View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10691_high_13 (Length: 230)

Name: NF10691_high_13
Description: NF10691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10691_high_13
NF10691_high_13
[»] chr1 (38 HSPs)
chr1 (9-218)||(8275950-8276159)
chr1 (47-218)||(38056671-38056842)
chr1 (47-156)||(28476733-28476842)
chr1 (47-131)||(50544841-50544925)
chr1 (46-138)||(24719509-24719600)
chr1 (47-138)||(12710829-12710920)
chr1 (136-210)||(4595933-4596007)
chr1 (48-134)||(22145666-22145752)
chr1 (47-138)||(24007224-24007315)
chr1 (47-111)||(17901793-17901857)
chr1 (47-211)||(8306494-8306659)
chr1 (47-124)||(6834152-6834229)
chr1 (47-138)||(39061283-39061373)
chr1 (47-111)||(34392757-34392821)
chr1 (47-108)||(635003-635064)
chr1 (47-111)||(35895088-35895152)
chr1 (47-111)||(45499531-45499595)
chr1 (47-138)||(21188033-21188123)
chr1 (138-177)||(44822110-44822149)
chr1 (139-190)||(51324415-51324466)
chr1 (138-184)||(7320683-7320729)
chr1 (138-177)||(7052011-7052050)
chr1 (47-86)||(7703136-7703175)
chr1 (48-171)||(19676641-19676763)
chr1 (47-138)||(20708058-20708148)
chr1 (96-138)||(40390112-40390155)
chr1 (90-128)||(14792604-14792642)
chr1 (48-102)||(20588636-20588690)
chr1 (48-102)||(20593174-20593228)
chr1 (90-128)||(21243799-21243837)
chr1 (90-138)||(18121565-18121614)
chr1 (138-171)||(20633723-20633756)
chr1 (90-138)||(38887128-38887177)
chr1 (47-100)||(42913049-42913102)
chr1 (47-111)||(12327742-12327806)
chr1 (48-100)||(21046049-21046101)
chr1 (142-198)||(42912952-42913008)
chr1 (47-111)||(51336468-51336532)
[»] chr4 (36 HSPs)
chr4 (47-218)||(9638892-9639063)
chr4 (47-156)||(14631079-14631188)
chr4 (47-138)||(16296900-16296991)
chr4 (47-156)||(25513795-25513904)
chr4 (54-154)||(35660902-35661002)
chr4 (46-156)||(26446151-26446261)
chr4 (48-211)||(33186792-33186955)
chr4 (48-138)||(12424290-12424383)
chr4 (46-138)||(2424385-2424477)
chr4 (47-114)||(15239815-15239882)
chr4 (37-108)||(13847193-13847264)
chr4 (62-126)||(15747787-15747851)
chr4 (65-126)||(17142996-17143057)
chr4 (47-138)||(14477594-14477684)
chr4 (47-138)||(18462986-18463076)
chr4 (47-111)||(9622478-9622542)
chr4 (47-111)||(10273372-10273436)
chr4 (47-111)||(55583185-55583249)
chr4 (90-138)||(12623278-12623327)
chr4 (90-138)||(19565959-19566008)
chr4 (47-100)||(37019670-37019723)
chr4 (90-138)||(45314124-45314173)
chr4 (90-137)||(26921550-26921598)
chr4 (47-100)||(15115222-15115275)
chr4 (138-171)||(16998455-16998488)
chr4 (29-66)||(19739772-19739809)
chr4 (138-171)||(25091583-25091616)
chr4 (29-66)||(27996825-27996862)
chr4 (90-123)||(46741177-46741210)
chr4 (138-171)||(53630563-53630596)
chr4 (48-100)||(11425943-11425995)
chr4 (138-166)||(14549695-14549723)
chr4 (48-100)||(19610324-19610376)
chr4 (48-100)||(25091653-25091705)
chr4 (48-100)||(42875797-42875849)
chr4 (48-100)||(53630474-53630526)
[»] scaffold0220 (2 HSPs)
scaffold0220 (29-216)||(13833-14019)
scaffold0220 (9-101)||(19953-20045)
[»] scaffold0328 (1 HSPs)
scaffold0328 (47-218)||(18639-18811)
[»] chr3 (55 HSPs)
chr3 (47-218)||(14641547-14641718)
chr3 (47-156)||(17208468-17208577)
chr3 (35-211)||(14152386-14152562)
chr3 (47-138)||(14520408-14520499)
chr3 (47-136)||(29907603-29907692)
chr3 (47-136)||(29948769-29948858)
chr3 (47-136)||(29997923-29998012)
chr3 (48-138)||(5215608-5215699)
chr3 (47-137)||(15566706-15566797)
chr3 (47-111)||(22841278-22841342)
chr3 (55-124)||(45803338-45803407)
chr3 (62-126)||(2247880-2247944)
chr3 (47-154)||(3160626-3160732)
chr3 (47-153)||(21845651-21845756)
chr3 (138-199)||(11563627-11563687)
chr3 (47-111)||(2841505-2841569)
chr3 (48-111)||(54875474-54875537)
chr3 (35-157)||(16050871-16050992)
chr3 (88-138)||(48631294-48631344)
chr3 (138-188)||(49968948-49968998)
chr3 (138-191)||(9511005-9511058)
chr3 (138-191)||(9518980-9519033)
chr3 (47-124)||(12917305-12917382)
chr3 (47-111)||(3527156-3527220)
chr3 (47-111)||(6156700-6156763)
chr3 (47-111)||(6159394-6159458)
chr3 (37-138)||(17684824-17684926)
chr3 (46-110)||(24548952-24549016)
chr3 (109-154)||(13520404-13520449)
chr3 (90-138)||(53646100-53646149)
chr3 (90-138)||(54330348-54330397)
chr3 (47-111)||(14442164-14442228)
chr3 (48-100)||(17539106-17539158)
chr3 (138-198)||(50348115-50348175)
chr3 (47-138)||(6003148-6003238)
chr3 (142-200)||(14508747-14508806)
chr3 (47-138)||(50350815-50350908)
chr3 (47-101)||(33565086-33565140)
chr3 (138-171)||(10563638-10563671)
chr3 (138-171)||(17044896-17044929)
chr3 (138-171)||(17518962-17518995)
chr3 (138-171)||(17533824-17533857)
chr3 (47-100)||(24177735-24177788)
chr3 (46-111)||(24547189-24547254)
chr3 (138-171)||(40807926-40807959)
chr3 (47-100)||(40807996-40808049)
chr3 (47-100)||(44274418-44274471)
chr3 (138-171)||(49900660-49900693)
chr3 (20-68)||(325110-325158)
chr3 (48-100)||(11259431-11259483)
chr3 (48-100)||(17044966-17045018)
chr3 (48-100)||(17047126-17047178)
chr3 (48-100)||(17541434-17541486)
chr3 (48-100)||(22306583-22306635)
chr3 (138-174)||(42324061-42324097)
[»] chr6 (37 HSPs)
chr6 (47-218)||(19825485-19825656)
chr6 (9-156)||(15998833-15998980)
chr6 (46-138)||(21683073-21683164)
chr6 (126-200)||(17318200-17318274)
chr6 (47-136)||(18982536-18982625)
chr6 (47-138)||(23658050-23658142)
chr6 (48-136)||(20410512-20410600)
chr6 (47-111)||(29045260-29045324)
chr6 (47-138)||(1818915-1819005)
chr6 (47-154)||(34140455-34140560)
chr6 (88-138)||(24506155-24506205)
chr6 (47-111)||(10446206-10446270)
chr6 (47-171)||(15890711-15890834)
chr6 (138-198)||(28948477-28948537)
chr6 (35-138)||(31734669-31734772)
chr6 (47-154)||(34153071-34153176)
chr6 (138-184)||(23501588-23501634)
chr6 (90-138)||(7217285-7217333)
chr6 (14-66)||(18259140-18259192)
chr6 (93-136)||(18982379-18982422)
chr6 (9-66)||(16966800-16966857)
chr6 (90-138)||(22557210-22557259)
chr6 (47-138)||(25921963-25922054)
chr6 (142-177)||(18585729-18585764)
chr6 (47-125)||(13285723-13285801)
chr6 (138-188)||(19401007-19401057)
chr6 (90-211)||(23431488-23431609)
chr6 (138-171)||(7827902-7827935)
chr6 (29-66)||(20183754-20183791)
chr6 (29-66)||(22152200-22152237)
chr6 (138-171)||(23150376-23150409)
chr6 (138-171)||(27330070-27330103)
chr6 (138-171)||(27390810-27390843)
chr6 (48-100)||(7827972-7828024)
chr6 (37-101)||(12041609-12041673)
chr6 (48-100)||(19655231-19655283)
chr6 (48-100)||(23150287-23150339)
[»] chr7 (58 HSPs)
chr7 (47-177)||(708428-708558)
chr7 (47-154)||(19195558-19195664)
chr7 (46-138)||(43745618-43745710)
chr7 (47-156)||(15575648-15575757)
chr7 (143-218)||(17070384-17070459)
chr7 (35-136)||(8513740-8513842)
chr7 (47-156)||(20252181-20252290)
chr7 (47-138)||(47095414-47095505)
chr7 (35-136)||(8488081-8488183)
chr7 (46-156)||(4690661-4690771)
chr7 (47-156)||(18874664-18874772)
chr7 (47-110)||(38299738-38299801)
chr7 (48-138)||(43276744-43276834)
chr7 (46-156)||(48212725-48212837)
chr7 (47-111)||(16250221-16250285)
chr7 (138-198)||(13132410-13132469)
chr7 (62-126)||(34958319-34958383)
chr7 (47-111)||(58412-58476)
chr7 (47-111)||(13315081-13315145)
chr7 (138-198)||(15095726-15095785)
chr7 (85-156)||(16186857-16186928)
chr7 (47-101)||(3287743-3287797)
chr7 (138-184)||(15140130-15140176)
chr7 (88-138)||(42565872-42565922)
chr7 (35-177)||(47974807-47974948)
chr7 (48-105)||(19283051-19283108)
chr7 (47-111)||(13744509-13744573)
chr7 (52-116)||(15700887-15700951)
chr7 (138-198)||(33002064-33002124)
chr7 (138-198)||(48807415-48807474)
chr7 (138-177)||(8135326-8135365)
chr7 (47-138)||(15700734-15700824)
chr7 (48-111)||(25943256-25943319)
chr7 (90-138)||(9743120-9743169)
chr7 (62-126)||(831864-831928)
chr7 (62-126)||(1197044-1197108)
chr7 (47-111)||(8930764-8930828)
chr7 (47-171)||(12127162-12127285)
chr7 (138-174)||(13698728-13698764)
chr7 (47-111)||(18570636-18570700)
chr7 (47-139)||(21661218-21661309)
chr7 (96-138)||(15119354-15119397)
chr7 (139-177)||(14274256-14274294)
chr7 (38-100)||(20214147-20214209)
chr7 (47-137)||(33060402-33060491)
chr7 (138-171)||(12465349-12465382)
chr7 (138-171)||(13147561-13147594)
chr7 (90-138)||(14160897-14160946)
chr7 (47-100)||(14180397-14180450)
chr7 (90-138)||(14318034-14318083)
chr7 (47-100)||(20586352-20586405)
chr7 (138-171)||(20620216-20620249)
chr7 (48-100)||(8851159-8851211)
chr7 (48-100)||(11067468-11067520)
chr7 (48-100)||(12372274-12372326)
chr7 (48-100)||(12465260-12465312)
chr7 (48-100)||(32433589-32433641)
chr7 (37-101)||(35771430-35771494)
[»] chr8 (39 HSPs)
chr8 (46-154)||(36732410-36732518)
chr8 (48-156)||(18816295-18816403)
chr8 (48-156)||(21514635-21514743)
chr8 (47-138)||(22208230-22208322)
chr8 (46-156)||(4380615-4380725)
chr8 (48-138)||(22258306-22258397)
chr8 (47-138)||(12577841-12577932)
chr8 (47-154)||(21676592-21676697)
chr8 (136-198)||(20022120-20022181)
chr8 (47-153)||(21678845-21678949)
chr8 (47-135)||(21676499-21676585)
chr8 (52-111)||(22483775-22483834)
chr8 (62-126)||(18023570-18023634)
chr8 (138-198)||(45469309-45469368)
chr8 (47-111)||(21399706-21399770)
chr8 (47-111)||(21794199-21794263)
chr8 (47-111)||(22345153-22345217)
chr8 (47-111)||(22356813-22356877)
chr8 (47-111)||(22610266-22610330)
chr8 (138-198)||(31722583-31722642)
chr8 (62-126)||(38184926-38184990)
chr8 (90-211)||(22474646-22474767)
chr8 (62-124)||(22483914-22483976)
chr8 (48-211)||(21579206-21579368)
chr8 (47-110)||(36305988-36306050)
chr8 (90-211)||(12037205-12037326)
chr8 (14-100)||(17906815-17906901)
chr8 (138-184)||(22318000-22318046)
chr8 (90-138)||(29762909-29762958)
chr8 (37-198)||(39694266-39694426)
chr8 (48-111)||(18834412-18834474)
chr8 (48-171)||(20083638-20083760)
chr8 (139-198)||(22532222-22532281)
chr8 (139-198)||(22536907-22536966)
chr8 (96-138)||(22966772-22966815)
chr8 (138-171)||(5082301-5082334)
chr8 (90-138)||(17978457-17978506)
chr8 (138-171)||(19140695-19140728)
chr8 (90-138)||(41680174-41680223)
[»] scaffold0676 (1 HSPs)
scaffold0676 (47-154)||(2827-2934)
[»] scaffold1186 (1 HSPs)
scaffold1186 (47-156)||(1964-2073)
[»] scaffold0005 (1 HSPs)
scaffold0005 (47-156)||(186195-186304)
[»] chr5 (22 HSPs)
chr5 (47-154)||(16063697-16063804)
chr5 (47-156)||(18744818-18744927)
chr5 (48-156)||(23199207-23199315)
chr5 (47-154)||(6551289-6551396)
chr5 (46-138)||(660752-660842)
chr5 (52-156)||(1627071-1627176)
chr5 (35-138)||(26762364-26762467)
chr5 (47-111)||(32607315-32607379)
chr5 (46-138)||(1626916-1627008)
chr5 (14-66)||(21914458-21914510)
chr5 (139-177)||(30138064-30138102)
chr5 (90-138)||(14025848-14025897)
chr5 (138-171)||(17876133-17876166)
chr5 (46-138)||(26749993-26750085)
chr5 (48-177)||(36508633-36508761)
chr5 (96-138)||(24068191-24068234)
chr5 (138-177)||(31456884-31456923)
chr5 (90-211)||(8833247-8833368)
chr5 (47-101)||(21398643-21398697)
chr5 (47-124)||(20313253-20313328)
chr5 (47-100)||(21300043-21300096)
chr5 (93-138)||(21504102-21504147)
[»] scaffold0056 (1 HSPs)
scaffold0056 (46-156)||(18219-18329)
[»] scaffold0878 (1 HSPs)
scaffold0878 (47-138)||(3421-3512)
[»] chr2 (30 HSPs)
chr2 (47-138)||(21315475-21315566)
chr2 (47-138)||(21335265-21335356)
chr2 (46-156)||(23610570-23610680)
chr2 (47-156)||(21369237-21369346)
chr2 (47-211)||(149500-149668)
chr2 (138-184)||(3539753-3539799)
chr2 (88-138)||(25584302-25584352)
chr2 (138-183)||(25142121-25142166)
chr2 (47-111)||(23801485-23801549)
chr2 (88-135)||(19647199-19647246)
chr2 (47-138)||(20005970-20006060)
chr2 (90-215)||(28652593-28652717)
chr2 (47-124)||(34491239-34491316)
chr2 (47-111)||(28344987-28345051)
chr2 (138-177)||(357805-357844)
chr2 (138-177)||(1383632-1383671)
chr2 (138-204)||(19201289-19201355)
chr2 (138-171)||(24884400-24884433)
chr2 (138-198)||(27852570-27852630)
chr2 (138-198)||(22251537-22251597)
chr2 (47-171)||(24516116-24516239)
chr2 (47-127)||(45535899-45535978)
chr2 (138-171)||(5031218-5031251)
chr2 (138-171)||(9975859-9975892)
chr2 (138-171)||(17307416-17307449)
chr2 (47-100)||(17307486-17307539)
chr2 (138-171)||(24780929-24780962)
chr2 (47-100)||(40912320-40912373)
chr2 (48-100)||(5031129-5031181)
chr2 (48-100)||(24780840-24780892)
[»] scaffold0007 (3 HSPs)
scaffold0007 (47-211)||(16418-16584)
scaffold0007 (47-124)||(18700-18777)
scaffold0007 (93-136)||(18902-18945)
[»] scaffold0247 (1 HSPs)
scaffold0247 (48-140)||(1036-1128)
[»] scaffold0061 (2 HSPs)
scaffold0061 (47-136)||(14585-14674)
