View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10686_high_4 (Length: 346)
Name: NF10686_high_4
Description: NF10686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10686_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 50526070 - 50525744
Alignment:
| Q |
1 |
gtgagagaacaaaggaagaccaaaacagggccaaagatccacaacaacaatggaagtgctgaatagaagagtctgtttccaacagtgtttaaagtgaagc |
100 |
Q |
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| T |
50526070 |
gtgagagaacaaaggaagaccaaaacagggccaaagatccacaacaacaatggaagtgctgaatagaagagtctgtttccaacagtgtttaaagtgaagc |
50525971 |
T |
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| Q |
101 |
ctctctccaataactcactaacatatgatggggtcaccaaagacattgaatcctgtggggtgttaattagaatgttgacttggttgataaatctaatgga |
200 |
Q |
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| T |
50525970 |
ctctctccaataactcactaacatatgatggggtcaccaaagacattgaatcctgtggggtgttaattagaatgttgacttggttgataaatctaatgga |
50525871 |
T |
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| Q |
201 |
taatgagtgacagaagaaggaaaataagaagatagtgagaagagtcacatatttcagagcttccatgaactctccatgggctccataaactgagtcgttg |
300 |
Q |
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| T |
50525870 |
taatgagtgacagaagaaggaaaataagaagatagtgagaagagtcacatatttcagagcttccatgaactctccatgggctccataaactgagtcgttg |
50525771 |
T |
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| Q |
301 |
aggggcttcttgacactgtaggtactg |
327 |
Q |
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| T |
50525770 |
aggggcttcttgacactgtaggtactg |
50525744 |
T |
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