View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10673_low_3 (Length: 481)

Name: NF10673_low_3
Description: NF10673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10673_low_3
NF10673_low_3
[»] chr4 (38 HSPs)
chr4 (15-294)||(40379492-40379771)
chr4 (326-443)||(40379822-40379938)
chr4 (242-306)||(38944384-38944448)
chr4 (231-307)||(46343379-46343455)
chr4 (231-307)||(28758427-28758503)
chr4 (231-307)||(36752409-36752484)
chr4 (366-435)||(40390558-40390629)
chr4 (237-307)||(7413148-7413217)
chr4 (237-307)||(7459228-7459297)
chr4 (233-307)||(42550425-42550499)
chr4 (233-307)||(47462039-47462112)
chr4 (233-307)||(54086063-54086136)
chr4 (234-307)||(39585384-39585455)
chr4 (231-307)||(13389070-13389145)
chr4 (231-307)||(33530269-33530345)
chr4 (231-307)||(35615935-35616010)
chr4 (259-307)||(37340110-37340158)
chr4 (239-307)||(40597520-40597588)
chr4 (231-307)||(49421742-49421818)
chr4 (256-307)||(32057726-32057777)
chr4 (240-307)||(37759488-37759555)
chr4 (233-307)||(51281518-51281593)
chr4 (233-307)||(25586330-25586403)
chr4 (233-307)||(28033244-28033317)
chr4 (233-307)||(28983784-28983857)
chr4 (233-307)||(31263504-31263577)
chr4 (233-307)||(31375165-31375238)
chr4 (233-307)||(37050753-37050826)
chr4 (233-307)||(42411991-42412064)
chr4 (234-307)||(24870650-24870723)
chr4 (231-307)||(579245-579320)
chr4 (233-269)||(5880326-5880362)
chr4 (231-307)||(16476940-16477015)
chr4 (231-307)||(24712138-24712213)
chr4 (231-307)||(34684252-34684327)
chr4 (242-306)||(35338251-35338315)
chr4 (231-307)||(46107443-46107519)
chr4 (255-307)||(51578970-51579022)
[»] scaffold0160 (1 HSPs)
scaffold0160 (231-307)||(22132-22208)
[»] chr5 (32 HSPs)
chr5 (234-305)||(6525892-6525963)
chr5 (231-303)||(41215241-41215313)
chr5 (234-307)||(1271150-1271223)
chr5 (231-307)||(19867284-19867359)
chr5 (231-307)||(35619144-35619220)
chr5 (233-307)||(5203603-5203678)
chr5 (233-307)||(9053974-9054047)
chr5 (233-307)||(11968828-11968901)
chr5 (233-307)||(24051455-24051528)
chr5 (234-307)||(4874248-4874320)
chr5 (231-300)||(26526563-26526632)
chr5 (231-307)||(4429944-4430019)
chr5 (231-307)||(10083931-10084007)
chr5 (231-307)||(20695486-20695561)
chr5 (232-307)||(14126954-14127028)
chr5 (233-307)||(27003966-27004041)
chr5 (233-307)||(1833322-1833395)
chr5 (233-307)||(23311176-23311249)
chr5 (233-307)||(34856633-34856706)
chr5 (233-307)||(36245997-36246070)
chr5 (231-293)||(36259847-36259908)
chr5 (233-307)||(40318788-40318861)
chr5 (233-307)||(40596008-40596081)
chr5 (234-307)||(13952287-13952360)
chr5 (231-307)||(671062-671137)
chr5 (231-307)||(4165009-4165084)
chr5 (255-302)||(5548916-5548964)
chr5 (235-307)||(10393505-10393576)
chr5 (243-307)||(11408435-11408499)
chr5 (231-307)||(26802384-26802459)
chr5 (231-307)||(26809934-26810009)
chr5 (231-307)||(26824961-26825036)
[»] chr1 (34 HSPs)
chr1 (229-307)||(27227131-27227209)
chr1 (234-307)||(11080963-11081036)
chr1 (231-307)||(236620-236694)
chr1 (231-307)||(35068924-35069000)
chr1 (232-307)||(7204510-7204585)
chr1 (231-292)||(8793192-8793253)
chr1 (231-307)||(44836120-44836196)
chr1 (231-307)||(2208900-2208973)
chr1 (233-307)||(8193965-8194038)
chr1 (233-307)||(15331065-15331138)
chr1 (233-307)||(42630988-42631061)
chr1 (233-307)||(47429595-47429668)
chr1 (233-307)||(49948293-49948366)
chr1 (233-307)||(48302336-48302411)
chr1 (275-307)||(16867402-16867434)
chr1 (257-297)||(27113715-27113755)
chr1 (231-283)||(29511158-29511209)
chr1 (231-307)||(37186819-37186895)
chr1 (231-307)||(41651123-41651199)
chr1 (231-266)||(5790108-5790143)
chr1 (248-307)||(26856859-26856917)
chr1 (257-307)||(37315056-37315106)
chr1 (233-307)||(39606457-39606530)
chr1 (233-307)||(40958577-40958650)
chr1 (231-307)||(2112797-2112872)
chr1 (231-307)||(5598351-5598426)
chr1 (234-306)||(8050535-8050606)
chr1 (231-307)||(12176546-12176622)
chr1 (239-307)||(12500538-12500605)
chr1 (231-287)||(27078598-27078653)
chr1 (231-307)||(27856047-27856122)
chr1 (231-307)||(49632605-49632680)
chr1 (231-307)||(50145135-50145210)
chr1 (231-307)||(50248079-50248154)
[»] chr2 (29 HSPs)
chr2 (231-307)||(22382335-22382411)
chr2 (231-307)||(22914361-22914437)
chr2 (231-307)||(22999125-22999201)
chr2 (239-307)||(39417500-39417568)
chr2 (231-306)||(13491076-13491151)
chr2 (256-307)||(18741400-18741451)
chr2 (231-306)||(19954903-19954976)
chr2 (231-299)||(32517828-32517896)
chr2 (239-306)||(9993228-9993295)
chr2 (233-307)||(43461337-43461410)
chr2 (231-307)||(5618445-5618520)
chr2 (231-303)||(33898281-33898351)
chr2 (231-307)||(40710837-40710913)
chr2 (231-307)||(45049435-45049510)
chr2 (232-307)||(41164651-41164725)
chr2 (231-309)||(17052607-17052685)
chr2 (258-307)||(637041-637090)
chr2 (242-307)||(8293558-8293622)
chr2 (231-307)||(816396-816472)
chr2 (231-307)||(13267978-13268053)
chr2 (231-307)||(15897264-15897339)
chr2 (231-307)||(15920617-15920692)
chr2 (231-307)||(18055909-18055984)
chr2 (235-307)||(23497515-23497586)
chr2 (231-307)||(23957102-23957177)
chr2 (231-307)||(31671214-31671290)
chr2 (231-307)||(36685406-36685481)
chr2 (232-300)||(37103373-37103441)
chr2 (231-307)||(40812067-40812142)
[»] chr8 (27 HSPs)
chr8 (231-307)||(15589258-15589332)
chr8 (231-307)||(32778548-32778624)
chr8 (231-307)||(33128167-33128243)
chr8 (231-287)||(40418178-40418234)
chr8 (234-307)||(5700650-5700724)
chr8 (233-307)||(10096664-10096737)
chr8 (233-307)||(19649501-19649574)
chr8 (233-307)||(20662574-20662647)
chr8 (233-307)||(37817428-37817501)
chr8 (231-299)||(11109867-11109935)
chr8 (255-307)||(24197830-24197882)
chr8 (233-307)||(24242586-24242661)
chr8 (233-307)||(32922873-32922950)
chr8 (232-306)||(24732304-24732378)
chr8 (233-307)||(35810289-35810362)
chr8 (233-307)||(37295178-37295251)
chr8 (234-307)||(10926089-10926161)
chr8 (234-307)||(16395426-16395498)
chr8 (231-307)||(4430738-4430813)
chr8 (231-307)||(6317350-6317425)
chr8 (233-307)||(6844988-6845059)
chr8 (243-307)||(18641496-18641560)
chr8 (231-307)||(20150271-20150346)
chr8 (231-307)||(27817452-27817527)
chr8 (233-307)||(36586534-36586607)
chr8 (255-307)||(37820896-37820948)
chr8 (231-307)||(38953483-38953558)
[»] chr3 (26 HSPs)
chr3 (234-307)||(37278538-37278611)
chr3 (231-310)||(38417724-38417803)
chr3 (255-307)||(4659612-4659664)
chr3 (231-307)||(27845117-27845193)
chr3 (231-307)||(54923536-54923612)
chr3 (239-306)||(10662042-10662108)
chr3 (234-307)||(27157978-27158051)
chr3 (235-307)||(7552649-7552720)
chr3 (231-307)||(21129096-21129172)
chr3 (275-307)||(39948619-39948651)
chr3 (236-307)||(7131505-7131576)
chr3 (232-307)||(11076456-11076530)
chr3 (233-307)||(41464716-41464791)
chr3 (255-306)||(50735881-50735932)
chr3 (255-306)||(50776923-50776974)
chr3 (233-307)||(35359769-35359842)
chr3 (233-307)||(43426620-43426693)
chr3 (233-307)||(52256755-52256828)
chr3 (257-306)||(48489432-48489481)
chr3 (231-307)||(3917816-3917891)
chr3 (231-307)||(10229007-10229082)
chr3 (231-307)||(15003678-15003753)
chr3 (231-307)||(23878996-23879071)
chr3 (231-307)||(34397730-34397805)
chr3 (231-307)||(48191144-48191219)
chr3 (235-307)||(49285562-49285633)
[»] chr7 (29 HSPs)
chr7 (231-307)||(8037594-8037670)
chr7 (231-307)||(2228083-2228158)
chr7 (231-300)||(6328183-6328252)
chr7 (234-307)||(12645300-12645373)
chr7 (234-306)||(22752838-22752909)
chr7 (239-307)||(39580551-39580619)
chr7 (231-307)||(45236980-45237055)
chr7 (231-307)||(46021433-46021509)
chr7 (241-307)||(43188590-43188657)
chr7 (231-307)||(5222578-5222651)
chr7 (253-307)||(37938066-37938122)
chr7 (231-307)||(8059895-8059971)
chr7 (231-287)||(16842070-16842126)
chr7 (231-307)||(35157087-35157162)
chr7 (231-307)||(45957336-45957412)
chr7 (233-307)||(5523845-5523918)
chr7 (233-307)||(10061019-10061092)
chr7 (233-307)||(17895686-17895759)
chr7 (234-307)||(41708546-41708617)
chr7 (231-307)||(2354798-2354875)
chr7 (234-307)||(7264458-7264530)
chr7 (231-307)||(31299998-31300075)
chr7 (275-307)||(12961826-12961858)
chr7 (231-283)||(32251362-32251413)
chr7 (231-307)||(36251700-36251776)
chr7 (255-307)||(44136129-44136181)
chr7 (231-307)||(44327690-44327765)
chr7 (235-307)||(45041736-45041807)
chr7 (231-307)||(46910910-46910986)
[»] chr6 (11 HSPs)
chr6 (231-307)||(31241994-31242068)
chr6 (233-307)||(2395560-2395633)
chr6 (231-307)||(2314600-2314677)
chr6 (231-306)||(13032086-13032161)
chr6 (233-306)||(30614918-30614988)
chr6 (233-307)||(5603450-5603523)
chr6 (233-307)||(9727547-9727620)
chr6 (256-306)||(31256881-31256931)
chr6 (231-307)||(8939676-8939751)
chr6 (231-307)||(12795022-12795097)
chr6 (231-307)||(31057882-31057957)
[»] scaffold0057 (1 HSPs)
scaffold0057 (233-307)||(64335-64408)
[»] scaffold0633 (1 HSPs)
scaffold0633 (231-307)||(3797-3873)
[»] scaffold0244 (1 HSPs)
scaffold0244 (231-307)||(7760-7835)
[»] scaffold0515 (1 HSPs)
scaffold0515 (234-307)||(2531-2603)
[»] scaffold0306 (1 HSPs)
scaffold0306 (234-307)||(2531-2603)
[»] scaffold0223 (1 HSPs)
scaffold0223 (231-307)||(22970-23046)


Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-137; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 15 - 294
Target Start/End: Original strand, 40379492 - 40379771
Alignment:
Q  15 gagatgaacgtttattaagacgcctctcttgttgcgatgtgatgattggtaagaagaaaataatagggtggtttgtgtttgcgttggcttggttggttgg 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40379492 gagatgaacgtttattaagacgcctctcttgttacgatgtgatgattggtaagaagaaaataatagggtggtttgtgtttgcgttggcttggttggttgg 40379591  T
Q  115 tttccactgtatttgtaaccgtaatgaatggaagaaagggtaaccgtttaatttgttttcgatcacattatttatttattgatgccacattccatatttt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  40379592 tttccactgtatttgtaaccgtaatgaatggaagaaagggtaaccgtttaatttgttttcgatcacattatttatttattgatgccacattccttttttt 40379691  T
Q  215 ttagtatgaatgataagtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgt 294  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | |||||||||||| |||||||    
T  40379692 ttagtatgaatgataagtcatgaccggggttcgactctcaatacctccactttatgtgtgtgagtttatgataactttgt 40379771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 326 - 443
Target Start/End: Original strand, 40379822 - 40379938
Alignment:
Q  326 ccgtcgagtctaaggcaagtatttttaccactacgaaatctttggaattgttctattttcaaaacttgtgcgacttttattaaaacttaataataataaa 425  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||    
T  40379822 ccgtcgagtctaaggcaagtatttttaccactacgaaaactttggaattgttctattttcaaaactagtgcgacttttattaaaaattaataataa-aaa 40379920  T
Q  426 aatctaaaaatcaactca 443  Q
    |||||| |||||||||||    
T  40379921 aatctataaatcaactca 40379938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 38944448 - 38944384
Alignment:
Q  242 ggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  38944448 ggttcgaaccccaatacctccactttatgtatgtgagtttatgatggttttgtcatctcgtctat 38944384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 46343379 - 46343455
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| || | |||||||| |||| || | |||||||||||||||||||||||||| ||||||    
T  46343379 gtcatgaccggggttcgaaccctagtacctccattttacgtgtgtgagtttatgatgactttgtcatctcttctatc 46343455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 28758427 - 28758503
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||| ||||||| |||| |||||||||||| ||| | ||||||||| |||||||||  ||||| ||||||    
T  28758427 gtcatgaccggagttcgaaccccagtacctccactttgtgtgtgtgagtttataatgactttgcaatctcttctatc 28758503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 36752409 - 36752484
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| ||| |||||||||| |||| ||| ||||||||| ||| ||||||||| |||||||||    
T  36752409 gtcatgatcggggttcgaaccccgatacctccac-ttatatatgtgagtttataatggctttgtcatttcgtctatc 36752484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 435
Target Start/End: Original strand, 40390558 - 40390629
Alignment:
Q  366 tttggaattgttctattttcaaaacttgtgcgacttttattaaaacttaataat--aataaaaatctaaaaa 435  Q
    |||||| |||||||||||||||| || ||| |||||||||||||| ||||||||  || |||||||||||||    
T  40390558 tttggagttgttctattttcaaacctagtgtgacttttattaaaaattaataattaaaaaaaaatctaaaaa 40390629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 7413148 - 7413217
Alignment:
Q  237 accggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||  ||||||||||| || | | ||||||||| ||||||||||||| |||||||||    
T  7413148 accggggttcgaatcccggtacctccactt-atatgtgtgagtttataatgactttgtcatttcgtctatc 7413217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 7459228 - 7459297
Alignment:
Q  237 accggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||  ||||||||||| || | | ||||||||| ||||||||||||| |||||||||    
T  7459228 accggggttcgaatcccggtacctccactt-atatgtgtgagtttataatgactttgtcatttcgtctatc 7459297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 42550499 - 42550425
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||| ||||||||||| |||||||||||||| | | | ||||||| ||| ||||| ||| |||||||||    
T  42550499 catgaccgggattcgaatcccagtacctccactttatatgtgtaagtttataatggctttgccatttcgtctatc 42550425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 47462112 - 47462039
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  |||||||||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  47462112 catgaccggggttcgaaccccggtacctccacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 47462039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 54086063 - 54086136
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||| ||||||||||| |||||||||||||| |||| | ||||||||||| |||| |||||||| || ||||||    
T  54086063 catgatcggggttcgaaccccaatacctccac-ttatatgtatgagtttataatgattttgtcatttcatctatc 54086136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 39585384 - 39585455
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||| |||| |||| ||||||| |||||||| | |||||||||||| ||||||||||||| ||||||    
T  39585384 atgaccggggt-cgaaccccactacctcc-ctttatgtgtgtgagtttatgataactttgtcatctcttctatc 39585455  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 13389070 - 13389145
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  13389070 gtcatgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 13389145  T