scaffold0061 (47-136)||(23643-23732)
[»] scaffold0231 (1 HSPs)
scaffold0231 (47-138)||(17520-17611)
[»] scaffold0203 (1 HSPs)
scaffold0203 (47-156)||(17939-18048)
[»] scaffold0505 (1 HSPs)
scaffold0505 (48-138)||(4898-4988)
[»] scaffold1256 (1 HSPs)
scaffold1256 (46-135)||(2198-2287)
[»] scaffold0516 (1 HSPs)
scaffold0516 (46-138)||(5303-5395)
[»] scaffold1766 (1 HSPs)
scaffold1766 (9-100)||(657-748)
[»] scaffold0853 (1 HSPs)
scaffold0853 (48-156)||(2454-2564)
[»] scaffold0213 (2 HSPs)
scaffold0213 (47-138)||(19169-19260)
scaffold0213 (101-138)||(19123-19160)
[»] scaffold0020 (3 HSPs)
scaffold0020 (9-100)||(168960-169051)
scaffold0020 (35-138)||(174183-174286)
scaffold0020 (48-100)||(143611-143663)
[»] scaffold0431 (1 HSPs)
scaffold0431 (48-138)||(5592-5685)
[»] scaffold0369 (1 HSPs)
scaffold0369 (47-156)||(15615-15723)
[»] scaffold0108 (1 HSPs)
scaffold0108 (47-128)||(6390-6471)
[»] scaffold0032 (2 HSPs)
scaffold0032 (47-138)||(61847-61937)
scaffold0032 (9-66)||(68331-68388)
[»] scaffold0174 (4 HSPs)
scaffold0174 (47-109)||(5445-5507)
scaffold0174 (48-124)||(11592-11668)
scaffold0174 (47-111)||(19845-19909)
scaffold0174 (138-171)||(11320-11353)
[»] scaffold0594 (1 HSPs)
scaffold0594 (47-124)||(2223-2300)
[»] scaffold0092 (1 HSPs)
scaffold0092 (47-138)||(38441-38531)
[»] scaffold0058 (1 HSPs)
scaffold0058 (47-154)||(59655-59761)
[»] scaffold0076 (1 HSPs)
scaffold0076 (14-68)||(22465-22519)
[»] scaffold0139 (2 HSPs)
scaffold0139 (47-138)||(40160-40253)
scaffold0139 (47-131)||(23503-23587)
[»] scaffold0004 (5 HSPs)
scaffold0004 (47-124)||(66071-66148)
scaffold0004 (35-116)||(111344-111425)
scaffold0004 (48-111)||(73076-73139)
scaffold0004 (47-111)||(75926-75990)
scaffold0004 (138-171)||(328379-328412)
[»] scaffold0298 (1 HSPs)
scaffold0298 (62-126)||(359-423)
[»] scaffold0337 (1 HSPs)
scaffold0337 (47-138)||(3167-3257)
[»] scaffold0148 (1 HSPs)
scaffold0148 (47-211)||(8731-8897)
[»] scaffold0017 (2 HSPs)
scaffold0017 (51-138)||(26689-26776)
scaffold0017 (47-138)||(23576-23666)
[»] scaffold0086 (1 HSPs)
scaffold0086 (47-124)||(35185-35262)
[»] scaffold0180 (1 HSPs)
scaffold0180 (62-126)||(10570-10633)
[»] scaffold0394 (1 HSPs)
scaffold0394 (47-138)||(7513-7603)
[»] scaffold0251 (1 HSPs)
scaffold0251 (138-199)||(20174-20235)
[»] scaffold0338 (2 HSPs)
scaffold0338 (9-66)||(10723-10780)
scaffold0338 (139-177)||(161-199)
[»] scaffold0037 (3 HSPs)
scaffold0037 (137-190)||(117889-117941)
scaffold0037 (138-198)||(113057-113116)
scaffold0037 (138-167)||(81501-81530)
[»] scaffold0628 (1 HSPs)
scaffold0628 (138-198)||(1148-1207)
[»] scaffold0371 (1 HSPs)
scaffold0371 (35-138)||(10433-10536)
[»] scaffold0031 (2 HSPs)
scaffold0031 (47-111)||(127342-127406)
scaffold0031 (138-184)||(108208-108255)
[»] scaffold0379 (1 HSPs)
scaffold0379 (48-111)||(10937-10999)
[»] scaffold0125 (1 HSPs)
scaffold0125 (88-138)||(28513-28564)
[»] scaffold0021 (2 HSPs)
scaffold0021 (88-131)||(17075-17118)
scaffold0021 (88-131)||(26606-26649)
[»] scaffold0848 (1 HSPs)
scaffold0848 (138-188)||(2110-2160)
[»] scaffold0555 (1 HSPs)
scaffold0555 (47-113)||(8745-8811)
[»] scaffold0217 (1 HSPs)
scaffold0217 (88-150)||(28664-28726)
[»] scaffold0175 (1 HSPs)
scaffold0175 (144-198)||(8545-8598)
[»] scaffold0162 (1 HSPs)
scaffold0162 (98-156)||(23932-23990)
[»] scaffold0385 (1 HSPs)
scaffold0385 (90-138)||(307-356)
[»] scaffold1941 (1 HSPs)
scaffold1941 (47-171)||(68-191)
[»] scaffold0121 (1 HSPs)
scaffold0121 (101-208)||(20092-20199)
[»] scaffold0098 (1 HSPs)
scaffold0098 (47-111)||(40096-40160)
[»] scaffold0083 (2 HSPs)
scaffold0083 (138-190)||(10842-10894)
scaffold0083 (138-170)||(5124-5156)
[»] scaffold0048 (1 HSPs)
scaffold0048 (47-111)||(68725-68789)
[»] scaffold0035 (1 HSPs)
scaffold0035 (47-111)||(43786-43848)
[»] scaffold0001 (6 HSPs)
scaffold0001 (48-100)||(31994-32046)
scaffold0001 (48-100)||(37301-37353)
scaffold0001 (138-171)||(31924-31957)
scaffold0001 (138-171)||(37231-37264)
scaffold0001 (47-100)||(77687-77740)
scaffold0001 (29-66)||(499092-499129)
[»] scaffold1800 (1 HSPs)
scaffold1800 (47-138)||(570-660)
[»] scaffold0230 (1 HSPs)
scaffold0230 (142-177)||(6778-6813)
[»] scaffold0165 (1 HSPs)
scaffold0165 (47-138)||(31892-31982)
[»] scaffold0156 (1 HSPs)
scaffold0156 (138-177)||(16528-16567)
[»] scaffold0149 (2 HSPs)
scaffold0149 (138-177)||(21535-21574)
scaffold0149 (138-171)||(29662-29695)
[»] scaffold0145 (1 HSPs)
scaffold0145 (96-138)||(8086-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (96-138)||(29273-29316)
[»] scaffold0059 (1 HSPs)
scaffold0059 (47-138)||(49692-49782)
[»] scaffold0040 (1 HSPs)
scaffold0040 (138-177)||(106140-106179)
[»] scaffold0462 (2 HSPs)
scaffold0462 (104-138)||(1279-1313)
scaffold0462 (104-138)||(6785-6819)
[»] scaffold0063 (1 HSPs)
scaffold0063 (90-211)||(62608-62729)
[»] scaffold1939 (1 HSPs)
scaffold1939 (93-138)||(90-135)
[»] scaffold1633 (2 HSPs)
scaffold1633 (138-171)||(1135-1168)
scaffold1633 (48-100)||(1205-1257)
[»] scaffold1283 (2 HSPs)
scaffold1283 (138-171)||(557-590)
scaffold1283 (48-100)||(468-520)
[»] scaffold0737 (1 HSPs)
scaffold0737 (138-171)||(4803-4836)
[»] scaffold0632 (2 HSPs)
scaffold0632 (138-171)||(1095-1128)
scaffold0632 (47-100)||(1165-1218)
[»] scaffold0630 (1 HSPs)
scaffold0630 (90-138)||(9025-9074)
[»] scaffold0439 (1 HSPs)
scaffold0439 (46-138)||(4383-4475)
[»] scaffold0261 (1 HSPs)
scaffold0261 (98-138)||(6468-6509)
[»] scaffold0241 (2 HSPs)
scaffold0241 (138-171)||(2494-2527)
scaffold0241 (138-171)||(3112-3145)
[»] scaffold0205 (1 HSPs)
scaffold0205 (47-124)||(5615-5690)
[»] scaffold0113 (1 HSPs)
scaffold0113 (47-100)||(35490-35543)
[»] scaffold0111 (1 HSPs)
scaffold0111 (138-171)||(12622-12655)
[»] scaffold0080 (1 HSPs)
scaffold0080 (138-171)||(21882-21915)
[»] scaffold0065 (1 HSPs)
scaffold0065 (29-66)||(55975-56012)
[»] scaffold0859 (1 HSPs)
scaffold0859 (138-198)||(4586-4645)
[»] scaffold0123 (1 HSPs)
scaffold0123 (9-101)||(7276-7368)
[»] scaffold0047 (1 HSPs)
scaffold0047 (48-100)||(79049-79101)
[»] scaffold0036 (1 HSPs)
scaffold0036 (48-100)||(78185-78237)
[»] scaffold0028 (1 HSPs)
scaffold0028 (142-174)||(3145-3177)
[»] scaffold0019 (1 HSPs)
scaffold0019 (48-100)||(24131-24183)
[»] scaffold0008 (1 HSPs)
scaffold0008 (138-198)||(135593-135652)


Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 8275950 - 8276159
Alignment:
Q  9 gagatgaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggttt 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8275950 gagaagaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggttt 8276049  T
Q  109 aaccttgtagttgttgatagttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataa 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8276050 aaccttgtagttgttgatatttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataa 8276149  T
Q  209 ttgatgtcca 218  Q
    ||| ||||||    
T  8276150 ttggtgtcca 8276159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 38056671 - 38056842
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38056671 ctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttttgggaat 38056770  T
Q  147 taggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattgatgtcca 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38056771 taggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattggtgtcca 38056842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 28476733 - 28476842
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | | |||    
T  28476733 ctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 28476832  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  28476833 tagggttaga 28476842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 50544925 - 50544841
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttt 131  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50544925 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 50544841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 24719509 - 24719600
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  24719509 cctatggtaagggtg-gactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgtt 24719600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 12710920 - 12710829
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||| | || |||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  12710920 ctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaaaagggtttaatcttgtagttgttgttagttttgatgtt 12710829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 4595933 - 4596007
Alignment:
Q  136 gttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataatt 210  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||    
T  4595933 gttttgggaattagatttagaagttgtaattggttgatttaagagtagataatccgatgaattaggttgataatt 4596007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 22145666 - 22145752
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttga 134  Q
    ||||||||||||| ||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaaccttgtagttgttgttaggtttga 22145752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 24007224 - 24007315
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaacc-ttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| |||||||||| ||| ||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  24007224 ctaaggtaagggtgggactagctttctctgataatga-ttgtataattctgaaaaaaggtttaacctttgtagttgttgttagttttgatgtt 24007315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 17901793 - 17901857
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  17901793 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 17901857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 211
Target Start/End: Complemental strand, 8306659 - 8306494
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgatagttttgatgttttggga 144  Q
    |||||||||| ||| |||||||||| |||||||||| ||||||||||||| |||| |||||||||   |||| ||| ||| ||||||||||||| | | |    
T  8306659 ctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacatgttgtcgtt-ttgttagttttgatgttatagaa 8306561  T
Q  145 attaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattg 211  Q
    |||||| || ||| ||  ||||| ||| |  |||||||| ||||| ||||||||| |||||||||||    
T  8306560 attagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatgaattaaggtaataattg 8306494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 6834229 - 6834152
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    |||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  6834229 ctaaggcaagggtgatactagctttctctaataatgagttgtataattctgaaaaagggtttaacatggttgttgttg 6834152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 39061373 - 39061283
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||| ||| ||||| | || | |||| ||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39061373 ctaaggtaagagtgggactaaccttctgtaatcatgagta-tataattctgaaaaaaggtttaaccttgtagttgttgatagttttgatgtt 39061283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 34392821 - 34392757
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  34392821 ctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 34392757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 635003 - 635064
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggttt 108  Q
    |||||||||||||| |||||||||| |||||||||  ||||||||||||| |||||||||||    
T  635003 ctaaggtaagggtgagactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 35895152 - 35895088
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||| ||||  ||||||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  35895152 ctaaggtatgggtaggactagctttatctaataatgggttgtatgattctgaaaaaggttttaac 35895088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 45499595 - 45499531
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| |||||  ||| |||||||||    
T  45499595 ctaaggtaagggtgagactagctttctctaataatgggttgtatgattctataaaggggtttaac 45499531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 21188033 - 21188123
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||||||| ||| ||||| |||||  ||||||||||||||||||||||||||    
T  21188033 ctaaggtaagggtgggactaaccttttttaatcatgagta-tataattttgagaaaggatttaattttgtagttgttgatagttttgatgtt 21188123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 44822110 - 44822149
