View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1068_low_13 (Length: 393)
Name: NF1068_low_13
Description: NF1068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1068_low_13 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 162 - 393
Target Start/End: Complemental strand, 7254288 - 7254057
Alignment:
| Q |
162 |
atgaagtaatcaattaataagtacttattgtcaataaataaaatttgaagtacctgtttgtaagaagaatctgaggccacaggacaaattggacatttcc |
261 |
Q |
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| T |
7254288 |
atgaagtaatcaattaataagtacttattgtcaataaataaaatttgaagtacctgtttgtaagaagaatctgaggccacaggacaaattggacatttcc |
7254189 |
T |
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| Q |
262 |
aatcttgaacagacagagtagccaatgttactgctaaaattgcatgaattgtagagacaatcctgttggagaaatcaaatgaacgttttggaaagatttt |
361 |
Q |
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| T |
7254188 |
aatcttgaacagacagagtagccaatgttactgctaaaattgcatgaattgtagagacaatcctgttggagaaatcaaatgaacgttttggaaagatttt |
7254089 |
T |
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| Q |
362 |
cctcattacaagaaaagttgttgtccatgaaa |
393 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
7254088 |
cctcattacaagaaaagttgttgtccatgaaa |
7254057 |
T |
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