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Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 33530269 - 33530345
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||| ||||| || | || |||||| ||||| ||| | |||||||||||| ||||| ||||||||||||||    
T  33530269 gtcatgaccgaggttcaaacctcagtacctctactttgtgtgtgtgagtttatgataactttttcatctcgtctatc 33530345  T

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Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 35615935 - 35616010
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||||||   ||||||||| |||||| | ||||||||| || |||||||||| || ||||||    
T  35615935 gtcatgaccggggttcgaatcctggtacctccac-ttatgtgtgtgagtttataataactttgtcatttcatctatc 35616010  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 37340158 - 37340110
Alignment:
Q  259 ctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||| ||| | |||||||||||||| ||||||||||||||||||    
T  37340158 ctccactttgtgtgtgtgagtttatgatgattttgtcatctcgtctatc 37340110  T

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Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 40597520 - 40597588
Alignment:
Q  239 cggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| |||||| | ||||| || | ||||| ||| |||||||||||| ||||||||||||||||||    
T  40597520 cggggtttgaatcctagtaccttcattctatgtgtataagtttatgatgattttgtcatctcgtctatc 40597588  T

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Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 49421742 - 49421818
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||  |||||||||| ||||||| ||||||||| | | | |||| ||| |||||||||| |||||||||||||    
T  49421742 gtcatgataggggttcgaaccccaatatctccactttctttgtgtgagcttacgatgactttgccatctcgtctatc 49421818  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 32057777 - 32057726
Alignment:
Q  256 tacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||| ||| | |||||||||||||  ||||||||||||||||||    
T  32057777 tacctccactttgtgtgtgtgagtttatgatggttttgtcatctcgtctatc 32057726  T

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Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 37759488 - 37759555
Alignment:
Q  240 ggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||| | | || |||||||||| ||| | ||||||||||||| |||||||||||| ||||||    
T  37759488 ggggttcgaacctcgattcctccactttgtgtgtgtgagtttatgatggctttgtcatctcttctatc 37759555  T

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Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 51281518 - 51281593
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||| ||||||| ||| |||||||||||| | ||| | ||| ||||| ||||||||||||| |||||||||    
T  51281518 catgaccggagttcgaaccccgatacctccacttgtgtgtgtgtgaatttataatgactttgtcatttcgtctatc 51281593  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 25586403 - 25586330
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||| ||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||||||| |||||||||    
T  25586403 catgatcggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgtcatttcgtctatc 25586330  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 28033244 - 28033317
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||| || |||||| || ||| | ||||||||| ||||||||| ||| |||||||||    
T  28033244 catgaccggggttcgaaccccagtatctccac-ttgtgtgtgtgagtttataatgactttgccatttcgtctatc 28033317  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 28983784 - 28983857
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||  ||  ||||||||||| |||| | ||||||||| ||||||||||||| | |||||||    
T  28983784 catgaccggggttcgaactccggtacctccactt-atgtgtgtgagtttataatgactttgtcattttgtctatc 28983857  T

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Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 31263577 - 31263504
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  31263577 catgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 31263504  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 31375165 - 31375238
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  |||||||||||  ||| | | ||||||| ||||||||||||| |||||||||    
T  31375165 catgaccggggttcgaaccccggtacctccacttg-tgtgtgtaagtttataatgactttgtcatttcgtctatc 31375238  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 37050753 - 37050826
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||| ||| |||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  37050753 catgaccggggttcgaaccccgatagctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 37050826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 42412064 - 42411991
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  42412064 catgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 42411991  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 24870650 - 24870723
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| |||||||| | |  ||||||||||||| || | ||||||||||||| ||||| |||||||| ||||    
T  24870650 atgaccgaggttcgaacctcggtacctccactttacgtgtgtgagtttatgatggctttgccatctcgtttatc 24870723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 579320 - 579245
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  579320 gtcatgatcggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 579245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 5880362 - 5880326
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttat 269  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  5880362 catgaccggggttcgaaccccgatacctccactttat 5880326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 16477015 - 16476940
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  16477015 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 16476940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 24712138 - 24712213
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  24712138 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 24712213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 34684252 - 34684327
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  34684252 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 34684327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 35338251 - 35338315
Alignment:
Q  242 ggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    |||||||| ||||| || |||||||| ||| | ||||||||||||||||||| ||| | ||||||    
T  35338251 ggttcgaaccccaacacatccactttgtgtgtctgagtttatgatgactttgccattttgtctat 35338315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 46107443 - 46107519
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| || | |||||| ||| ||||||||||||||||| | ||| |||||||||| |||| || ||| ||||||    
T  46107443 gtcatgatcgagattcgaaccccgatacctccactttatgtgtgtgaatttatgatgaatttgccaactcttctatc 46107519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 51579022 - 51578970
Alignment:
Q  255 atacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||| ||| ||||||||||||| ||||| ||| || ||||||    
T  51579022 atacctccactttatctatgtgagtttatgatggctttgccatgtcttctatc 51578970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 22132 - 22208
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  22132 gtcatgatcggggttcgaaccccgatacctccactttgtgtgtgtgagtttatgatgactttgtcatctcgtctatc 22208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 6525892 - 6525963
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtcta 305  Q
    |||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||||||||||| ||||    
T  6525892 atgatcggggttcgaaccccaatacctccactttgtgtgtgtgagtttatgatgactttgtcatctcttcta 6525963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 41215313 - 41215241
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtc 303  Q
    ||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||   ||||||||||||||    
T  41215313 gtcatgatcggggtttgaaccccgatacctccactttatgtatatgagtttatgatagttttgtcatctcgtc 41215241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 1271150 - 1271223
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| |||||||||||||||||||||| ||||| | | ||||||||||||   ||||||||||||||||||    
T  1271150 atgaccgaggttcgaatcccaatacctccattttatatgtgtgagtttatgattgttttgtcatctcgtctatc 1271223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 19867359 - 19867284
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||| ||||| ||| |||||| | ||||||||| ||||||||||||| ||| |||||    
T  19867359 gtcatgaccggggttcgaaccccagtaccttcac-ttatgtgtgtgagtttataatgactttgtcatttcgcctatc 19867284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 35619220 - 35619144
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||| |||||||| ||| |||||||||| | ||| ||||||||||||||||||||  |||||||| ||||    
T  35619220 gtcatgatcggagttcgaattccagtacctccactctgtgtgtatgagtttatgatgactttaccatctcgtttatc 35619144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 5203603 - 5203678
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||| |||||||||||| | ||| | ||||||||| ||||||||||||| | |||||||    
T  5203603 catgaccggggttcgaaccccgatacctccacttgtgtgtgtgtgagtttataatgactttgtcattttgtctatc 5203678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 9054047 - 9053974
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||||||| |||||||||    
T  9054047 catgaccggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 9053974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 11968828 - 11968901
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||| ||||||||| || ||| ||||||||||| ||| ||||| ||| |||||||||    
T  11968828 catgaccggggttcgaaccccagtacctccac-ttgtgtgtatgagtttataatggctttgccatttcgtctatc 11968901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 24051455 - 24051528
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||   |||||||||||  ||||| ||||||||| ||||||||||||| |||||||||    
T  24051455 catgaccggggttcgaaccctggtacctccacttg-tgtatgtgagtttataatgactttgtcatttcgtctatc 24051528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 4874320 - 4874248
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||| ||||||||||| ||| ||||||||| ||||||||| ||||||||| ||| ||||| ||| |||||||||    
T  4874320 atgatcggggttcgaaccccgatacctcca-tttatgtatgtgagtttataatggctttgccatttcgtctatc 4874248  T