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  44822110 tttgggaattaggtttagaagttgtaattggttgttttaa 44822149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 51324466 - 51324415
Alignment:
Q  139 ttgggaattaggtttagaagttgtaattggttgatttaagagtagataatct 190  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||| |||||    
T  51324466 ttgggaattaggtttaaaagttgtaattggttgttttaatagtagaaaatct 51324415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 7320683 - 7320729
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtaga 184  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  7320683 tttgggaattatgtttagatgttgtaattggttgatttaatagtaga 7320729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 7052011 - 7052050
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  7052011 tttgggaattaggtttagaaattgtaattggttgttttaa 7052050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 7703175 - 7703136
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagtt 86  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  7703175 ctaaggtaagggtgggactagctttctctaataatgagtt 7703136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 19676763 - 19676641
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaatt 147  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||  | ||||| | | || || | |  ||||| |||   ||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcat-gttgtaggttgtagttatgagaatttgggaatt 19676665  T
Q  148 aggtttagaagttgtaattggttg 171  Q
    |||||| |||||||||||||||||    
T  19676664 aggttttgaagttgtaattggttg 19676641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 20708058 - 20708148
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || | ||| | |||||| |||||||||||||||||| ||||| |||  |||||||||| || |||||||    
T  20708058 ctaaggtaagggtgggactaaccttctttaaca-tgagttctataattctgaaaaaggggttaactttgatgttgttgataattgtgatgtt 20708148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 40390155 - 40390112
Alignment:
Q  96 tgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  40390155 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 40390112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 14792604 - 14792642
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgatag 128  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  14792604 taatcctgaaaaagggtttaaccttgtagttgttaatag 14792642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 20588690 - 20588636
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa 102  Q
    ||||||||||||| || ||||||| |||||||||| ||||||| ||||| |||||    
T  20588690 taaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaa 20588636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 20593228 - 20593174
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa 102  Q
    ||||||||||||| || ||||||| |||||||||| ||||||| ||||| |||||    
T  20593228 taaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaa 20593174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 21243799 - 21243837
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgatag 128  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  21243799 taatcctgaaaaagggtttaaccttgtagttgttaatag 21243837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 18121614 - 18121565
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| |||||||||| |||||||||||||||||| ||| |||||||||||    
T  18121614 taatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgtt 18121565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 20633723 - 20633756
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  20633723 tttgggaattaggttttgaagttgtaattggttg 20633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 38887128 - 38887177
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| |||||||||||||||| |||||||||||| ||| |||||||||||    
T  38887128 taatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgtt 38887177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 42913102 - 42913049
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  42913102 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 42913049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 12327742 - 12327806
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||| || ||||||    
T  12327742 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaac 12327806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 21046049 - 21046101
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 21046101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 42913008 - 42912952
Alignment:
Q  142 ggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  42913008 ggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatt 42912952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 51336532 - 51336468
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||| || ||||||    
T  51336532 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaaatggatttaac 51336468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 9639063 - 9638892
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9639063 ctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttgttgataattttgatgttttgggaat 9638964  T
Q  147 taggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattgatgtcca 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9638963 taggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattggtgtcca 9638892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 14631188 - 14631079
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | | |||    
T  14631188 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 14631089  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  14631088 tagggttaga 14631079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 16296991 - 16296900
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  16296991 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacctggtagttgttgttagttttgatgtt 16296900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 25513904 - 25513795
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| | | |||    
T  25513904 ctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttgttagttttgatgttatagaaat 25513805  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  25513804 tagggttaga 25513795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 35661002 - 35660902
Alignment:
Q  54 aagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaattaggttt 153  Q
    ||||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |  |||||||||||    
T  35661002 aagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttgtagttgttgttagttttgatgttatatgaattaggttt 35660903  T
Q  154 a 154  Q
    |    
T  35660902 a 35660902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 26446261 - 26446151
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaa 145  Q
    ||||| ||||||||  |||||||||| |||||||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| | | ||    
T  26446261 cctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaatcttgtagttgttgttagttttgatgttatagaaa 26446162  T
Q  146 ttaggtttaga 156  Q
    ||||| |||||    
T  26446161 ttagggttaga 26446151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 33186955 - 33186792
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgttttgggaat 146  Q
    ||||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |  ||||    
T  33186955 taaggtaggggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgt-agaat 33186857  T
Q  147 taggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattg 211  Q
    |||| || |||  |  ||||| |||    |||||||||||||| ||||||||||| | |||||||    
T  33186856 tagggtttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattg 33186792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 12424290 - 12424383
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctg--aaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||  |||||||||||||| ||||||||||| ||| |||||||||||    
T  12424290 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttttgatgtt 12424383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 2424385 - 2424477
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||| ||||| |||| ||||||  | |||||||||||| ||||||||||||||| ||||||||||||  |||||||||||||    
T  2424385 cctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaatcttgtagttgttattagttttgatgtt 2424477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 15239815 - 15239882
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaacctt 114  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  15239815 ctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaaaagggtttaacctt 15239882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 13847264 - 13847193
Alignment:
Q  37 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggttt 108  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||| ||||||||||||| ||||| |||||    
T  13847264 atcgattaacctaaggtaagggtgagactagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 15747787 - 15747851
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  15747787 gactaactttctctaaagatgagttgtataattctgaaaaagggtttaacattgtagttgttgat 15747851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 17143057 - 17142996
Alignment:
Q  65 tagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    ||||||| |||||  |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  17143057 tagctttctctaaagatgagttgtataattctgaaaaggggtttaacattgtagttgttgat 17142996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 14477684 - 14477594
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||  |||| | || | |||| ||||||  ||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  14477684 ctaaggtaagggtggcactaaccttctttaatcatgagta-tataattctgaaaaagggtttgatcttgtagtcgttgatagttttgatgtt 14477594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 18463076 - 18462986
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||| |||| ||||| | || | |||| ||||||  |||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  18463076 ctaaggtaaaggtgggactaaccttctttaatcatgagta-tataattctgaaaaagggtttaattttgtagttgttaatagttttgatgtt 18462986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 9622542 - 9622478
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||| | ||||| |||| |||||||||    
T  9622542 ctaaggtaagggtgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaac 9622478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 10273436 - 10273372
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||| ||||    
T  10273436 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtataac 10273372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 55583249 - 55583185
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||| | |||| |||||||||    
T  55583249 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattataaaaaggggtttaac 55583185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 12623327 - 12623278
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  12623327 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 12623278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 19565959 - 19566008
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  19565959 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 19566008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 37019723 - 37019670
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||||||||| |||| ||||||  | ||||||||||||||||||    
T  37019723 ctaaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaa 37019670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 45314124 - 45314173
Alignment:
Q  90 taattctgaaaaagggtttaac-cttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||    
T  45314124 taattctgaaaaagggtttaacatttgtagttgttgttagttttgatgtt 45314173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 26921550 - 26921598
Alignment:
Q  90 taattctgaaaaagggtttaac-cttgtagttgttgatagttttgatgt 137  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  26921550 taattctgaaaaagggtttaacatttgtagttgttgttagttttgatgt 26921598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 15115275 - 15115222
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  15115275 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15115222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 16998488 - 16998455
