6768112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 11426851 - 11426900
Alignment:
Q  30 gaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaag 79  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||||||||||    
T  11426851 gaggtggcatttagcatggaaaagggaaagagtttcccaccatgggaaag 11426900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 32537652 - 32537716
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaat 103  Q
    |||| |||||||||||  |||| |||||||||||||||||| || |||| ||||||||||||||||    
T  32537652 tttaacatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattggatcaaat 32537716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 41884270 - 41884229
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||||||| |||||| |||||||||||||||| |||||||    
T  41884270 tttagcatggaaaagggaaattgtttcccaccataggaaagt 41884229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 45922231 - 45922280
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||| |||| ||||||||||||   ||||||||||||||||||||||    
T  45922231 aggtggagtttaacatgggaaagggaggttgtttcccaccatgggaaagt 45922280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 1185017 - 1184977
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccacca 71  Q
    ||||||| |||||||||||||||||||||  ||||||||||    
T  1185017 aggtggagtttagcatgggaaaggggaatcctttcccacca 1184977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 1623986 - 1623946
Alignment:
Q  141 acactcaccaccactcacccacaaac-gctgctgctccaac 180  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  1623986 acactcaccaccactcacccacaaacggctgctgatccaac 1623946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 43755856 - 43755919
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  43755856 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 43755919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 47334948 - 47334900
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||| |||||| |||||||| |||| |||||||||||||| |||||||    
T  47334948 ggtggcatttagtatgggaaaagggagttgtttcccaccataggaaagt 47334900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 34035093 - 34035018
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaataga 106  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  34035093 aggtggagtttaacatgggaaaggagaattgtttcccatcatgggaaagttattttaaaccattggatcaaataga 34035018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 34034175 - 34034242
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaataga 106  Q
    |||| ||||||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  34034175 tttaacatgggaaaggagaattgcttcccaccatgggaaagttattttaaaccattggatcaaataga 34034242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 24125986 - 24126034
Alignment:
Q  46 tgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    |||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  24125986 tgggaaaggggagttgtttcccaccatgggaaagttattttcagccatt 24126034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 25371176 - 25371238
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaa 101  Q
    ||||||||||||||| | | |||||||||||||||||||| || ||||  |||||| ||||||    
T  25371176 tttagcatgggaaagtgaacttgtttcccaccatgggaaaatattttttgaccattagatcaa 25371238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 7635122 - 7635194
Alignment:
Q  30 gaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    |||||| | ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  7635122 gaggtgaagtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 7635194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 25067891 - 25067826
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaata 104  Q
    ||||||||||||||||  | |||||||||||||| |||||||  ||||   |||||||||||||||    
T  25067891 tttagcatgggaaaggatatttgtttcccaccataggaaagttgtttttgtccattggatcaaata 25067826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 16764925 - 16764973
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| ||||||||||||||||  | ||||||||||||||||| ||||    
T  16764925 ggtggagtttagcatgggaaaggaaagttgtttcccaccatggggaagt 16764973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 18290222 - 18290285
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    |||||||||||||| |  |||| |||||||||||||||||| ||||||| ||||||| |||||||    
T  18290222 tttagcatgggaaaagctaatt-tttcccaccatgggaaagttaatttttaaccattagatcaaa 18290285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 18290536 - 18290473
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  18290536 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 18290473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 22499095 - 22499173
Alignment:
Q  29 tgaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaatagat 107  Q
    ||||||||| |||| ||||||||||| ||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||    
T  22499095 tgaggtggagtttaacatgggaaaggagaattgttttccatcatgggaaagttattttaaaccattggatcaaatagat 22499173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 22500015 - 22499948
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaataga 106  Q
    |||| ||||||||||| ||||||||| ||||||| ||||||| ||||| |||||||||||||||||||    
T  22500015 tttaacatgggaaaggagaattgttttccaccataggaaagttattttaaaccattggatcaaataga 22499948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 25970113 - 25970154