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Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 26526563 - 26526632
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctc 300  Q
    |||||||||| ||||||||  ||  |||||||||||||||| | |||||||||||||| |||| ||||||    
T  26526563 gtcatgaccgaggttcgaactccggtacctccactttatgtgtgtgagtttatgatgaatttgccatctc 26526632  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 4430019 - 4429944
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||| || ||| |||||||||| |||||| | ||||||||| || ||||| |||| |||||||||    
T  4430019 gtcatgaccggggttcaaaccccgatacctccac-ttatgtgtgtgagtttataataactttatcatttcgtctatc 4429944  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 10084007 - 10083931
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||  ||  || ||||||||| ||| | | ||||||||||||||||| | |||||||||||    
T  10084007 gtcatgaccggggttcgaactccggtagctccactttgtgtgtgtaagtttatgatgactttgccctctcgtctatc 10083931  T

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Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 20695561 - 20695486
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  20695561 gtcatgaccggggttcgaacccctatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 20695486  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 14126954 - 14127028
Alignment:
Q  232 tcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||||||  ||||||||| || ||| |  |||||||| ||| ||||||||| |||||||||    
T  14126954 tcatgaccggggttcgaatcccggtacctccac-ttgtgtgtgcgagtttataatggctttgtcatttcgtctatc 14127028  T

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Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 27004041 - 27003966
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||| |||||||||||||||   |||||||||| | ||| | ||||||||| ||||||||||||| |||||||||    
T  27004041 catgatcggggttcgaatcccggcacctccacttatgtgtgtgtgagtttataatgactttgtcatttcgtctatc 27003966  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 1833395 - 1833322
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  1833395 catgaccggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 1833322  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 23311249 - 23311176
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  23311249 catgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 23311176  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 34856633 - 34856706
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  34856633 catgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 34856706  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 36246070 - 36245997
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||||||||| ||| |||||||||    
T  36246070 catgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatgactttgacatttcgtctatc 36245997  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 36259847 - 36259908
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttg 293  Q
    |||||||||||||||||||||||  ||||||||| |||||| | ||||||||| ||| |||||    
T  36259847 gtcatgaccggggttcgaatcccggtacctccac-ttatgtgtgtgagtttataatggctttg 36259908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 40318861 - 40318788
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  40318861 catgaccggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 40318788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 40596008 - 40596081
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||| |||||||||| |||  |||||||||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  40596008 catgactggggttcgaaccccggtacctccacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 40596081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 13952360 - 13952287
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||| || |||| |||||| ||||| ||||| | | ||||||||  |||||||||||||||||||    
T  13952360 atgaccgaggttcaaaacccagtacctctactttgtgtatgtaaatttatgatagctttgtcatctcgtctatc 13952287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 671137 - 671062
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| ||| ||||||||||  | ||| | ||||||||| ||||||||| ||| |||||||||    
T  671137 gtcatgatcggggttcgaaccccgatacctccac-gtgtgtgtgtgagtttataatgactttgccatttcgtctatc 671062  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 4165009 - 4165084
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  4165009 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 4165084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 5548964 - 5548916
Alignment:
Q  255 atacctccactttatgtatatgag-tttatgatgactttgtcatctcgt 302  Q
    ||||||||||||||||||| |||| ||| |||||||||||| |||||||    
T  5548964 atacctccactttatgtatgtgagttttttgatgactttgttatctcgt 5548916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 10393576 - 10393505
Alignment:
Q  235 tgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||||||| |||||||||    
T  10393576 tgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 10393505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 11408435 - 11408499
Alignment:
Q  243 gttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||| ||||| |||||| ||| | |||||||||||||  |||| | |||||||||||    
T  11408435 gttcgaatcccagtaccttcactttgtgtgtgtgagtttatgatggttttgccttctcgtctatc 11408499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 26802384 - 26802459
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  26802384 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 26802459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 26809934 - 26810009
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  26809934 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 26810009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 26824961 - 26825036
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  26824961 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 26825036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 307
Target Start/End: Original strand, 27227131 - 27227209
Alignment:
Q  229 aagtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||| ||||||||||| |||  || ||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  27227131 aagtcatgatcggggttcgaacccctgtaactccactttatgtgtatgagtttaggatgactttgccatctcgtctatc 27227209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 11081036 - 11080963
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||| || ||| ||||||||||||||||| ||||||| |||||||  ||||||||||||||||||    
T  11081036 atgaccggggttcaaaccccgatacctccactttatgtgtatgagtatatgatggttttgtcatctcgtctatc 11080963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 236620 - 236694
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||| |||||||||| |  |||||||||||||||||||||||| |||||||    
T  236620 gtcatgaccggggttcgaaccccggtaccttcactttatgtgt--gagtttatgatgactttgtcatcttgtctatc 236694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 35068924 - 35069000
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| || ||||||||| |||||||||||||||| ||| | ||||||||||| | ||||| |||||||||||||    
T  35068924 gtcatgatcgaggttcgaattccaatacctccactttgtgtgtgtgagtttatgacggctttgccatctcgtctatc 35069000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 7204585 - 7204510
Alignment:
Q  232 tcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| || ||||| ||| || ||||||    
T  7204585 tcatgaccggggttcgaaccccgatacctccactttgtgtatgtgagtttatggtggctttgccatgtcttctatc 7204510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 8793253 - 8793192
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgacttt 292  Q
    ||||||||||||||||||| |||  |||||||||||| ||| | ||||||||||||||||||    
T  8793253 gtcatgaccggggttcgaaccccggtacctccactttgtgtgtgtgagtttatgatgacttt 8793192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 44836196 - 44836120
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| |||  || ||||||||||| | | ||||||||||||| |||||||||||| ||||||    
T  44836196 gtcatgatcggggttcgaaccccggtatctccactttatatgtgtgagtttatgatggctttgtcatctcatctatc 44836120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 2208973 - 2208900
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||| | | |||||||||| ||||||||||||   |||| ||||||||| ||||||||||||| |||||||||    
T  2208973 gtcatgactgagattcgaatcccgatacctccactt---gtatgtgagtttataatgactttgtcatttcgtctatc 2208900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 8194038 - 8193965
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||||||||| ||| |||||||||    
T  8194038 catgaccggggttcgaacccctgtacctccac-ttatgtgtgtgagtttataatgactttgccatttcgtctatc 8193965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 15331138 - 15331065
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||| |||||||| |||  |||||||||||  ||||| ||||||||| ||||||||||||| |||||||||    
T  15331138 catgaccgaggttcgaaccccggtacctccacttg-tgtatgtgagtttataatgactttgtcatttcgtctatc 15331065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 42631061 - 42630988
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||| ||||||||||| ||| ||||||||||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  42631061 catgatcggggttcgaaccccgatacctccacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 42630988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 47429668 - 47429595
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||| |||||||||||||||  ||||||||| |||||| | ||||||||| ||| ||||||||| |||||||||    
T  47429668 catgatcggggttcgaatcccggtacctccac-ttatgtgtgtgagtttataatggctttgtcatttcgtctatc 47429595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 49948293 - 49948366
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||| |||||| |||| |||||||||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  49948293 catgaccgggattcgaaccccagtacctccacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 49948366  T