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  16998488 tttgggaattaggttttgaagttgtaattggttg 16998455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 19739809 - 19739772
Alignment:
Q  29 ggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  19739809 ggctgccaatcgattatcctaaggtaagggtgagacta 19739772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 25091616 - 25091583
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  25091616 tttgggaattaggttttgaagttgtaattggttg 25091583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 27996862 - 27996825
Alignment:
Q  29 ggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  27996862 ggctgccaatcgattatcctaaggtaagggtgggacta 27996825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 46741210 - 46741177
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgtt 123  Q
    |||| |||||||||||||||||||||||||||||    
T  46741210 taatcctgaaaaagggtttaaccttgtagttgtt 46741177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 53630563 - 53630596
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  53630563 tttgggaattaggttttgaagttgtaattggttg 53630596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 11425995 - 11425943
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 11425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 14549723 - 14549695
Alignment:
Q  138 tttgggaattaggtttagaagttgtaatt 166  Q
    |||||||||||||||||||||||||||||    
T  14549723 tttgggaattaggtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 19610376 - 19610324
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  19610376 taaggtaagggtgagactaactttctctaattttaagttgtataattctgaaa 19610324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 25091705 - 25091653
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 25091653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 42875849 - 42875797
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||||| ||||  | ||||||||||||||||||    
T  42875849 taaggtaagggtgggactaactttatataattctaagttgtataattctgaaa 42875797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 53630474 - 53630526
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 53630526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 14019 - 13833
Alignment:
Q  29 ggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatag 128  Q
    |||||||||||| | ||| ||||||||||||| |||||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||||| |||    
T  14019 ggctgccgatcgttaatc-taaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaaccttgaagttgttgttag 13921  T
Q  129 ttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattgatgtc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  13920 ttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattggggtaataattggtgtc 13833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 20045 - 19953
Alignment:
Q  9 gagatgaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 101  Q
    |||| ||||||| ||||||  |||  |||||||||| ||||||||||||||| ||||| |||| ||||||  | |||  ||||||||||||||    
T  20045 gagaagaaccaaggaggaaaagctttcgatcgattaacctaaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaa 19953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 18639 - 18811
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgta-taattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaa 145  Q
    |||||||||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  18639 ctaaggtaagggtgggactagctttctctaataatgagttgtaataattttgaaaaaaggtttaaccttgtagttgttgttagttttgatgttttgggaa 18738  T
Q  146 ttaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattgatgtcca 218  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  18739 ttaggtttagaagttgtaattggttgatttaagactagataatctgatgaattagggtaataattggtgtcca 18811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 14641547 - 14641718
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| || ||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  14641547 ctaaggtaagggtgggattagctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagtattgatgttttgggaat 14641646  T
Q  147 taggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattgatgtcca 218  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14641647 taggtttagaagttgtaatttgttgatttaagagtagataatctgatgaattagggtaataattggtgtcca 14641718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 17208577 - 17208468
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| | | |||    
T  17208577 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttatagaaat 17208478  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  17208477 tagggttaga 17208468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 35 - 211
Target Start/End: Original strand, 14152386 - 14152562
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttg 133  Q
    ||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  || ||||||    
T  14152386 cgatccattaacctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaaccttgtagttgttagtaggttttg 14152485  T
Q  134 atgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattg 211  Q
    ||||| |  |||||||| || |||  |  ||||| |||  | |||||||||||||| ||||||||||| | |||||||    
T  14152486 atgttgt-agaattagggtttgaaactaaaattgattgtataaagagtagataatccgatgaattaggttgataattg 14152562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 14520499 - 14520408
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| |||||||||| | |||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  14520499 ctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaaccttgtagttgttgttagttttgatgtt 14520408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 29907692 - 29907603
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatg 136  Q
    |||||||||||||| |||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  29907692 ctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatg 29907603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 29948858 - 29948769
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatg 136  Q
    |||||||||||||| |||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  29948858 ctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatg 29948769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 29998012 - 29997923
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatg 136  Q
    |||||||||||||| |||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  29998012 ctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatg 29997923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 5215699 - 5215608
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||||||    
T  5215699 taaggtaagggtggcactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttattaataggttttgatgtt 5215608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 15566797 - 15566706
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgt 137  Q
    |||| ||||||||| ||||| |||| ||||||  | ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  15566797 ctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgt 15566706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 22841278 - 22841342
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  22841278 ctaatgtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 45803338 - 45803407
Alignment:
Q  55 agggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    |||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| | || |||||||    
T  45803338 agggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatcgttgttgttg 45803407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 2247880 - 2247944
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  2247880 gactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttgat 2247944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 3160626 - 3160732
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||||||||| |||| ||||||||| ||||||||||||||||||||||| || | | |||    
T  3160626 ctaaggtaagggtgagactaaccttctttaatcatgagta-tataattctaaaaatgggtttaactttgtagttgttgatagttttgatattatagaaat 3160724  T
Q  147 taggttta 154  Q
    ||||||||    
T  3160725 taggttta 3160732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 21845651 - 21845756
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| | || | |||| || |||  |||| |||||||||||||||||| |||||||||||| |||||||||||||| | | |||    
T  21845651 ctaaggtaagggtgggactaaccttctttaatcataagta-tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaaat 21845749  T
Q  147 taggttt 153  Q
    |||||||    
T  21845750 taggttt 21845756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 11563687 - 11563627
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatta 199  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||    
T  11563687 tttgggaattaggtttaaaagttgtaattggttgaattaagagtaga-aatctgttgaatta 11563627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 2841505 - 2841569
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||  ||||||||    
T  2841505 ctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaagaggtttaac 2841569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 54875474 - 54875537
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    ||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  54875474 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 54875537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 16050992 - 16050871
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgatagtttt 132  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||  |||||||||   |||||  ||||| |||||||    
T  16050992 cgatcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgta--tgttg-tagtttt 16050896  T
Q  133 gatgttttgggaattaggtttagaa 157  Q
    || | |||| |||||||||||||||    
T  16050895 gaggatttgagaattaggtttagaa 16050871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 48631344 - 48631294
Alignment:
Q  88 tataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  48631344 tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgtt 48631294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 49968948 - 49968998
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataat 188  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  49968948 tttgggaattaggtttataagttgtaattggttgatttaatagtagctaat 49968998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 9511005 - 9511058
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctg 191  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  9511005 tttgagaattaggtttagaagttgtaattggttgttttaatagtagaaaatctg 9511058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 9518980 - 9519033
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctg 191  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  9518980 tttgagaattaggtttagaagttgtaattggttgttttaatagtagaaaatctg 9519033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 12917305 - 12917382
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    ||||| |||||||| ||||| |||| |||||||||| ||||||| ||||| |||||||||||||| | || |||||||    
T  12917305 ctaagataagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaacatggttgttgttg 12917382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 3527156 - 3527220
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||| | |||| |||||||||    
T  3527156 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaac 3527220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 6156763 - 6156700
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  6156763 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattct-aaaaggggtttaac 6156700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 6159458 - 6159394
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||| ||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  6159458 ctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaaggggtttaac 6159394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 17684824 - 17684926
Alignment:
Q  37 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgatagttttga 134  Q
    ||||||| || ||||||||||||| |||||| ||| | |||||||| ||||||| ||||| |||| |||||||||  ||||| ||| ||| |||||||||    
T  17684824 atcgattttcttaaggtaagggtgggactagttttctgtaataatgggttgtatgattctaaaaaggggtttaacatcttgttgtt-ttgttagttttga 17684922  T
Q  135 tgtt 138  Q
