View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10681_low_10 (Length: 269)
Name: NF10681_low_10
Description: NF10681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10681_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 7 - 258
Target Start/End: Original strand, 45871522 - 45871776
Alignment:
| Q |
7 |
gtttgtaccactttatagtatgatattggtataacttactaattagggaattctagacttgcaccaaaatcctaacgagaatgaggtaactaaggttcag |
106 |
Q |
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| T |
45871522 |
gtttgtaccactttatagtatgatattggtataacttactaattagggaattctagacttgtaccaaaatcctaacgagaatgaggtaactaaggttcag |
45871621 |
T |
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| Q |
107 |
caatctgtattaactcagggttggtaagttggtatctttctatcaataaatgatatttgtgagtgcatcaaaacctttaccaatgaaacagacaattatt |
206 |
Q |
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| T |
45871622 |
caatctgtattaactcagggttggtaagttggtatctttctatcaataaatgatatttgtgagtgcatcaaaacctttaccaatgaaacagacaattatt |
45871721 |
T |
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| Q |
207 |
acacaataagttctcgacgcattaacacaaatgac---agtaactgctttttctt |
258 |
Q |
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| T |
45871722 |
acacaataagttcttgacgcattaacacaaatgacagtagtaactgctttttctt |
45871776 |
T |
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