View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10676_low_3 (Length: 285)
Name: NF10676_low_3
Description: NF10676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10676_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 17 - 274
Target Start/End: Complemental strand, 14789738 - 14789481
Alignment:
| Q |
17 |
tatagctgacttagggtattagattaaggaccagaaaacacttgtgattataatgcttaattgtcatttttattataaaataaagagtttaggaagctta |
116 |
Q |
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| T |
14789738 |
tatagctgacttagggtattagattaaggaccagaaaacacttgtgattataatggttaattgtcatttttattataaaataaagagtttaggaaggtta |
14789639 |
T |
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| Q |
117 |
atatagttggtaaagatgtttcttattttccatatagtatgagttcaaatgtcatgaccaatgtaatgatctaactgttctataatatgcaaatatagat |
216 |
Q |
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| T |
14789638 |
atatagttggtaaagatgtttcttattttccatatagtatgagttcaaatgtcatgaccaatgtaatgatctaactgttgtataatatgcaaatatagat |
14789539 |
T |
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| Q |
217 |
gtaaacatttgaatttacacggatatatagctaagaactctttactttgtcacttcat |
274 |
Q |
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| T |
14789538 |
gtaaacatttgaatttacatggatatatagctaagaactctttactttgtcacttcat |
14789481 |
T |
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