    ||||    
T  17684923 tgtt 17684926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 24548952 - 24549016
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaa 110  Q
    ||||| ||||||||| ||||| ||||||||||||||| ||||||| ||||| |||| ||||||||    
T  24548952 cctaaagtaagggtgagactaactttatctaataatgggttgtatgattctaaaaaggggtttaa 24549016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 13520449 - 13520404
Alignment:
Q  109 aaccttgtagttgttgatagttttgatgttttgggaattaggttta 154  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||    
T  13520449 aaccttgtagttgttgttagttttgatgttataggaattaggttta 13520404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 53646100 - 53646149
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  53646100 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 53646149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 54330348 - 54330397
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  54330348 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 54330397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 14442228 - 14442164
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| | |||||||| ||||||| ||||| ||||  ||||||||    
T  14442228 ctaaggtaagggtgggactagctttctgtaataatgggttgtatgattctaaaaagcggtttaac 14442164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 17539158 - 17539106
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  17539158 taaggtaagggtgagactaactttatctaattctaagttgtataattctgaaa 17539106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 50348115 - 50348175
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||||||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  50348115 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatt 50348175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 6003238 - 6003148
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || | ||||| |||||| ||||||||||||||||||  |||| |||  |||||||||| || |||||||    
T  6003238 ctaaggtaagggtgggactaaccttctttaata-tgagttctataattctgaaaaaggggctaactttgatgttgttgataattgtgatgtt 6003148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 14508806 - 14508747
Alignment:
Q  142 ggaattaggtttag-aagttgtaattggttgatttaagagtagataatctgatgaattag 200  Q
    |||||||||||| | ||||||||||||||||    |||||||||||||||||||||||||    
T  14508806 ggaattaggttttggaagttgtaattggttgtagaaagagtagataatctgatgaattag 14508747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 50350815 - 50350908
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa--gggtttaacctt-gtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || | |||| ||||||  |||||||||||||||  |||||||||||| |||||| ||| |||||||||||||    
T  50350815 ctaaggtaagggtgggactaaccttctttaatcatgagta-tataattctgaaaaaaggggtttaacctttgtagtttttgttagttttgatgtt 50350908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 33565140 - 33565086
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 101  Q
    |||||||||||||||||||| |||| ||||||  | ||| |||||||||||||||    
T  33565140 ctaaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaa 33565086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 10563671 - 10563638
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  10563671 tttgggaattaggttttgaagttgtaattggttg 10563638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 17044929 - 17044896
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  17044929 tttgggaattaggttttgaagttgtaattggttg 17044896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 17518962 - 17518995
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  17518962 tttgggaattaggttttgaagttgtaattggttg 17518995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 17533824 - 17533857
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  17533824 tttgggaattaggttttgaagttgtaattggttg 17533857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 24177735 - 24177788
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||| | |||| |||||| || ||||||||||||||||||    
T  24177735 ctaaggtaagggtgggacaaactttctctaattataagttgtataattctgaaa 24177788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 24547254 - 24547189
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||| || ||||| |||| |||||||||| ||||||| ||||| |||| | |||||||    
T  24547254 cctaaggtaaggatgagactatctttctctaataatgggttgtatgattctaaaaaggagtttaac 24547189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 40807959 - 40807926
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  40807959 tttgggaattaggttttgaagttgtaattggttg 40807926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 40808049 - 40807996
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  40808049 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40807996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 44274471 - 44274418
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  44274471 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 44274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 49900693 - 49900660
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  49900693 tttgggaattaggttttgaagttgtaattggttg 49900660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 325158 - 325110
Alignment:
Q  20 aagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagc 68  Q
    |||||||| |||||||||||| | ||| ||||||||||||| |||||||    
T  325158 aagaggaaaggctgccgatcgttaatcttaaggtaagggtgggactagc 325110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 11259483 - 11259431
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  11259483 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 11259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 17045018 - 17044966
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 17047178 - 17047126
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 17541486 - 17541434
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 22306583 - 22306635
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 22306635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 42324061 - 42324097
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatt 174  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  42324061 tttggaaattagggttagaagttgtaattggttgatt 42324097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 19825485 - 19825656
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||| |||||||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  19825485 ctaaggtaagggtgagactagctttctctaataatgggttgcataattctgaaaaaggttttaaccttgtagttgttgttagttttgatgttttgagaat 19825584  T
Q  147 taggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattgatgtcca 218  Q
    || |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  19825585 tatgtttagaagttgtaattggttgatttaagagtagatgatatgatgaattagggtaataattggtgtcca 19825656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 15998980 - 15998833
Alignment:
Q  9 gagatgaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggttt 108  Q
    |||| |||||||||||||||||||  || ||||||||||||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||||| ||||    
T  15998980 gagaagaaccaaagaggaagggctatcggtcgattatcctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttt 15998881  T
Q  109 aaccttgtagttgttgatagttttgatgttttgggaattaggtttaga 156  Q
    |||||||||||||||| ||||||||||||| | | ||||||| |||||    
T  15998880 aaccttgtagttgttgttagttttgatgttatagaaattagggttaga 15998833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 21683073 - 21683164
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  21683073 cctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaaccttgtagttgttg-tagttttgatgtt 21683164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 17318200 - 17318274
Alignment:
Q  126 tagttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattag 200  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  17318200 tagttttgatgttttgggaattaggtttagaagttgtgattagttgatttaagaatagataatctgatgaattag 17318274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 18982625 - 18982536
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatg 136  Q
    ||||||||| |||| || || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  18982625 ctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgctaggtttgatg 18982536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 23658142 - 23658050
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||||||||||||| ||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  23658142 ctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 23658050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 20410512 - 20410600
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatg 136  Q
    |||||||||||||  | ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  20410512 taaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaaaaggatttaaccttgtagttgttattagttttgatg 20410600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 29045324 - 29045260
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  29045324 ctaaggtaagggtgagactagctttctctaataatgggttgtataattttgaaaaagggtttaac 29045260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 1819005 - 1818915
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || | |||| ||||||  |||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  1819005 ctaaggtaagggtgagactaaccttctttaatcatgagta-tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgtt 1818915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 34140455 - 34140560
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| |||||   ||||||| ||||||||||||| ||||||||||||| | |||||    
T  34140455 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattttgaaatctggtttaatcttgtagttgttgttagttttgatgttataggaat 34140552  T
Q  147 taggttta 154  Q
    || |||||    
T  34140553 taagttta 34140560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 24506155 - 24506205
Alignment:
Q  88 tataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  24506155 tataattctgaaaaagggtttaattttgtagttgttgatagttttgatgtt 24506205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 10446270 - 10446206
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  10446270 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 10446206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 15890711 - 15890834
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||  | |||||| | ||| || | |  |||||||| |  |||||||||    
T  15890711 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaa-catgttgtaggttgtagttttgttaatttgggaat 15890809  T
Q  147 taggtttagaagttgtaattggttg 171  Q
    ||||||| |||||||||||||||||    
T  15890810 taggttttgaagttgtaattggttg 15890834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 28948537 - 28948477
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| ||| || ||||||    
T  28948537 tttgggaattaggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaatt 28948477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 31734772 - 31734669
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttg 133  Q
    |||||||||| ||||||||||||||| ||||| | || | |||| || |||  | |||||||||||||||||||||||||| ||||||| ||| ||||||    
T  31734772 cgatcgattaacctaaggtaagggtgggactaaccttctttaatcataagta-tgtaattctgaaaaagggtttaaccttgcagttgttaataggttttg 31734674  T
Q  134 atgtt 138  Q
    |||||    
T  31734673 atgtt 31734669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 34153071 - 34153176
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| |||||   | ||||| ||||||||||||| ||||||||||||| | |||||    
T  34153071 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattttgaaatctgttttaatcttgtagttgttgttagttttgatgttataggaat 34153168  T
Q  147 taggttta 154  Q
    || |||||    
T  34153169 taagttta 34153176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 23501634 - 23501588
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtaga 184  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  23501634 tttgggaattaggtttagaagttgtaatttgttgatttaaaagtaga 23501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 7217285 - 7217333
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  7217285 taatcctgaaaaagggtttaaccttgtagttgttaataggtttgatgtt 7217333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 18259140 - 18259192
Alignment:
