View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10678_low_16 (Length: 327)
Name: NF10678_low_16
Description: NF10678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10678_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 36440300 - 36440075
Alignment:
| Q |
18 |
cttgccactcacttgacaccataacactgaaccaatcattggaagacaacgatgttttggtctccaaccctcgaggaacctttgcacttggtttcttcac |
117 |
Q |
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| T |
36440300 |
cttgccactcacttgacaccataacactgaaccaatcattggaagacaacgatgttttggtctccaaccctcgaggaacctttgcacttggtttcttcac |
36440201 |
T |
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| Q |
118 |
cctacagaaagattctaaaacacgataccttggtatatggtacaacaaaatttcagaacaaaccattgtttgggttgcaaacagagatactcctttgtac |
217 |
Q |
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| T |
36440200 |
cttacagaaagattctaaaacacgataccttggtatatggtacaacaaaatttcagaacaaaccattgtttgggttgcaaacagagatactcctttgtac |
36440101 |
T |
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| Q |
218 |
aacacttccggtgttgtctccatcag |
243 |
Q |
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|||||||||||||||||||||||||| |
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| T |
36440100 |
aacacttccggtgttgtctccatcag |
36440075 |
T |
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