View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10679_low_29 (Length: 210)
Name: NF10679_low_29
Description: NF10679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10679_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 13769476 - 13769297
Alignment:
| Q |
18 |
acctacatgactattttgctaatatacttaacctatacacattccatttccattcctctaggatttgacaaatcttttttctattgcaacttattatcaa |
117 |
Q |
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| T |
13769476 |
acctacatgactattttgctaatatacttaacctatacacattccatttccattcctctaggatttgacaaatcttttttctattgcaacttattatcaa |
13769377 |
T |
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| Q |
118 |
gctccacaaatggtgaccttatatcagataaactttcaggtttatttaaccctgtaggagaatgtactatcatgttctct |
197 |
Q |
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| T |
13769376 |
gctccacaaatggtgaccttatatcagataaactttcaggtttatttaaccctgtaggagaatgtactatcatgttctct |
13769297 |
T |
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