Q  14 gaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||| |||||    
T  18259140 gaaccaaagaggagaggctgccaatcgattatcctaaggtaagggtgggacta 18259192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 18982422 - 18982379
Alignment:
Q  93 ttctgaaaaagggtttaaccttgtagttgttgatagttttgatg 136  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  18982422 ttctgaaaaagggtttaattttgtagttgttgatagttttgatg 18982379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 16966857 - 16966800
Alignment:
Q  9 gagatgaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    |||| ||| |||||||||  ||||||||||||||||||||||| |||||||| |||||    
T  16966857 gagaagaatcaaagaggagaggctgccgatcgattatcctaagttaagggtgagacta 16966800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 22557259 - 22557210
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  22557259 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 22557210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 25922054 - 25921963
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||||||||||||| ||||| | |||| |||| || |||  | |||| || |||||||||||||||||||||||||| ||| |||||||||||    
T  25922054 ctaaggtaagggtgggactaaccttatttaatcataagta-tgtaatcctaaaaaagggtttaaccttgtagttgttaataggttttgatgtt 25921963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 177
Target Start/End: Complemental strand, 18585764 - 18585729
Alignment:
Q  142 ggaattaggtttagaagttgtaattggttgatttaa 177  Q
    |||||||||||||||||||||||||||||| |||||    
T  18585764 ggaattaggtttagaagttgtaattggttgttttaa 18585729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 13285801 - 13285723
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttga 125  Q
    |||||||||||||| ||||| | || | |||| |||||||  ||||||||||||| ||||||| | |||| ||||||||    
T  13285801 ctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaaaggggtttaccattgttgttgttga 13285723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 19401057 - 19401007
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataat 188  Q
    |||| |||||||||||| |||||||||||| ||||||||| ||||| ||||    
T  19401057 tttgagaattaggtttataagttgtaattgtttgatttaatagtagctaat 19401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 23431488 - 23431609
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataat 188  Q
    |||| ||||||||||||||||||||||||||| | ||| ||||||||||| |  |||||||| || |||  |  ||||| |||    |||||||||||||    
T  23431488 taatcctgaaaaagggtttaaccttgtagttgctaataggttttgatgttgt-agaattagggtttgaaactaaaattgattgtagaaagagtagataat 23431586  T
Q  189 ctgatgaattagggtaataattg 211  Q
    | ||||||||||| | |||||||    
T  23431587 ccgatgaattaggttgataattg 23431609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 7827935 - 7827902
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  7827935 tttgggaattaggttttgaagttgtaattggttg 7827902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 20183791 - 20183754
Alignment:
Q  29 ggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  20183791 ggctgccgatcgattaacctaaggtaagggtgggacta 20183754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 22152200 - 22152237
Alignment:
Q  29 ggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  22152200 ggctgccgatcgattaacctaaggtaagggtgggacta 22152237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 23150376 - 23150409
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  23150376 tttgggaattaggttttgaagttgtaattggttg 23150409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 27330070 - 27330103
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  27330070 tttgggaattaggttttgaagttgtaattggttg 27330103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 27390810 - 27390843
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  27390810 tttgggaattaggttttgaagttgtaattggttg 27390843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 7828024 - 7827972
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 7827972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 12041609 - 12041673
Alignment:
Q  37 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 101  Q
    |||||||| ||||||||||||||| ||||| | || | ||||  | |||||||||||||||||||    
T  12041609 atcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaaa 12041673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 19655231 - 19655283
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  19655231 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 19655283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 23150287 - 23150339
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 23150339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 708428 - 708558
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||| ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| | |||||    
T  708428 ctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgctgttagttttgatgttataggaat 708527  T
Q  147 taggtttagaagttgtaattggttgatttaa 177  Q
    ||||||||||||||||||||||||| |||||    
T  708528 taggtttagaagttgtaattggttgttttaa 708558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 19195664 - 19195558
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||    
T  19195664 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctg-aaaagggtttaaccttgtagttgttgttagttttgatgttataggaat 19195566  T
Q  147 taggttta 154  Q
    ||||||||    
T  19195565 taggttta 19195558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 43745710 - 43745618
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  43745710 cctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttgttgttagttttgatgtt 43745618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 15575648 - 15575757
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||| ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | | |||    
T  15575648 ctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtacttgttgttagttttgatgttatagaaat 15575747  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  15575748 tagggttaga 15575757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 17070384 - 17070459
Alignment:
Q  143 gaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattgatgtcca 218  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  17070384 gaattaggtttagaagttgtaattggttgatttaagtgtagataatctgatgaattagggtaataattggtgtcca 17070459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 8513740 - 8513842
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttg 133  Q
    |||||||||| ||||||||||||||| ||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  8513740 cgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgtttataggttttg 8513839  T
Q  134 atg 136  Q
    |||    
T  8513840 atg 8513842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 20252181 - 20252290
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||| ||||| | | |||    
T  20252181 ctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttattagttttaatgttatagaaat 20252280  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  20252281 taggattaga 20252290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 47095505 - 47095414
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| |||||||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  47095505 ctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaaccttgtagttgttgttaggtttgatgtt 47095414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 8488081 - 8488183
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttg 133  Q
    |||||||||| ||||||||||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||||| |||||||| ||| ||||||    
T  8488081 cgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttatagttgtttataggttttg 8488180  T
Q  134 atg 136  Q
    |||    
T  8488181 atg 8488183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 4690661 - 4690771
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaa 145  Q
    |||||||||| |||| ||||| |||| ||||||  | |||||||||||||||||||||||||||||||||||||||||  || |||||||||| | | ||    
T  4690661 cctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattacttttgatgttatagaaa 4690760  T
Q  146 ttaggtttaga 156  Q
    ||||| |||||    
T  4690761 ttagggttaga 4690771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 18874664 - 18874772
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa--gggtttaaccttgtagttgttgatagttttgatgttttggga 144  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||  |||||||||||||||   |||| ||||||||||||| | | |    
T  18874664 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaaaggggtttaaccttgta---gttggtagttttgatgttatagaa 18874760  T
Q  145 attaggtttaga 156  Q
    |||||| |||||    
T  18874761 attagggttaga 18874772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 38299801 - 38299738
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaa 110  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  38299801 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 43276744 - 43276834
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    ||||||||||||| ||||| |||| |||||||||| |||||||||||||| |||| |||||||||||||||||||| ||| |||||||||||    
T  43276744 taaggtaagggtgggactaactttctctaataatgggttgtataattctg-aaaatggtttaaccttgtagttgttaataggttttgatgtt 43276834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 48212725 - 48212837
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa--gggtttaaccttgtagttgttgatagttttgatgttttggg 143  Q
    |||||||||||||||||||||||||| || ||||||  ||||||| ||||| |||||  ||||||||| ||||| |||||| ||||||||||||| | |     
T  48212725 cctaaggtaagggtgtgactagctttctccaataataggttgtatgattctaaaaaaaggggtttaacattgtaattgttgttagttttgatgttataga 48212824  T
Q  144 aattaggtttaga 156  Q
    ||||||| |||||    
T  48212825 aattagggttaga 48212837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 16250221 - 16250285
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  16250221 ctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaac 16250285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 13132410 - 13132469
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||    
T  13132410 tttgggaattaggtttagaagttgtaatcggttgatttaagagtaga-aatctgttgaatt 13132469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 34958383 - 34958319
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    |||||||||| |||||  ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  34958383 gactagctttctctaaagatgagttgtataattctgaaaaaggatttaacattgtagttgttgat 34958319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 58412 - 58476
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  58412 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 58476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 13315081 - 13315145
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| ||||| |||| |||||||||| ||||||| |||||||||| |||||||||    
T  13315081 ctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaaaggggtttaac 13315145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 15095726 - 15095785
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| |||||| ||||||    
T  15095726 tttgggaattaggtttagaagttgtaattagttgatttaatagtaga-aatctgttgaatt 15095785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 16186928 - 16186857
Alignment:
Q  85 ttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaattaggtttaga 156  Q
    |||||||||||||||||||||||||||||| | ||||||  ||||||||||||| | | ||||||| |||||    
T  16186928 ttgtataattctgaaaaagggtttaaccttatggttgttagtagttttgatgttatagaaattagggttaga 16186857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 3287797 - 3287743
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 101  Q
    |||||||||||||| |||||||||| |||||||||  ||||||||||||||||||    
T  3287797 ctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 15140176 - 15140130
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtaga 184  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||    
T  15140176 tttgggaattaggtttaaaagttgtaattggttgatttaatagtaga 15140130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 42565872 - 42565922
Alignment:
Q  88 tataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  42565872 tataattctgaaaaagggtttaatcttgtagttgttgataattttgttgtt 42565922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 47974807 - 47974948