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Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 48302336 - 48302411
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttat--gatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||||| ||||||||| |||||| | |||||||||   ||| ||||||||| |||||||||    
T  48302336 catgaccggggttcgaatcccagtacctccac-ttatgtgtgtgagtttataatatggctttgtcatttcgtctatc 48302411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 307
Target Start/End: Complemental strand, 16867434 - 16867402
Alignment:
Q  275 tgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||||||||||||||||    
T  16867434 tgagtttatgatgactttgtcatctcgtctatc 16867402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 27113715 - 27113755
Alignment:
Q  257 acctccactttatgtatatgagtttatgatgactttgtcat 297  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  27113715 acctccactttgtttatatgagtttatgatgactttgtcat 27113755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 29511158 - 29511209
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttat 283  Q
    ||||||||||||||||||| ||| ||||||||| ||||||| |||||||||||    
T  29511158 gtcatgaccggggttcgaaccccgatacctcca-tttatgtgtatgagtttat 29511209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 37186895 - 37186819
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||| |||||||||  |   |||||||||||| ||| | ||||||||||||| |||||||||||| ||||||    
T  37186895 gtcatgaccagggttcgaactctggtacctccactttgtgtgtttgagtttatgatggctttgtcatctcttctatc 37186819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 41651123 - 41651199
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| |||||||||||||||  ||||| || ||||||| | ||||||||| |||  |||||||| |||||||||    
T  41651123 gtcatgatcggggttcgaatcccggtaccttcattttatgtgtgtgagtttataatggttttgtcatttcgtctatc 41651199  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 5790108 - 5790143
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactt 266  Q
    ||||||||||||||||||||||| ||||||||||||    
T  5790108 gtcatgaccggggttcgaatcccgatacctccactt 5790143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 26856859 - 26856917
Alignment:
Q  248 aatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||| |||| ||||||||| || |||||||||| |||||||||    
T  26856859 aatcccaatacctccac-ttaagtatgtgagtttataattactttgtcatttcgtctatc 26856917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 37315106 - 37315056
Alignment:
Q  257 acctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||| ||| | ||||||| || ||||||||||||||||||||||    
T  37315106 acctccactttgtgtgtgtgagtttgtgttgactttgtcatctcgtctatc 37315056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 39606457 - 39606530
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  39606457 catgaccggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 39606530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 40958650 - 40958577
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  40958650 catgaccggggttcgaatcccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 40958577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 2112797 - 2112872
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| ||   ||||||||| || ||| | ||||||||| ||| ||||||||| |||||||||    
T  2112797 gtcatgaccggggttcgaacccatgtacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 2112872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 5598351 - 5598426
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||| ||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||||||| |||||||||    
T  5598351 gtcatgaccggagttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 5598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 8050535 - 8050606
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||||||| ||| ||  |||||| |||| |||||||||||||||| || |||||||||| || |||||    
T  8050535 atgaccggggttcaaattccggtacctctactt-atgtatatgagtttataataactttgtcatttcatctat 8050606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 12176546 - 12176622
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||  ||||||| ||||||  |||||||||||||||| | |||  |||||||| ||||| |||||| ||||||    
T  12176546 gtcatgattggggttcaaatcccggtacctccactttatgtgtgtgaaattatgatggctttgccatctcatctatc 12176622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 12500605 - 12500538
Alignment:
Q  239 cggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||  || |||||||||| |||||| |||||||| || ||| ||||||||| |||||||||    
T  12500605 cggggttcgaactccgatacctccac-ttatgtgtatgagttcataatggctttgtcatttcgtctatc 12500538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 27078598 - 27078653
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatg 287  Q
    ||||||||||||||||||| |||  ||||||||| |||||| | |||||||||||||    
T  27078598 gtcatgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttatgatg 27078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 27856047 - 27856122
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| |||||||||||||||  ||| ||||| || ||| | ||||||||| |||||||| |||| |||||||||    
T  27856047 gtcatgatcggggttcgaatcccggtacttccac-ttgtgtgtgtgagtttataatgactttttcatttcgtctatc 27856122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 49632605 - 49632680
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||| |||||||| ||| |||||||||| || ||| | ||||||||| |||| ||| |||| |||||||||    
T  49632605 gtcatgaccgaggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatgattttatcatttcgtctatc 49632680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 50145210 - 50145135
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||| ||| |||||| ||| |||||| |||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  50145210 gtcatgactgggattcgaaccccgataccttcacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 50145135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 50248079 - 50248154
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||| |||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  50248079 gtcatgaccgaggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 50248154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 22382411 - 22382335
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| ||| | ||||||||||| ||||| |||||||||||||  ||||||||||||||||||    
T  22382411 gtcatgatcggggttcgaaccccgacacctccactttgtgtatgtgagtttatgatggttttgtcatctcgtctatc 22382335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 22914437 - 22914361
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| ||| | ||||||||||| ||||| |||||||||||||  ||||||||||||||||||    
T  22914437 gtcatgatcggggttcgaaccccgacacctccactttgtgtatgtgagtttatgatggttttgtcatctcgtctatc 22914361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 22999125 - 22999201
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| ||| | ||||||||||| ||| | |||||||||||||  ||||||||||||||||||    
T  22999125 gtcatgaccggggttcgaaccccgacacctccactttgtgtgtgtgagtttatgatggttttgtcatctcgtctatc 22999201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 39417500 - 39417568
Alignment:
Q  239 cggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||  || ||| ||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  39417500 cggggttcgaactccgatatctccactttatgtgtgtgagtttatgatgactttatcatctcgtctatc 39417568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 13491076 - 13491151
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||||||||||||| | ||||||||||||||| ||| | |||||||||| || ||||| |||||| |||||    
T  13491076 gtcatgaccggggttcgaacctcaatacctccactttgtgtgtgtgagtttatggtggctttgccatctcttctat 13491151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 18741451 - 18741400
Alignment:
Q  256 tacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  18741451 tacctccactttgtgtgtgtgagtttatgatgactttgtcatctcgtctatc 18741400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 19954976 - 19954903
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||| ||| ||||||| ||| ||||||| ||||| ||| |  |||||||||||||||||||||||||||||||    
T  19954976 gtcatgatcggagttcgaaccccgatacctctactttgtgtgt--gagtttatgatgactttgtcatctcgtctat 19954903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 32517896 - 32517828
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatct 299  Q
    |||||||||| |||||||| |||  |||||||||||| ||| | ||||||||||||||||||| |||||    
T  32517896 gtcatgaccgaggttcgaaccccggtacctccactttgtgtgtgtgagtttatgatgactttgccatct 32517828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 9993228 - 9993295
Alignment:
Q  239 cggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||||| |||| |||||| ||||| || || |||||||| |||||||||||||| ||||||||    
T  9993228 cggggttcgaaccccagtacctcaactttgtgcatgtgagtttacgatgactttgtcatttcgtctat 9993295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 43461410 - 43461337
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  |||||||||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  43461410 catgaccggggttcgaaccccggtacctccacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 43461337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 5618445 - 5618520
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||| |||||||||| | |||||| ||||| |||   |||||||||||||||||||||||||||| ||||    
T  5618445 gtcatgatcggagttcgaatccga-tacctcgactttgtgtgcgtgagtttatgatgactttgtcatctcgtttatc 5618520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 33898281 - 33898351
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtc 303  Q
    |||||||||||||||||||||||  ||||||||| || ||| | ||||||||| ||||||||||||| |||||    
T  33898281 gtcatgaccggggttcgaatccc-gtacctccac-ttgtgtgtgtgagtttataatgactttgtcatttcgtc 33898351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 40710913 - 40710837
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  |||||||||||| ||| | || |||||||||| |||||  || |||||||||    
T  40710913 gtcatgaccggggttcgaaccccggtacctccactttgtgtttgtgtgtttatgatggctttgcaatttcgtctatc 40710837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 45049435 - 45049510
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||||||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  45049435 gtcatgaccggggttcgaatcccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 45049510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 41164725 - 41164651
Alignment:
Q  232 tcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||| |||| |||||| || |||||| | ||||||||| ||| ||||||||| || ||||||    
T  41164725 tcatgaccggggttcgaaccccagtacctctac-ttatgtgtgtgagtttataatggctttgtcatttcatctatc 41164651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 17052607 - 17052685
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatcca 309  Q
    |||||||||||||||| ||  ||  |||||||||||| ||| | ||| ||||||||| ||||| |||||| ||||||||    
T  17052607 gtcatgaccggggttcaaactccggtacctccactttgtgtgtgtgaatttatgatggctttgccatctcttctatcca 17052685  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 637041 - 637090
Alignment:
Q  258 cctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||| ||| | |||||||||||||| |||| |||||||||||||    
T  637041 cctccactttgtgtgtgtgagtttatgatgattttgccatctcgtctatc 637090  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 8293622 - 8293558
Alignment:
Q  242 ggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||| |||||||||| |||||| | ||| ||||| ||| ||||||||| |||||||||    
T  8293622 ggttcgaatcccgatacctccac-ttatgtgtgtgaatttataatggctttgtcatttcgtctatc 8293558  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 816396 - 816472
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||  |||||||| |||  ||| |||||||| ||| | |||||||||||||  |||| |||||||||||||    
T  816396 gtcatgaccatggttcgaaccccggtacatccactttgtgtgtgtgagtttatgatggttttgccatctcgtctatc 816472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 13268053 - 13267978
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  13268053 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 13267978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 15897264 - 15897339
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  15897264 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatgcctttgccatttcgtctatc 15897339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 15920692 - 15920617
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| ||   ||||||||| || ||| ||||||||||| ||| ||||| ||| |||||||||    
T  15920692 gtcatgaccggggttcgaacccaggtacctccac-ttgtgtgtatgagtttataatggctttgccatttcgtctatc 15920617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 18055909 - 18055984
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| | |  |||||||| ||| ||| | ||||||||| ||||||||||||| |||||||||    
T  18055909 gtcatgatcggggttcgaaccgcgttacctcca-tttgtgtgtgtgagtttataatgactttgtcatttcgtctatc 18055984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 23497586 - 23497515
Alignment:
Q  235 tgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||||||| |||||||||    
T  23497586 tgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 23497515  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 23957102 - 23957177
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| |||  ||||||||| |||||| | ||||||| | ||| ||||||||| |||||||||    
T  23957102 gtcatgatcggggttcgaaccccggtacctccac-ttatgtgtgtgagtttttaatggctttgtcatttcgtctatc 23957177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 31671214 - 31671290
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||| |||||| |||||| ||| ||  | ||||||||| | | ||||||||||||||||||| | |||||||||||    
T  31671214 gtcataaccgggattcgaaccccgattaccccactttatatgtgtgagtttatgatgactttgccgtctcgtctatc 31671290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 36685481 - 36685406
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| ||  |||||||||| || ||| | ||||||||| || |||||||||| |||||||||    
T  36685481 gtcatgatcggggttcgaaccctgatacctccac-ttgtgtgtgtgagtttataataactttgtcatttcgtctatc 36685406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 37103373 - 37103441
Alignment:
Q  232 tcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctc 300  Q
    |||||||||||||| ||| ||| ||||||||  ||| ||| | ||| ||||||||||||||| ||||||    
T  37103373 tcatgaccggggtttgaaccccgatacctccgttttgtgtgtgtgaatttatgatgactttgccatctc 37103441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 40812067 - 40812142
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||| ||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  40812067 gtcatgaccggggttcgaaccccggtaccttcac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 40812142  T

