View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10686_low_10 (Length: 313)
Name: NF10686_low_10
Description: NF10686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10686_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 37259579 - 37259875
Alignment:
| Q |
1 |
aaattggattaattagtggaatcaattactattatggattataccttttttggtgcattcaaattaaagaaagaaatcatatcgtaaaaataataataat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37259579 |
aaattggattaattagtggaatcaattactattatggattatacctcttttggtgcattcaaattaaagaaagaaatcatatcgtaaaaataataataat |
37259678 |
T |
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| Q |
101 |
aagatatatgagccgtcccacgtaaataaaatatgaaaggccttgtgtgtg-----ttaataaagggtttgacgacaatataaaatttcaattgcattcc |
195 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37259679 |
aagatat--gagccgtcccacgtaaataaaatatgaaaggccttgtgtgtgttgtgttaataaagggtttgacgacaatataaaatttcaattgcattcc |
37259776 |
T |
|
| Q |
196 |
agaatagtgtaccaaaaaacataaatcatctttaactttggattacgttcggattctgaatagatatatatttttgtattttatatggaacgttattcc |
294 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37259777 |
agaatagtgtaccaaaaaacataaatcatctttaactttggattacgttcggattctgaatagatatatatttttgtattttatatggaacgttattcc |
37259875 |
T |
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