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttga 134  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||  || ||||| |  || || | |  ||||||||     
T  47974807 cgatcgattaacctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaa-caggtggtaggttgtagttttgg 47974905  T
Q  135 tgttttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
       ||||||||||| |||||||||||||||||||||| |||||    
T  47974906 aaatttgggaattatgtttagaagttgtaattggttgttttaa 47974948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 19283108 - 19283051
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaaggg 105  Q
    ||||||||||||| ||||| |||| ||||| |||| ||||||||||||||||||||||    
T  19283108 taaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaaaaggg 19283051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 13744509 - 13744573
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||| ||| ||||| |||| |||||||||    
T  13744509 ctaaggtaagggtgggactagctttctctaataatgggttttatgattctaaaaaggggtttaac 13744573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 15700887 - 15700951
Alignment:
Q  52 gtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgt 116  Q
    ||||||| | |||||||||| |||||||||||||||||| ||||| |||| ||||||||| ||||    
T  15700887 gtaagggggagactagctttctctaataatgagttgtatgattctaaaaaggggtttaacattgt 15700951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 33002124 - 33002064
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    ||||||||||||| |||||||||||||||||||| | ||| |||||| |||||| ||||||    
T  33002124 tttgggaattagggttagaagttgtaattggttgttgtaatagtagagaatctgttgaatt 33002064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 48807415 - 48807474
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| |||||| ||||||    
T  48807415 tttgggaatttggtacagaagttgtaattggttgatttaagagtaga-aatctgttgaatt 48807474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 8135326 - 8135365
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  8135326 tttgagaattaggtttagaagttgtaattggttgatttaa 8135365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 15700734 - 15700824
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||| ||  ||||||||| |||||||||| |||||||  |||| |||| |||||||| | ||||||||||| ||||||| |||||    
T  15700734 ctaaggtaaggatgatactagctttctctaataatgggttgtatggttctaaaaaggggtttaa-catgtagttgttgttagttttaatgtt 15700824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 25943319 - 25943256
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    ||||||||||||| |||||||||| |||||||||| |||||||  || |||||| |||||||||    
T  25943319 taaggtaagggtgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaac 25943256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 9743120 - 9743169
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgat-agttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| || ||||||||||||    
T  9743120 taatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgtt 9743169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 831864 - 831928
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    |||||| ||| |||||  ||| |||||| |||||| |||||||||||||| ||||||||||||||    
T  831864 gactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttgat 831928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 1197044 - 1197108
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    |||||| ||| |||||  ||| |||||| |||||| |||||||||||||| ||||||||||||||    
T  1197044 gactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttgat 1197108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 8930764 - 8930828
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||  ||| |||||||||| ||||||| ||||| |||| |||||||||    
T  8930764 ctaaggtaagggtgggactacatttctctaataatgggttgtatgattctaaaaaggggtttaac 8930828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 12127162 - 12127285
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||  | |||||| | ||| || | |  ||||| ||    |||||||||    
T  12127162 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaa-catgttgtaggttttagttatggaaatttgggaat 12127260  T
Q  147 taggtttagaagttgtaattggttg 171  Q
    ||||||| |||||||||||||||||    
T  12127261 taggttttgaagttgtaattggttg 12127285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 13698728 - 13698764
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatt 174  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13698728 tttgggaattagggttagaagttgtaattggttgatt 13698764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 18570700 - 18570636
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||  |||||  ||| |||||||||    
T  18570700 ctaaggtaagggtgagactagctttctctaataatgggttgtaagattctagaaaggggtttaac 18570636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 21661309 - 21661218
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttt 139  Q
    |||||||||||||| ||||| | || | ||||| |||||| ||||||||||||||||||  |||| |||  |||||||||| || ||||||||    
T  21661309 ctaaggtaagggtgggactaaccttctttaata-tgagttatataattctgaaaaaggggctaactttgatgttgttgataattgtgatgttt 21661218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 15119354 - 15119397
Alignment:
Q  96 tgaaaaagggtttaaccttgtagttgttgatag-ttttgatgtt 138  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  15119354 tgaaaaagggtttaaccttgtagttgttaatagattttgatgtt 15119397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 14274294 - 14274256
Alignment:
Q  139 ttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  14274294 ttgggaattaggtttagaagttgtaatttgttgttttaa 14274256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 20214209 - 20214147
Alignment:
Q  38 tcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||  |||||||||||||| ||||| |||| || |||  ||||||||||||||||||||    
T  20214209 tcgattaatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaa 20214147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 33060491 - 33060402
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgt 137  Q
    |||||||||||||| ||||| | || | |||| ||||||  |||||||||| ||||||||||||  |||| |||||| ||| |||||||||    
T  33060491 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattctggaaaagggtttaattttgttgttgtttataattttgatgt 33060402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 12465349 - 12465382
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  12465349 tttgggaattaggttttgaagttgtaattggttg 12465382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 13147561 - 13147594
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  13147561 tttgggaattaggttttgaagttgtaattggttg 13147594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 14160897 - 14160946
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| ||||||| ||||||||||||||||||||| ||| |||||||||||    
T  14160897 taatcctgaaaaggggtttaaccttgtagttgttaataggttttgatgtt 14160946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 14180397 - 14180450
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||||||||||  ||| ||||||  | ||||||||||||||||||    
T  14180397 ctaaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaa 14180450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 14318083 - 14318034
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| ||||||||||||||||||||| ||||||| ||| |||||||||||    
T  14318083 taatcctgaaaaagggtttaaccttgcagttgttaataggttttgatgtt 14318034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 20586405 - 20586352
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  20586405 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 20586352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 20620249 - 20620216
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  20620249 tttgggaattaggttttgaagttgtaattggttg 20620216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 8851159 - 8851211
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  8851159 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 8851211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 11067520 - 11067468
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  11067520 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 11067468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 12372326 - 12372274
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12372274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 12465260 - 12465312
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12465312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 32433589 - 32433641
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  32433589 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 32433641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 35771430 - 35771494
Alignment:
Q  37 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 101  Q
    |||||||| ||||||||||||||| ||||| |||| ||||||  | |||  ||||||||||||||    
T  35771430 atcgattaacctaaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaa 35771494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 36732410 - 36732518
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaa 145  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||||    
T  36732410 cctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttataggaa 36732509  T
Q  146 ttaggttta 154  Q
    |||||||||    
T  36732510 ttaggttta 36732518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 18816295 - 18816403
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaatt 147  Q
    ||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | | ||||    
T  18816295 taaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 18816394  T
Q  148 aggtttaga 156  Q
    ||| |||||    
T  18816395 agggttaga 18816403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 156
Target Start/End: Complemental strand, 21514743 - 21514635
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaatt 147  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| | | ||||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 21514644  T
Q  148 aggtttaga 156  Q
    ||| |||||    
T  21514643 agggttaga 21514635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 22208322 - 22208230
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  22208322 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 22208230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 4380615 - 4380725
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaa 145  Q
    ||||||||||||||| ||||| |||| ||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | | ||    
T  4380615 cctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 4380714  T
Q  146 ttaggtttaga 156  Q
    ||||| |||||    
T  4380715 ttagggttaga 4380725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 22258306 - 22258397
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||    
T  22258306 taaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaagggtttaaccttgcagttgttgataggttttgatgtt 22258397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 12577932 - 12577841
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaacc-ttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| |||| ||||||||| ||||||||||||| |||||||||||||||| || ||||||||| |||||||||||||    
T  12577932 ctaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaaaagggtttaacctttatagttgttgttagttttgatgtt 12577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 21676592 - 21676697
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| || | | |||    
T  21676592 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagaaat 21676689  T
Q  147 taggttta 154  Q
    ||||||||    
T  21676690 taggttta 21676697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 20022120 - 20022181
Alignment:
Q  136 gttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  20022120 gttttgggaattaggtttagaagttgtaattggttgatttaagagtgga-aatctgatgaatt 20022181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 21678845 - 21678949
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| || | | |||    
T  21678845 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagcaat 21678942  T
Q  147 taggttt 153  Q
    |||||||    
T  21678943 taggttt 21678949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 21676499 - 21676585