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Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 15589332 - 15589258
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||  |||||| ||| ||||||||||||||||| |  ||||||||||||| ||||||||||||||||||    
T  15589332 gtcatgaccggaattcgaacccctatacctccactttatgtgt--gagtttatgatgaatttgtcatctcgtctatc 15589258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 32778548 - 32778624
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||| |||  || ||||||||||||| ||| | || |||||||||| |||||||||||||||||||    
T  32778548 gtcatgatcggggtttgaactccgatacctccactttgtgtgtgtgggtttatgatggctttgtcatctcgtctatc 32778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 33128243 - 33128167
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| |||  |||||||||||| ||||| ||||||||| |||  ||||||||||| ||||||    
T  33128243 gtcatgatcggggttcgaaccccggtacctccactttgtgtatgtgagtttattatgcatttgtcatctcatctatc 33128167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 40418178 - 40418234
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatg 287  Q
    ||||||||||| ||||||| ||| ||||||||||||||||| | |||||||||||||    
T  40418178 gtcatgaccggagttcgaaccccgatacctccactttatgtgtgtgagtttatgatg 40418234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 5700724 - 5700650
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||| |||| ||||||||||| | ||| | ||||||||| ||||||||| ||| |||||||||    
T  5700724 atgaccggggttcgaaccccagtacctccacttatgtgtgtgtgagtttataatgactttgccatttcgtctatc 5700650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 10096664 - 10096737
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||| |||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  10096664 catgaccggggttcgaaccccgatacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 10096737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 19649574 - 19649501
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||||||| |||||||||    
T  19649574 catgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgtcatttcgtctatc 19649501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 20662574 - 20662647
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||| ||  |||||||||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  20662574 catgaccggggttcgaatgccggtacctccacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 20662647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 37817428 - 37817501
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||||||| |||||||||    
T  37817428 catgaccggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 37817501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 11109935 - 11109867
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatct 299  Q
    |||||||| |||||||||| |||  || ||||||||||||| | | |||||||||||| ||||||||||    
T  11109935 gtcatgactggggttcgaaccccggtatctccactttatgtgtgttagtttatgatgattttgtcatct 11109867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 24197882 - 24197830
Alignment:
Q  255 atacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| | |||||||||||||  ||||||||||| ||||||    
T  24197882 atacctccactttatgtgtgtgagtttatgatggttttgtcatctcttctatc 24197830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 24242661 - 24242586
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||||| | ||| | | |||||| |||||||||||||| |||||||||    
T  24242661 catgaccggggttcgaaccccggtacctccacttgtgtgtgtgtcagtttacgatgactttgtcatttcgtctatc 24242586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 32922950 - 32922873
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactt---tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||| |||||||||||   | ||| | ||||||||| ||| ||||||||| |||||||||    
T  32922950 catgaccggggttcgaaccccagtacctccacttgtgtgtgtgtgtgagtttataatggctttgtcatttcgtctatc 32922873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 24732378 - 24732304
Alignment:
Q  232 tcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||| |||||||| ||  | | |||||| |||| | | ||||||||||||||||||| ||||||||||||    
T  24732378 tcatgaccgaggttcgaaccctgacatctccaccttatttgtgtgagtttatgatgactttgccatctcgtctat 24732304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 35810289 - 35810362
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||| |||  ||  |||||||||||| ||| ||| ||||||| ||||||||||||| |||||||||    
T  35810289 catgaccggggtttgaactccggtacctccacttt-tgtgtataagtttataatgactttgtcatttcgtctatc 35810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 37295178 - 37295251
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||||||| |||||||||    
T  37295178 catgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 37295251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 10926161 - 10926089
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||| ||||||||||| |||||||| ||||||| | ||| ||||| ||| |||| |||| |||||||||    
T  10926161 atgaccgggattcgaatcccagtacctcca-tttatgtgtgtgaatttataatggctttatcatttcgtctatc 10926089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 16395426 - 16395498
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||| |||  |||||||| ||| ||| | ||||||||| ||||||||| ||| |||||||||    
T  16395426 atgaccggggttcgaaccccggtacctcca-tttgtgtgtgtgagtttataatgactttgccatttcgtctatc 16395498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 4430813 - 4430738
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  4430813 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 4430738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 6317350 - 6317425
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  6317350 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 6317425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 6845059 - 6844988
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||||  ||||||| ||   ||||| ||||||||| ||| ||||| ||| |||||||||    
T  6845059 catgaccggggttcgaatcccggtacctccgct---tgtatgtgagtttataatggctttgccatttcgtctatc 6844988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 18641496 - 18641560
Alignment:
Q  243 gttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| || | |||||||||||||||| | | |||||||| | ||||||||||||| ||||||    
T  18641496 gttcgaaccctagtacctccactttatgtgtgttagtttatggtaactttgtcatctcatctatc 18641560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 20150271 - 20150346
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||  |||||| |||||||||||||| || ||| | ||||||||| ||  ||||||||| |||||||||    
T  20150271 gtcatgaccggaattcgaaccccaatacctccac-ttgtgtgtgtgagtttataatagctttgtcatttcgtctatc 20150346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 27817527 - 27817452
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  27817527 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 27817452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 36586534 - 36586607
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||||| ||||  | ||||||||| ||| ||||||||| |||||||||    
T  36586534 catgaccggggttcgaaccccggtacctccacttgtatg--tgtgagtttataatggctttgtcatttcgtctatc 36586607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 37820948 - 37820896
Alignment:
Q  255 atacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||| ||| | |||||||||||||  ||||||||||| ||||||    
T  37820948 atacctccactttgtgtgtgtgagtttatgatggttttgtcatctcttctatc 37820896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 38953558 - 38953483
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  38953558 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 38953483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 37278611 - 37278538
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||| |||||||| ||||| | |||||||||||| | | | |||||||||||||||||||||||||||||||||    
T  37278611 atgatcggggttcaaatcctagtacctccactttgtatgtgtgagtttatgatgactttgtcatctcgtctatc 37278538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 38417803 - 38417724
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatccac 310  Q
    ||||||||| | ||||||| ||| ||||| | ||||||||| | ||||||||| |||| |||||||||||||||||||||    
T  38417803 gtcatgaccagagttcgaaccccgatacccctactttatgtgtgtgagtttataatgattttgtcatctcgtctatccac 38417724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 4659612 - 4659664
Alignment:
Q  255 atacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  4659612 atacctccactttatgtgtgtgagtttataatgactttttcatctcgtctatc 4659664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 27845193 - 27845117
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||  ||||||||||| |||||||||| ||||||||| | ||||||||| |||  ||| ||||||||||||||    
T  27845193 gtcatgattggggttcgaattccaatacctcaactttatgtgtgtgagtttataatggttttatcatctcgtctatc 27845117  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 54923536 - 54923612
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||  || |||| |||| ||| ||| | ||| |||||||||| ||||||||||||||||||    
T  54923536 gtcatgaccggggttcgaactccgatacttccattttgtgtgtgtgaatttatgatgattttgtcatctcgtctatc 54923612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 10662042 - 10662108
Alignment:
Q  239 cggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||||| ||| |||||||||||||| || | |||||||||||| ||||||||| |||||||||    
T  10662042 cggggttcgaa-cccgatacctccactttacgtgtgtgagtttatgataactttgtcaactcgtctat 10662108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 27157978 - 27158051
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||| ||||||||||| | ||||||||| | ||||||| |||||||||||||||  |||| |||||| ||||||    
T  27157978 atgatcggggttcgaacctcaatacctctattttatgtgtatgagtttatgatggttttgccatctcatctatc 27158051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 7552649 - 7552720
Alignment:
Q  235 tgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||| |||||||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  7552649 tgaccggggttcgaaccccaatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 7552720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 21129096 - 21129172
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| |||  |||||| ||||| ||| | ||||||||||||| ||||| ||||| |||||||    
T  21129096 gtcatgatcggggttcgaaccccggtacctctactttgtgtttgtgagtttatgatggctttgccatcttgtctatc 21129172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 39948619 - 39948651
Alignment:
Q  275 tgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||||||||||||||||    
T  39948619 tgagtttatgatgactttgtcatctcgtctatc 39948651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 307
Target Start/End: Complemental strand, 7131576 - 7131505
Alignment:
Q  236 gaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||   | ||||||||||||| ||| | ||||||||||||| ||||| |||||| ||||||    
T  7131576 gaccggggttcgaacttcgatacctccactttgtgtgtgtgagtttatgatggctttgccatctcttctatc 7131505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 11076456 - 11076530
Alignment:
Q  232 tcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  11076456 tcatgaccggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 11076530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 41464716 - 41464791
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||| ||||||||||| | ||| | ||||||||| ||| ||||| ||| |||||||||    
T  41464716 catgaccggggttcgaaccccagtacctccacttgtgtgtgtgtgagtttataatggctttgccatttcgtctatc 41464791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 50735881 - 50735932
Alignment:
Q  255 atacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||| ||||||| | | |||||| |||||||||||||||||||||||    
T  50735881 atacctccattttatgtgtgtaagtttacgatgactttgtcatctcgtctat 50735932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 50776974 - 50776923
Alignment:
Q  255 atacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||| ||||||| | | |||||| |||||||||||||||||||||||    
T  50776974 atacctccattttatgtgtgtaagtttacgatgactttgtcatctcgtctat 50776923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 35359769 - 35359842
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||| |||  |||||||||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  35359769 catgaccagggttcgaaccccggtacctccacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 35359842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 43426620 - 43426693
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||| ||||||| |||  ||||||||||| |||| ||||||||||| ||| ||||| ||| |||||||||    
T  43426620 catgaccggagttcgaaccccggtacctccactt-atgtgtatgagtttataatggctttgccatttcgtctatc 43426693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 52256828 - 52256755
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||||||||| ||| |||||||||    
T  52256828 catgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatgactttgccatttcgtctatc 52256755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 48489481 - 48489432
Alignment:
Q  257 acctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||| ||||| | ||||||||||||||||||||||| || |||||    
T  48489481 acctccactctatgtgtgtgagtttatgatgactttgtcatttcttctat 48489432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 3917816 - 3917891
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  3917816 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 3917891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 10229007 - 10229082
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  10229007 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 10229082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 15003678 - 15003753
