View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10680_low_9 (Length: 239)
Name: NF10680_low_9
Description: NF10680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10680_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 31363111 - 31363292
Alignment:
| Q |
1 |
ttacggatgagttagacacgatataaaaacataacaaatgtgattgtgtattcttaattcattttcagatgtgagcaacaacagttttagaaagttaaat |
100 |
Q |
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| T |
31363111 |
ttacggatgagttggacacgatataaaaacataacaaatgtgattgtgtattcttaattcattttaagatgagagcaacaacagttttagaaagttaaat |
31363210 |
T |
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| Q |
101 |
gatgaatcacgcagaaattgatgtcacaagtatatgggccagtgatgtttaaaggatgaaaatgacataggaaagacttaga |
182 |
Q |
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| T |
31363211 |
gatgaatcacgcagaaattgatgtcacaagtatatgggccagtgatgtttaaaggatgaaaatgacataggaaagacttaga |
31363292 |
T |
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