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  25970113 tttagcatgggaaaggggagttgtttcccaccatgggaaagt 25970154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 34154788 - 34154856
Alignment:
Q  26 aaatgaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    |||| ||||||  |||||||||||||| |  | ||||||||||||||||||||||| ||||||||||||    
T  34154788 aaattaggtggggtttagcatgggaaaagaaacttgtttcccaccatgggaaagtatttttcaaccatt 34154856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 36450728 - 36450776
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  36450728 ggtggtatttagcatgggaaaggggagttgttttccaccatgggaaagt 36450776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 47377632 - 47377584
Alignment:
Q  46 tgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    |||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  47377632 tgggaaaggggagttgtttcccaccatgggaaagttattttcagccatt 47377584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 232090 - 232035
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||| ||||||||||| | |||||||||||||||||||||||| ||| |||||||    
T  232090 tttagtatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccatt 232035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 23425256 - 23425193
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    |||||| |||||| ||||||| || || ||||||||||||||||||||||  ||||||||||||    
T  23425256 aggtggcatttagtatgggaatggagagttgtttcccaccatgggaaagtttttttcaaccatt 23425193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 80
Target Start/End: Original strand, 34371475 - 34371510
Alignment:
Q  45 atgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||||||||||||||||||||||    
T  34371475 atgggaaaggggaattgtttcccaccatgggaaagt 34371510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 39429978 - 39429923
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||||||||||| || || ||||||||||||||||||||||  ||||||||||||    
T  39429978 tttagcatgggaatggagagttgtttcccaccatgggaaagtttttttcaaccatt 39429923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 39652108 - 39652045
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    |||||| |||||||||||||| || || ||||||| ||||||||||||||  ||||||||||||    
T  39652108 aggtggcatttagcatgggaatggagagttgtttctcaccatgggaaagtttttttcaaccatt 39652045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 39429225 - 39429287
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||| |||||||||||||| || || |||||||| |||||||||||||  ||||||||||||    
T  39429225 ggtggcatttagcatgggaatggagagttgtttcctaccatgggaaagtttttttcaaccatt 39429287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 38009283 - 38009332
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| |||||||||||||||||  |||||||||||||||||| |||||    
T  38009283 aggtgggatttagcatgggaaaggataattgtttcccaccatggaaaagt 38009332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 45330565 - 45330613
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||||||||  ||||||||||||| |||||||||||||||| |||||    
T  45330565 ggtggaatttaaaatgggaaaggggagttgtttcccaccatggaaaagt 45330613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 23383306 - 23383381
Alignment:
Q  28 atgaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    |||||||||  ||||| ||| |||||| || |||||||||||||||||||||| | ||| | ||||| ||||||||    
T  23383306 atgaggtggggtttagaatgagaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaaat 23383381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 6246798 - 6246832
Alignment:
Q  46 tgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||||||| ||||||||||||||||||||||||    
T  6246798 tgggaaagggaaattgtttcccaccatgggaaagt 6246832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 34155667 - 34155605
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaa 101  Q
    ||||||||||||||||| | |||||| ||||||||| |||||| ||||  |||||| ||||||    
T  34155667 tttagcatgggaaagggaacttgttttccaccatggaaaagtattttttgaccattagatcaa 34155605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 25970852 - 25970803
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| |||||| |||||||| |||| ||||||||||||||| ||||||    
T  25970852 aggtggcatttagtatgggaaaagggagttgtttcccaccatgagaaagt 25970803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 33369908 - 33369957
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| ||||||||||||||| |  | ||||||||||||||||||||||    
T  33369908 aggtgggatttagcatgggaaatgatatttgtttcccaccatgggaaagt 33369957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 33370916 - 33370875
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||  | ||||||||||||||||||||||    
T  33370916 tttagcatgggaaaggatacttgtttcccaccatgggaaagt 33370875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 39412772 - 39412836
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaa-ttttcaaccattggatcaaat 103  Q
    ||||||||||||||||  |||| ||||||| ||||||||||| | |||| ||||||||||||||||    
T  39412772 tttagcatgggaaaggctaatt-tttcccatcatgggaaagttagtttttaaccattggatcaaat 39412836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 55514396 - 55514355
Alignment:
Q  38 atttagcatgggaaaggggaattgtttcccaccatgggaaag 79  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  55514396 atttagcatgggaaaggaaagttgtttcccaccatgggaaag 55514355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 5235381 - 5235444