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  |||||||||  ||||| | ||||||||| ||| ||||| ||| |||||||||    
T  15003678 gtcatgaccggggttcgaaccccggtacctccac-ctatgtgtgtgagtttataatggctttgccatttcgtctatc 15003753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 23878996 - 23879071
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||| || ||||||| ||| |||||||||| |||||| | ||||||||  ||||| ||||||| |||||||||    
T  23878996 gtcatgactggagttcgaaccccgatacctccac-ttatgtgtgtgagtttacaatgacgttgtcatttcgtctatc 23879071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 34397730 - 34397805
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||| ||||||||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  34397730 gtcataaccggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 34397805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 48191144 - 48191219
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||  ||| ||||||||| || ||| | ||||||||| |||  |||||||| |||||||||    
T  48191144 gtcatgaccggggttcgaactccagtacctccac-ttgtgtgtgtgagtttataatggttttgtcatttcgtctatc 48191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 49285562 - 49285633
Alignment:
Q  235 tgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||| ||| | || |||||| |||| |||| | ||||||||| ||||||||||||| |||||||||    
T  49285562 tgaccggggtttgaaactcagtacctctactt-atgtgtgtgagtttataatgactttgtcatttcgtctatc 49285633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 8037594 - 8037670
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||| |||||||  ||| |||||||| ||||||| |||||||||||||||| |||| |||||||||||||    
T  8037594 gtcatgatcggagttcgaactccagtacctccattttatgtgtatgagtttatgatgattttgccatctcgtctatc 8037670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 2228158 - 2228083
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||||||  ||||||||||| ||||  | ||||||||| ||||||||||||| |||||||||    
T  2228158 gtcatgaccggggttcgaatcccggtacctccacttgtatg--tgtgagtttataatgactttgtcatttcgtctatc 2228083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 6328252 - 6328183
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctc 300  Q
    ||||||||  ||||||||| ||| ||||||||||||||||| | |||||||||||||  |||||||||||    
T  6328252 gtcatgactagggttcgaaccccgatacctccactttatgtgtgtgagtttatgatggttttgtcatctc 6328183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 12645373 - 12645300
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| |||||||| |||  |||||||||||||||| | || ||||||||||  ||||||||||||||||||    
T  12645373 atgaccgaggttcgaacccctgtacctccactttatgtgtgtgggtttatgatggttttgtcatctcgtctatc 12645300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 22752909 - 22752838
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    |||| ||||||||||| |||| ||||||||||| |||| ||||||||||| ||||||||| ||| ||||||||    
T  22752909 atgatcggggttcgaaccccagtacctccactt-atgtgtatgagtttataatgactttgccatttcgtctat 22752838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 39580619 - 39580551
Alignment:
Q  239 cggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||| |||||||||||||||| | ||| |||||||||  |||| |||||| ||||||    
T  39580619 cggggttcgaatcccagtacctccactttatgtgtgtgattttatgatggttttgccatctcttctatc 39580551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 45236980 - 45237055
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| ||| |||||||||| || ||||| ||||||||| ||| ||||| ||| |||||||||    
T  45236980 gtcatgaccggggttcgaaccccgatacctccac-ttgtgtatgtgagtttataatggctttgccatttcgtctatc 45237055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 46021509 - 46021433
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  |||||||| ||| ||| | ||||||||||||| ||||| |||||| ||||||    
T  46021509 gtcatgaccggggttcgaaccccggtacctccattttgtgtgtgtgagtttatgatggctttgccatctcttctatc 46021433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 43188590 - 43188657
Alignment:
Q  241 gggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||| |||||||||||||||| | ||| | ||||||||| ||||||||||||| |||||||||    
T  43188590 gggttcgaaccccaatacctccacttgtgtgtgtgtgagtttataatgactttgtcatttcgtctatc 43188657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 5222651 - 5222578
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| |||| ||||||||||   ||||| ||||||||| ||||||||| ||| |||||||||    
T  5222651 gtcatgatcggggttcgaaccccagtacctccact---tgtatgtgagtttataatgactttgccatttcgtctatc 5222578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 37938122 - 37938066
Alignment:
Q  253 caatacctccactttatgtatatgag--tttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| | ||||  |||||||||||||||||||||||| ||||    
T  37938122 caatacctccactttatgtgtgtgagagtttatgatgactttgtcatctcgtttatc 37938066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 8059895 - 8059971
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| |||  |||||| ||||| | | | ||||||| | |||||||||||||||||||||||    
T  8059895 gtcatgatcggggttcgaaccccggtacctcaactttgtatgtgtgagtttgtcatgactttgtcatctcgtctatc 8059971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 287
Target Start/End: Complemental strand, 16842126 - 16842070
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatg 287  Q
    |||||||| | | |||||| ||| ||||||||||||||||| |||||||||||||||    
T  16842126 gtcatgactgagattcgaaccccgatacctccactttatgtgtatgagtttatgatg 16842070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 35157162 - 35157087
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  35157162 gtcatgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 35157087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 45957412 - 45957336
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| | ||||||||| |||  |||||||||||| ||| | | ||||||||| |||||||||||||| ||||||    
T  45957412 gtcatgatcagggttcgaaccccggtacctccactttgtgtgtgttagtttatgaagactttgtcatctcttctatc 45957336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 5523845 - 5523918
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||||  |||||||||| |||||  | |||| |||| ||| ||||||||| |||||||||    
T  5523845 catgaccggggttcgaatcctgatacctccac-ttatgcgtgtgagattataatggctttgtcatttcgtctatc 5523918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 10061092 - 10061019
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  10061092 catgaccggggttcgaatcccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 10061019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 17895686 - 17895759
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||||||| |||||||||    
T  17895686 catgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgtcatttcgtctatc 17895759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 41708617 - 41708546
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||| ||||||||||| ||| ||||||||||||  ||||| ||||||||||||| ||||  |||||| ||||||    
T  41708617 atgatcggggttcgaaccccgatacctccactt--tgtatgtgagtttatgatggctttaccatctcttctatc 41708546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 2354875 - 2354798
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||| ||||||| ||| |||||||||||| | ||| | ||||||||| ||| ||||| ||| |||||||||    
T  2354875 gtcatgaccggagttcgaaccccgatacctccacttgtgtgtgtgtgagtttataatggctttgccatttcgtctatc 2354798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 7264458 - 7264530
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| |||||||||| |  ||||||||| |||||| | ||||||||| ||||||||| ||| |||||||||    
T  7264458 atgaccgaggttcgaatctcggtacctccac-ttatgtgtgtgagtttataatgactttgccatttcgtctatc 7264530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 31300075 - 31299998
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| | |  ||||||||||| | ||| | ||||||||| || |||||||||| |||||||||    
T  31300075 gtcatgaccggggttcgaacctcggtacctccacttatgtgtgtgtgagtttataataactttgtcatttcgtctatc 31299998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 307
Target Start/End: Complemental strand, 12961858 - 12961826
Alignment:
Q  275 tgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||||||||||||| ||||||    
T  12961858 tgagtttatgatgactttgtcatctcttctatc 12961826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 32251413 - 32251362
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttat 283  Q
    ||||||||||||||||||| ||| |||||||||| |||||| | |||||||||    
T  32251413 gtcatgaccggggttcgaaccccgatacctccac-ttatgtgtgtgagtttat 32251362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 36251700 - 36251776
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||| ||| |||||||| |||  ||  |||||||||||| | |||||||||||||  |||| |||||||||||||    
T  36251700 gtcatggccgaggttcgaaccccggtatttccactttatgtgtgtgagtttatgatggttttgccatctcgtctatc 36251776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 44136181 - 44136129
Alignment:
Q  255 atacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||| ||| | |||||||| ||||||||||| || |||||||||    
T  44136181 atacctccactttgtgtgtgtgagtttaagatgactttgtaatttcgtctatc 44136129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 44327690 - 44327765
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||  |||||| |||||||||||||| || ||| | ||||||||| ||  ||||||||| |||||||||    
T  44327690 gtcatgaccggaattcgaaccccaatacctccac-ttgtgtgtgtgagtttataatagctttgtcatttcgtctatc 44327765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 45041807 - 45041736
Alignment:
Q  235 tgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||||||||| ||| |||||||||    
T  45041807 tgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatgactttgccatttcgtctatc 45041736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 46910986 - 46910910
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| ||||||||||| | |  |||||| ||||| ||| | ||||||||||||   ||||||||||||||||||    
T  46910986 gtcatgatcggggttcgaacctcggtacctcaactttgtgtgtctgagtttatgatagatttgtcatctcgtctatc 46910910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 31242068 - 31241994
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||||||| | ||||||||  | ||| | ||||||||||||||||||| ||| |||||||||    
T  31242068 gtcatgaccggggttcgaatcccgacacctccac--tgtgtgtgtgagtttatgatgactttgccatttcgtctatc 31241994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 2395633 - 2395560
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||||  ||| || || ||||||||| ||||||||| ||| ||||||||| |||||||||    
T  2395633 catgaccggggttcgaatcctgatatcttca-tttatgtatgtgagtttataatggctttgtcatttcgtctatc 2395560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 2314677 - 2314600
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactt-tatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||||| | ||| | ||||||||| ||||||||| ||| |||||||||    
T  2314677 gtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttataatgactttgccatttcgtctatc 2314600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 13032161 - 13032086
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||||| | | ||| ||||| ||||||||||||||| | ||| |||||||||| ||| |||| ||||||||    
T  13032161 gtcatgaccggagcttgaaccccaacacctccactttatgtgtgtgaatttatgatgattttatcatttcgtctat 13032086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 30614988 - 30614918
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    |||||| ||||||||||| || ||||||||||||   || | ||||||||| ||||||||||||| ||||||||    
T  30614988 catgactggggttcgaattccgatacctccactt---gtgtgtgagtttataatgactttgtcatttcgtctat 30614918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 5603523 - 5603450
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||| ||  |||||||||| || ||| | ||||||||| ||||||||| ||| |||||||||    
T  5603523 catgaccggggttcgaaccctgatacctccac-ttgtgtgtgtgagtttataatgactttgccatttcgtctatc 5603450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 9727547 - 9727620
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||| ||||||||||| |||  |||||||||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  9727547 catgatcggggttcgaacccctgtacctccacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 9727620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 31256931 - 31256881
Alignment:
Q  256 tacctccactttatgtatatgagtttatgatgactttgtcatctcgtctat 306  Q
    ||||||||| |||||| | ||||||||||| ||||||| ||||||||||||    
T  31256931 tacctccaccttatgtgtgtgagtttatgaagactttgccatctcgtctat 31256881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 8939676 - 8939751
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  8939676 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 8939751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 12795097 - 12795022
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| | |  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  12795097 gtcatgaccggggttcgaaccgcggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 12795022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 31057882 - 31057957
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| |||  ||||||||| || ||| | ||||||||| |||  |||||||| |||||||||    
T  31057882 gtcatgaccggggttcgaaccccggtacctccac-ttgtgtgtgtgagtttataatggttttgtcatttcgtctatc 31057957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 64335 - 64408
Alignment:
Q  233 catgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||| ||||||| |||| |||||||||||  ||| | ||||||||| ||||||||||||| |||||||||    
T  64335 catgaccggagttcgaaccccagtacctccacttg-tgtgtgtgagtttataatgactttgtcatttcgtctatc 64408  T

