View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10685_high_7 (Length: 224)
Name: NF10685_high_7
Description: NF10685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10685_high_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 15687416 - 15687653
Alignment:
| Q |
1 |
agatttaacatcatcatataaatagctctgaaacaagggtactcctaatttcatgttgtaatatattctaatggtgtacttgacaaccat---------- |
90 |
Q |
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| T |
15687416 |
agatttaacatcatcatataaatagctctgaaacaaaggtactcctaatttcatgttgtaatatattctaatggtgtacttgacaaccatggttgtcatt |
15687515 |
T |
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| Q |
91 |
----agtcgatattcaaattgtgaatctggaagatctattttatgaaacgtgaattgaatctattaatgtatacatgaccaatgaaatatgacactttaa |
186 |
Q |
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| T |
15687516 |
atcaagtcgatattcaaattgtgaatctggaagatctattttccgaaacgtgaattgaatctattaatgtatacatgaccaatgaaatatgacattttaa |
15687615 |
T |
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| Q |
187 |
agtaaaaacaaggggtttgcataaaagcataagcactt |
224 |
Q |
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||||||||||||||||||||||||||| |||||||||| |
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| T |
15687616 |
agtaaaaacaaggggtttgcataaaagaataagcactt |
15687653 |
T |
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