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  5235381 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 5235444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 20174977 - 20175040
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  20174977 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 20175040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 30808621 - 30808669
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||| |||||  |||||||||| || ||||||||||||||||||||||    
T  30808621 ggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaagt 30808669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 47326837 - 47326789
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| | ||||||||||||||  | ||||||||||||||||||||||    
T  47326837 ggtggagtatagcatgggaaaggaaagttgtttcccaccatgggaaagt 47326789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 47341633 - 47341585
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| | ||||||||||||||  | ||||||||||||||||||||||    
T  47341633 ggtggagtatagcatgggaaaggaaagttgtttcccaccatgggaaagt 47341585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 7868190 - 7868117
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaata 104  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||| ||||| | |||||||||    
T  7868190 aggtgggatttagcatgagaaaggggagttgtttcccaccatgggaaagtaaattttaaccactagatcaaata 7868117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 36390964 - 36391028
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    ||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||| ||||||||    
T  36390964 tttagcatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagatcaaat 36391028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 5005461 - 5005532
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaa 102  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||| || |   |||||||||||||||    
T  5005461 aggtggcatttagcatgggaaaggggaattgtttcccatcatgggaaagcaaatcataaccattggatcaaa 5005532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 34617650 - 34617707
Alignment:
Q  29 tgaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaatttt 86  Q
    ||||||||  ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  34617650 tgaggtggggtttagcatgggaaaggataattgtttcccaccatgggaaagttatttt 34617707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 20991286 - 20991349
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    |||||| |||||||||||||| || || |||||| |||||||||||||||  ||||||||||||    
T  20991286 aggtggcatttagcatgggaatggagagttgttttccaccatgggaaagtttttttcaaccatt 20991349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 36391713 - 36391658
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||| ||| |||||||    
T  36391713 tttagtatgggaaaggggagttgttttccaccatgggaaagtaaattttaaccatt 36391658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 38780113 - 38780038
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaataga 106  Q
    ||||||| |||| ||||||||||| |||||| || ||| ||||||||||| ||||| ||  |||||||||||||||    
T  38780113 aggtggagtttaacatgggaaaggagaattgctttccatcatgggaaagttattttaaattattggatcaaataga 38780038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 41519765 - 41519719
Alignment:
Q  254 aatttcaatgacaaaatttcacaattaaaacaaagaaccatgtatga 300  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||    
T  41519765 aatttcaatggcaaaatttcacaattaaaatgaagaaccatgtatga 41519719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 6084878 - 6084919
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  6084878 tttaacatgggaaaggggaattgtttcccatcatgggaaagt 6084919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 23875247 - 23875288
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  23875247 tttagcatgggaaaggggaattgtttcgcatcatgggaaagt 23875288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 23876104 - 23876064
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag 79  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  23876104 tttagcatgggaaatgggagttgtttcccaccatgggaaag 23876064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 20992060 - 20992005
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||||||||||| || || |||||| |||||||||||||||  ||||||||||||    
T  20992060 tttagcatgggaatggagagttgttttccaccatgggaaagtttttttcaaccatt 20992005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 15602861 - 15602800
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatca 100  Q
    |||||||| |||||||| | |||||||||||||||||||| || ||||  |||||| |||||    
T  15602861 tttagcataggaaagggaagttgtttcccaccatgggaaaatattttttgaccattagatca 15602800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 6085742 - 6085702
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag 79  Q
    |||||||||||||||| || |||||||| ||||||||||||    
T  6085742 tttagcatgggaaaggtgagttgtttcctaccatgggaaag 6085702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 16903938 - 16903875
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  16903938 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 16903875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 30899397 - 30899460
