View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10681_low_6 (Length: 325)
Name: NF10681_low_6
Description: NF10681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10681_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 8 - 307
Target Start/End: Original strand, 36284964 - 36285272
Alignment:
| Q |
8 |
tagttgaagtgatgagttcatataatttttatatgatgatagtcgattaggcaacacagttaattgattagatgttagagaggtgcaagaagtaggctaa |
107 |
Q |
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| T |
36284964 |
tagttgaagtgatgagttcatataatttttatatgatgatagtcgattaggcaacacagttaattgattagatgttagagaggtgcaagaagtaggctaa |
36285063 |
T |
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| Q |
108 |
gatat--------aatcctagggaaattgtggaataaaaaatcttgagagttaagactaattgtgaatggcttggatgtgatgaataattgtgtaaactt |
199 |
Q |
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| T |
36285064 |
gatataatcatataatcctagggaaattgtggaataaaaaatcttgagagttaagactaattgtgaatggcttggatgtgatgaataattgtgtaaactt |
36285163 |
T |
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| Q |
200 |
aagacaatgaattggtatgttaagattaatttattctggtgatcattaaggttgatttattagggtgatttt-caaattagggaatacccttgagtgtgt |
298 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36285164 |
aagataatgaattggtatgttaagattaatttattctggtgatcattaaggttgatttattagggtgattttccaaattagggaatacccttgagtgtgt |
36285263 |
T |
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| Q |
299 |
tagtcgatt |
307 |
Q |
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| T |
36285264 |
tagtcgatt |
36285272 |
T |
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