View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10678_low_10 (Length: 379)
Name: NF10678_low_10
Description: NF10678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10678_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 361
Target Start/End: Original strand, 26901389 - 26901749
Alignment:
| Q |
1 |
agcatgtgattataagaaaaagatttatactatatagaatcaaattccgtnnnnnnnttactattaaatcaaactaaacagtaacaaaattgagattacg |
100 |
Q |
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| T |
26901389 |
agcatgtgattataagaaaaagatttatactacataaaatcaaattccgtaaaaaaattactattaaatcaaactaaacagtaacaaaattgagattacg |
26901488 |
T |
|
| Q |
101 |
gtaacgttaaacaaagtttaccttaagatcaccggggagtttaccagccaaagcttccgcaaaatcagcaacagcatgattcagatacaacaccgttgag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26901489 |
gtaacgttaaacaaagtttaccttaagatcaccggggagtttaccagccaaagcttccgcaaaatcagcaacagcatgattcagatacaacaccgttgag |
26901588 |
T |
|
| Q |
201 |
tgctgtaattttttcgtttgatcaatgatcgctgcaaccacatcagggtgacagtgcccgcaacacaccgtagcaatccctccaaacgcatcaacgtacc |
300 |
Q |
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||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
26901589 |
tgctgtaattttttcgtttgatcaacgatcgctgaaaccacatcagggtgacagtgcccgcaacacaccgtagcaatccctccgaacgcatcaacgtacc |
26901688 |
T |
|
| Q |
301 |
ttctcccattttcatcgaacagatactgcttcttcccttccacgatgttcagctgcaccat |
361 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26901689 |
ttctcccattttcatcgaacagatactgcttcttcccttccacgatgttcagctgcaccat |
26901749 |
T |
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