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  30899397 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 30899460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 37546612 - 37546564
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||| |||||  ||||||||||||| |||||||||| |||||||||||    
T  37546612 ggtggcatttaaaatgggaaaggggagttgtttcccatcatgggaaagt 37546564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 45501335 - 45501271
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||    
T  45501335 tttagtatgggaaaggggagttgttttccaccatgggaaagtaaatttaaaccattggatcaaat 45501271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 49161849 - 49161808
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  49161849 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 49161808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 8653761 - 8653697
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    |||||||||| ||||||| |||||||||||||||| |||||||| ||| ||||||| ||||||||    
T  8653761 tttagcatggaaaagggggattgtttcccaccatgagaaagtaaattttaaccatttgatcaaat 8653697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 51421716 - 51421661
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||||||| |||||||||||||||||||||||||||||||| | ||| |||||||    
T  51421716 tttagcatgagaaaggggaattgtttcccaccatgggaaagtcaatttgaaccatt 51421661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 33455822 - 33455781
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  33455822 tttagcatgggaaaggggaattgtttcccaccataggaaagt 33455781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 53714473 - 53714416
Alignment:
Q  23 taaaaatgaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| |||||||| ||||||||||||||||| |||| |||||||| ||||||||||    
T  53714473 taaaaaggaggtggagtttagcatgggaaagggaaattctttcccactatgggaaagt 53714416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 8652817 - 8652881
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||  |||||| ||| ||||    
T  8652817 tttagcatgggaaaggggaatcggttcccaccatgggaaagtaaattttcaccatttgattaaat 8652881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 33968188 - 33968250
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaa 101  Q
    ||||||||||||||||| | |||||||||||||||||||| || ||||  |||||| ||||||    
T  33968188 tttagcatgggaaagggaacttgtttcccaccatgggaaaatattttttgaccattagatcaa 33968250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 26836352 - 26836388
Alignment:
Q  38 atttagcatgggaaaggggaattgtttcccaccatgg 74  Q
    ||||||||||||||||||||||||||||||| |||||    
T  26836352 atttagcatgggaaaggggaattgtttcccatcatgg 26836388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 43768026 - 43768074
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||| |||||||||||||| || || ||||||||||||||||||||||    
T  43768026 ggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagt 43768074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 43768800 - 43768745
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||||||||||| || || |||||| |||||||||||||||  ||||||||||||    
T  43768800 tttagcatgggaatggagagttgttttccaccatgggaaagtttttttcaaccatt 43768745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 44407007 - 44406936
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    ||||| ||||||||||||||  |  | |||||||||||||||||||||||| ||| | ||||| ||||||||    
T  44407007 ggtggcatttagcatgggaatagatagttgtttcccaccatgggaaagtaaattttacccattagatcaaat 44406936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 51420861 - 51420928
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatc 99  Q
    ||||| ||||||||||||||| || | |||||| ||||||| ||||||| ||||| ||||||| ||||    
T  51420861 ggtggcatttagcatgggaaaaggaagttgttttccaccataggaaagtcatttttaaccattagatc 51420928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 45297556 - 45297618
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaa 101  Q
    ||||| |||||||||| || |||||||||| |||||||||||  |||| ||||||| ||||||    
T  45297556 tttagtatgggaaaggagagttgtttcccatcatgggaaagttttttttaaccattagatcaa 45297618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 52399076 - 52399002
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaataga 106  Q
    ||||| ||||||||||| |||||| ||  |||||||| ||||||||||||| |||  |||||| ||| |||||||    
T  52399076 ggtggcatttagcatggaaaagggaaagagtttcccatcatgggaaagtaaattttgaccattagattaaataga 52399002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 5113196 - 5113268
Alignment:
Q  30 gaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    |||||| | ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  5113196 gaggtgaagtttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 5113268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 20586079 - 20586143
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaat 103  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| ||||||||    
T  20586079 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaat 20586143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 33454873 - 33454914
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||  ||||||||||||||||| ||||||    
T  33454873 tttagcatgggaaaggaaaattgtttcccaccatgagaaagt 33454914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 20586625 - 20586562
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  20586625 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 20586562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 26006153 - 26006216
