View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10679_low_28 (Length: 211)
Name: NF10679_low_28
Description: NF10679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10679_low_28 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 38117026 - 38117153
Alignment:
| Q |
65 |
cttacacatgagataaaaaatttaaattgtttccctactttggcaatgatttcacaccgtgcacaattaaacttgttaagagtttgtatttgatgaaaca |
164 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38117026 |
cttacacatgagataaaaaaattaaattgtttccctactttgccaatgatttcacaccgtgcacaattaaacttgttaagagtttgtatttgatgaaaca |
38117125 |
T |
|
| Q |
165 |
aagtctaaaaataaatttacaagtgtga |
192 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
38117126 |
aagtctaaaaataaatttacaagtgtga |
38117153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University