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Target: scaffold0633 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 3873 - 3797
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||| |||||||||||||||  ||||| || ||||||| | ||||||||| |||  |||||||| |||||||||    
T  3873 gtcatgatcggggttcgaatcccggtaccttcattttatgtgtgtgagtttataatggttttgtcatttcgtctatc 3797  T

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Target: scaffold0244 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 7835 - 7760
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    ||||||||||||||||||| ||| |||||||||| || ||| | ||||||||| ||| ||||| ||| |||||||||    
T  7835 gtcatgaccggggttcgaaccccgatacctccac-ttgtgtgtgtgagtttataatggctttgccatttcgtctatc 7760  T

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Target: scaffold0515 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 2531 - 2603
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  2531 atgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 2603  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 2531 - 2603
Alignment:
Q  234 atgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||||||||||| |||  ||||||||| |||||| | ||||||||| ||| ||||| ||| |||||||||    
T  2531 atgaccggggttcgaaccccggtacctccac-ttatgtgtgtgagtttataatggctttgccatttcgtctatc 2603  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 22970 - 23046
Alignment:
Q  231 gtcatgaccggggttcgaatcccaatacctccactttatgtatatgagtttatgatgactttgtcatctcgtctatc 307  Q
    |||||||| | || ||||| |||  |||||||||||| ||| | |||||||||||||  ||||||||| ||||||||    
T  22970 gtcatgactgaggatcgaaccccggtacctccactttgtgtgtttgagtttatgatggttttgtcatcccgtctatc 23046  T

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