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  26006153 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 26006216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 45000876 - 45000805
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||| ||||||| ||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  45000876 aggtgaaatttagaatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 45000805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 49160994 - 49161034
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag 79  Q
    ||||||||||||||||||| |||||||| ||||||| ||||    
T  49160994 tttagcatgggaaaggggagttgtttcctaccatggaaaag 49161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 52398329 - 52398397
Alignment:
Q  38 atttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaataga 106  Q
    |||||| |||| |||||| ||  |||||||||||||| ||||||| ||| ||||||| ||| |||||||    
T  52398329 atttagaatggaaaagggaaagagtttcccaccatggaaaagtaaattttaaccattagattaaataga 52398397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2003 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 580 - 507
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaata 104  Q
    |||||| ||| |||||||||||||||| |||||||||||||||| ||||||| ||| ||||| | |||||||||    
T  580 aggtgggattaagcatgggaaaggggagttgtttcccaccatggaaaagtaaattttaaccactagatcaaata 507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 29060780 - 29060739
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29060780 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 29060739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 42607088 - 42607129
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42607088 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 42607129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 24996729 - 24996677
Alignment:
Q  34 tggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaatttt 86  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  24996729 tggagtttagcatgggaaaggggagttgtttcccaccatgggaaagtattttt 24996677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 40320451 - 40320389
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaa 101  Q
    |||||||||||||||| || |||||||||||||||| |||||  |||||||||||| ||||||    
T  40320451 tttagcatgggaaaggagagttgtttcccaccatggaaaagtttttttcaaccattagatcaa 40320389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 44541750 - 44541702
Alignment:
Q  38 atttagcatgggaaaggggaattgtttcccaccatgggaaagtaatttt 86  Q
    |||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  44541750 atttagcatgggaaagtggaattgtttccgaccatgggaaagtattttt 44541702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 24995859 - 24995906
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaatttt 86  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  24995859 tttagaatgggaaaggggagttgtttcccaccatgggaaagtattttt 24995906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 6729398 - 6729446
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||| ||||||||||||||||| ||||||||| |||| ||||||||||    
T  6729398 ggtgggatttagcatgggaaaggagaattgttttccactatgggaaagt 6729446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 27599211 - 27599259
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||| |||||  ||||||||||||| ||||||||||||||||||||||    
T  27599211 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagt 27599259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 27600143 - 27600095
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||| |||||  ||||||||||||| ||||||||||||||||||||||    
T  27600143 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagt 27600095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 9122649 - 9122692
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgg 74  Q
    |||||| |||||||||||||||||| | ||||||||||||||||    
T  9122649 aggtggcatttagcatgggaaagggaagttgtttcccaccatgg 9122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 12732254 - 12732297
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaa 82  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||    
T  12732254 tttagcatgggaaagggaaagagtttcccaccatgggaaagtaa 12732297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 42607853 - 42607806
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaatttt 86  Q
    |||||||||| ||||||||||||||||||| ||| ||||||| |||||    
T  42607853 tttagcatggaaaaggggaattgtttcccatcataggaaagttatttt 42607806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 40257848 - 40257802
Alignment:
Q  34 tggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||| |||||||||||||| |||| ||||||||||||||| ||||||    
T  40257848 tggagtttagcatgggaaatgggagttgtttcccaccatgagaaagt 40257802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 40258783 - 40258733
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagta 81  Q
    ||||||| |||||||||||||| |  ||||||||| |||||||||||||||    
T  40258783 aggtggagtttagcatgggaaatgataattgtttctcaccatgggaaagta 40258733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 25137419 - 25137483
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaat 103  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| ||||||||    
