View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10681_low_11 (Length: 259)
Name: NF10681_low_11
Description: NF10681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10681_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 29122057 - 29122305
Alignment:
| Q |
1 |
accctgatgcagaagccatgaattaaattgaagatattgtatatatttattgtttctacaaggagatatgtctcaatttatatccatggctatttatact |
100 |
Q |
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| T |
29122057 |
accctgatgcagaagccatgaattaaattgaagatattgtatatatttgttgtttctacaaggagatatgtctcaatttatatgcatggctatttatact |
29122156 |
T |
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| Q |
101 |
ttgtacattatgtatgaattgggacccatgcaaaggtgcaagagtgggagaaagaacatttgcaatggccaatgagtatgagaatttctaagagggaact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
29122157 |
ttgtacattatgtatgaattgggacccatgcaaaggtgcaagagtgggagaaagaacatttgcaatggccaatgagtatgaaaatttctaagagggaact |
29122256 |
T |
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| Q |
201 |
attggtatcattcttttcttctttgtttcattgtgatgatatacctatg |
249 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||| ||||| |
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| T |
29122257 |
attggtatcattcttttcttctttgtttcattgtggtgatatatctatg |
29122305 |
T |
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