View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10685_low_3 (Length: 318)
Name: NF10685_low_3
Description: NF10685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10685_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 18 - 310
Target Start/End: Complemental strand, 9397281 - 9396989
Alignment:
| Q |
18 |
atttgctacttgaagaaatagttaacctgtaaataacttaattttcagctcattaattcaatgtatgaattcttccttctcagttctcgctagttaaaac |
117 |
Q |
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| T |
9397281 |
atttgctatttgaagaaatagttaacctgtaactaacttaattttcagctcattgattcaacgtatgagttcttccttctcagttctcgctagttaaaat |
9397182 |
T |
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| Q |
118 |
ggatctttaaggataaccatgtacacttcttcttaaatctcaccatgcaaaaattattattaacatgaacttgtggagatgctagttgttgatagaatct |
217 |
Q |
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|||||||||||||||||||| || |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9397181 |
ggatctttaaggataaccatttatacttcttcttgaagctcaccatgcaaaaattattattaacatgaacttgtggagatgctagttgttgatagaatct |
9397082 |
T |
|
| Q |
218 |
aaaatcatgatcattctgacattagttaacttagcgattgaggaaaatgtgtcataatagtataacctttctatttgattgtaaccctttgct |
310 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9397081 |
aaaatcatgatcattctgacattagttaacttcgcgattgaggaaaatgtgtcataatagtataacctttctatttgattgtaaccctttgct |
9396989 |
T |
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