T  25137419 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaat 25137483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 32871181 - 32871140
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||| ||||| |||||||||||||| |||||||    
T  32871181 tttagcatgggaatggggagttgtttcccaccataggaaagt 32871140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 33686933 - 33686997
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaat 103  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| |||||| |||||||||    
T  33686933 tttagcatgggaaaggttaatt-tttcccaccatgggaaagttagtttttaaccatcggatcaaat 33686997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 36845243 - 36845202
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||||||||||||| || ||||| |||||    
T  36845243 tttagcatgggaaaggggaattgtttctcatcatggaaaagt 36845202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 6730198 - 6730162
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatggg 75  Q
    ||||||||||||||||| | |||||||||||||||||    
T  6730198 tttagcatgggaaagggaagttgtttcccaccatggg 6730162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 30915761 - 30915805
Alignment:
Q  59 ttgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    |||||||||||||||||||||||| ||| | ||||| ||||||||    
T  30915761 ttgtttcccaccatgggaaagtaaattttacccattagatcaaat 30915805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 36844619 - 36844659
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag 79  Q
    |||||||||||||||| || ||||||||||||||| |||||    
T  36844619 tttagcatgggaaaggtgagttgtttcccaccatgagaaag 36844659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 4789527 - 4789591
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| |  |||||| ||||||||    
T  4789527 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaat 4789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 32943514 - 32943565
Alignment:
Q  29 tgaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||||||||    
T  32943514 tgaggtgggatttagcatgggaaaggatatttgtttcccaccatgggaaagt 32943565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 1970562 - 1970501
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||| |||||||||||||| || || ||||||||||||||||||||||  ||||||||||||    
T  1970562 ggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagt-tttttcaaccatt 1970501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 26712435 - 26712389
Alignment:
Q  33 gtggaatttagcatgggaaaggggaattgtttcccaccatgggaaag 79  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||    
T  26712435 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaag 26712389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 26982173 - 26982127
Alignment:
Q  33 gtggaatttagcatgggaaaggggaattgtttcccaccatgggaaag 79  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||    
T  26982173 gtggagtttagcatgggaaagggaagttgtttcccaccatgggaaag 26982127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 35262452 - 35262506
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaatttt 86  Q
    |||||| ||||||||||||||||  |||||||||| ||||||||||||| |||||    
T  35262452 ggtggagtttagcatgggaaaggataattgtttcctaccatgggaaagttatttt 35262506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 9923385 - 9923450
Alignment:
Q  29 tgaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||||||  ||||||||||||| || || |||||||||||||||| |||||  ||||||||||||    
T  9923385 tgaggtggggtttagcatgggaatggagagttgtttcccaccatggaaaagtttttttcaaccatt 9923450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 42650764 - 42650805
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  42650764 tttagcatgggaaaggggaattgtttttcaccatgggaaagt 42650805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 6804898 - 6804962
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    ||||||||||||||| ||| |||||||||||||||| |||||| ||||  |||||  ||||||||    
T  6804898 tttagcatgggaaagaggagttgtttcccaccatggaaaagtactttttgaccatcagatcaaat 6804962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 9142046 - 9142094
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaag 79  Q
    |||||| |||||| ||||||||||| | |||||||||||||||||||||    
T  9142046 aggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 9142094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 12330155 - 12330218
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| ||||||| ||||||| |||||||    
T  12330155 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttaatttttaaccattagatcaaa 12330218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 9924171 - 9924110
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||| |||||||||||||  || || ||||||||||||||||||||||  ||||||||||||    
T  9924171 ggtggcatttagcatgggat-ggagagttgtttcccaccatgggaaagtttttttcaaccatt 9924110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 4607185 - 4607136
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| |||||||||||||| || || ||||||||||||||| ||||||    
T  4607185 aggtggcatttagcatgggaatggagagttgtttcccaccatgagaaagt 4607136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 3595784 - 3595847
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  3595784 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 3595847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 4554858 - 4554949
Alignment:
Q  215 ttgattttccaaaattcattgccttatcactgtcattgaaatttcaatgacaaaatttcacaattaaaacaaagaaccatgtatgaggtagta 307  Q
    ||||||||||||||  |||| |||| |||| |||| |  || ||||||  ||||||||||| |||||||  ||||||| ||||||||||||||    
T  4554858 ttgattttccaaaac-cattcccttgtcaccgtcagttcaacttcaatagcaaaatttcactattaaaatgaagaaccgtgtatgaggtagta 4554949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 6805999 - 6805959
Alignment:
Q  38 atttagcatgggaaaggggaattgtttcccaccatgggaaa 78  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  6805999 atttagcatgggaaagggaaagagtttcccaccatgggaaa 6805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 7858334 - 7858397
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  7858334 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 7858397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 8321428 - 8321365
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  8321428 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 8321365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 12330703 - 12330640
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  12330703 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 12330640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 42345394 - 42345456
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||| |||||||||||||| || || ||||||||||||||||||||||  ||||||||||||    
T  42345394 ggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagtttttttcaaccatt 42345456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 37562302 - 37562362
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatc 99  Q
    |||||||||||||||| ||||||||||||||||| ||||||| | ||| ||||||| ||||    
T  37562302 tttagcatgggaaaggagaattgtttcccaccataggaaagtcaattttaaccattagatc 37562362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 7054090 - 7054152
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||| |||||||||||||| || || |||||||||||||||| |||||  ||||||||||||    
T  7054090 ggtggcatttagcatgggaatggagagttgtttcccaccatggaaaagtttttttcaaccatt 7054152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 40451036 - 40450963
Alignment:
Q  30 gaggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatcaaat 103  Q
    |||||||  ||||| |||||||| |  | |||||||||||||||||||||||| ||| ||||||| ||||||||    
T  40451036 gaggtggggtttagtatgggaaatgtaagttgtttcccaccatgggaaagtaaattttaaccattagatcaaat 40450963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 43433810 - 43433859
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||| ||||| ||||||||||||||||  |||||||||||||||||||    
T  43433810 aggtggcatttaacatgggaaaggggaatcatttcccaccatgggaaagt 43433859  T

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Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 42346146 - 42346091
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccatt 94  Q
    ||||||||||||| || || |||||||||| |||||||||||  ||||||||||||    
T  42346146 tttagcatgggaatggagagttgtttcccatcatgggaaagtttttttcaaccatt 42346091  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 35840571 - 35840530
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||| | ||||||||||| ||||||||||    
T  35840571 tttagcatgggaaagggaagttgtttcccacgatgggaaagt 35840530  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 35943083 - 35943124
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||||||||| | ||||||||||||||||| ||||    
T  35943083 tttagcatgggaaagggaagttgtttcccaccatggggaagt 35943124  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 35943880 - 35943839
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    |||||||||||||||| |||||||||||||| |||| |||||    
T  35943880 tttagcatgggaaaggagaattgtttcccactatggaaaagt 35943839  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 12350688 - 12350656
Alignment:
Q  46 tgggaaaggggaattgtttcccaccatgggaaa 78  Q
    |||||||||| ||||||||||||||||||||||    
T  12350688 tgggaaagggaaattgtttcccaccatgggaaa 12350656  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 13935102 - 13935034
Alignment:
Q  31 aggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagtaattttcaaccattggatc 99  Q
    |||||| |||||||||||||||||  | |||||| ||||||| ||||||| | ||| ||||||| ||||    
T  13935102 aggtggcatttagcatgggaaaggaaagttgttttccaccataggaaagtcacttttaaccattagatc 13935034  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 44020043 - 44020091
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgggaaagt 80  Q
    ||||||||||| |||||||||||| |||||||||| | ||||| |||||    
T  44020043 ggtggaatttaacatgggaaagggaaattgtttcctaacatggaaaagt 44020091  T

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Target: scaffold0150 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 14012 - 14054
Alignment:
Q  32 ggtggaatttagcatgggaaaggggaattgtttcccaccatgg 74  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  14012 ggtgggatttagcatgggaaaggggagttgtttcccaccatgg 14054  T

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Target: scaffold0508 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 4140 - 4203
Alignment:
Q  39 tttagcatgggaaaggggaattgtttcccaccatgggaaag-taattttcaaccattggatcaaa 102  Q
    ||||||||||||||||  |||| |||||||||||||||||| || |||| ||||||| |||||||    
T  4140 tttagcatgggaaaggctaatt-tttcccaccatgggaaagttagtttttaaccattagatcaaa 4203  T

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