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgat 135  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  21676499 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgat 21676585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 22483834 - 22483775
Alignment:
Q  52 gtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 18023570 - 18023634
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  18023570 gactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttgat 18023634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 45469309 - 45469368
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  45469309 tttgggaattatgtttagaagttgtaattggttgatttaagagtaga-aatttgatgaatt 45469368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 21399770 - 21399706
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  21399770 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 21399706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 21794263 - 21794199
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  21794263 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 21794199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 22345217 - 22345153
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| |||| ||||| |||||||||    
T  22345217 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaac 22345153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 22356877 - 22356813
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| |||| ||||| |||||||||    
T  22356877 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaac 22356813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 22610266 - 22610330
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| ||||| |||| |||||||||||||||||| ||||| |||| |||||||||    
T  22610266 ctaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaac 22610330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 31722583 - 31722642
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  31722583 tttggaaatttggtttagaagttgtaattggttgatttaagagtaga-aatctgttgaatt 31722642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 38184926 - 38184990
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| |||||||| |||||    
T  38184926 gactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttattgat 38184990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 22474767 - 22474646
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataat 188  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||||||||| |  |||||||| || |||  |  ||||| |||    |||||||||||||    
T  22474767 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgt-agaattagggtttgaaactaaaattgattgtcgaaagagtagataat 22474669  T
Q  189 ctgatgaattagggtaataattg 211  Q
    ||||||||||||| | |||||||    
T  22474668 ctgatgaattaggttgataattg 22474646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 22483976 - 22483914
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    ||||| |||| |||||||||||||||||||||||| |||||||||||||| | || |||||||    
T  22483976 gactaactttctctaataatgagttgtataattcttaaaaagggtttaacatggttgttgttg 22483914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 21579206 - 21579368
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgttttgggaat 146  Q
    ||||||||||||||||||| | || | |||| || |||  | |||| ||||||||||||||||||||||||||||| ||| ||||||||||| |  ||||    
T  21579206 taaggtaagggtgtgactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgttaatatgttttgatgttgt-agaat 21579303  T
Q  147 taggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattg 211  Q
    |||| || |||  |  ||||| |||    |||||||||||||| ||||||||||| | |||||||    
T  21579304 tagggttcgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattg 21579368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 36306050 - 36305988
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaa 110  Q
    |||||||||||||| |||||||||| |||||||| | ||||||| ||||||||||||| |||||    
T  36306050 ctaaggtaagggtgagactagctttctctaataacg-gttgtatgattctgaaaaaggttttaa 36305988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 12037205 - 12037326
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgatag-ttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataat 188  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||| |  |||| ||| || |||  |  ||||| |||    |||||||||||||    
T  12037205 taatcctgaaaaagggtttaaccttgtagttgttaatagcttttgatgttgt-agaatcagggtttgaaactaaaattgattgtagaaagagtagataat 12037303  T
Q  189 ctgatgaattagggtaataattg 211  Q
    | ||||||||||| |||||||||    
T  12037304 ccgatgaattaggttaataattg 12037326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 17906815 - 17906901
Alignment:
Q  14 gaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||   |||  |||||||||| ||||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||    
T  17906815 gaaccaaagaggagaagctttcgatcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 17906901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 22318000 - 22318046
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtaga 184  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  22318000 tttgggatttaggtttagaagttgtaattggttggtttaatagtaga 22318046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 29762909 - 29762958
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgat-agttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| || ||||||||||||    
T  29762909 taatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgtt 29762958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 39694266 - 39694426
Alignment:
Q  37 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgatagttttga 134  Q
    ||||| || ||||| ||||||| |||||||||||| |||||| || |||||||| |||||||||  || ||||||   ||||||  |||| ||||||||     
T  39694266 atcgactaacctaatgtaagggcgtgactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtag--gttg-tagttttgg 39694362  T
Q  135 tgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
       ||||||||||||| ||||| ||||||||| ||||   ||| |||||| |||||| ||||||    
T  39694363 gaatttgggaattagggttagacgttgtaattagttgtcgtaatagtagagaatctgttgaatt 39694426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 18834474 - 18834412
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    ||||||||||||| |||||||||| ||||||||||  |||||| ||||| |||| |||||||||    
T  18834474 taaggtaagggtgggactagctttctctaataatggattgtatgattct-aaaaggggtttaac 18834412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 20083638 - 20083760
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaatt 147  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||  | ||||| | | || || | |  ||||| |||   ||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcat-gttgtaggttgtagttatgagaatttgggaatt 20083736  T
Q  148 aggtttagaagttgtaattggttg 171  Q
    |||||| |||||||||||||||||    
T  20083737 aggttttgaagttgtaattggttg 20083760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 22532222 - 22532281
Alignment:
Q  139 ttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||||||| |||||||||||| ||| ||||| |||||| ||| || ||||||    
T  22532222 ttgggaattaggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaatt 22532281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 22536907 - 22536966
Alignment:
Q  139 ttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||||||| |||||||||||| ||| ||||| |||||| ||| || ||||||    
T  22536907 ttgggaattaggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaatt 22536966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 22966815 - 22966772
Alignment:
Q  96 tgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  22966815 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 22966772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 5082301 - 5082334
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  5082301 tttgggaattaggttttgaagttgtaattggttg 5082334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 17978457 - 17978506
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| |||||||||| |||||||||||||||||| ||| |||||||||||    
T  17978457 taatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgtt 17978506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 19140728 - 19140695
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  19140728 tttgggaattaggttttgaagttgtaattggttg 19140695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 41680174 - 41680223
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| |||| |||||||||||||||||||||||| ||| |||||||||||    
T  41680174 taatcctgataaagggtttaaccttgtagttgttaataggttttgatgtt 41680223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 2934 - 2827
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | |||||    
T  2934 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagtttcgatgttataggaat 2835  T
Q  147 taggttta 154  Q
    ||||||||    
T  2834 taggttta 2827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 2073 - 1964
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | | |||    
T  2073 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 1974  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  1973 tagggttaga 1964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 186195 - 186304
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | | |||    
T  186195 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 186294  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  186295 tagggttaga 186304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 16063804 - 16063697
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| | |||||    
T  16063804 ctaaggtaagggtgggactacctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttataggaat 16063705  T
Q  147 taggttta 154  Q
    ||||||||    
T  16063704 taggttta 16063697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 18744927 - 18744818
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| | | |||    
T  18744927 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 18744828  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  18744827 tagggttaga 18744818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 23199207 - 23199315
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaatt 147  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| | | ||||    
T  23199207 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaaccttgtagttgttagtagttttgatgttatagaaatt 23199306  T
Q  148 aggtttaga 156  Q
    ||| |||||    
T  23199307 agggttaga 23199315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 6551289 - 6551396
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| |||| ||||||  | |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| | |||||    
T  6551289 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagatttgatgttataggaat 6551388  T
Q  147 taggttta 154  Q
    ||||||||    
T  6551389 taggttta 6551396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 660842 - 660752
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||| | |||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  660842 cctaaggtaaggggg-gactagctttctctaataaggggttgtataattctgaaaaagg-tttaaccttgtagttgttgttagttttgatgtt 660752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 1627071 - 1627176
Alignment:
Q  52 gtaagggtgtgactagctttatctaataatgagttgtataattct-gaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaattagg 150  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||| ||||||| || ||| ||||||||||||| | | |||||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattctaaaaaaagggtttacccttgtatttattgttagttttgatgttatagaaattagg 1627170  T
Q  151 tttaga 156  Q
     |||||    
T  1627171 gttaga 1627176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 26762467 - 26762364
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttg 133  Q
    |||||||||| ||||||||||||||| ||||| | || | |||| || | || | |||| ||||||||||||||||||||||||||||| ||| ||||||    
T  26762467 cgatcgattaacctaaggtaagggtgggactaaccttctttaatcataa-ttatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttg 26762369  T
Q  134 atgtt 138  Q
    |||||    
T  26762368 atgtt 26762364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 32607315 - 32607379
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  32607315 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 32607379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 1626916 - 1627008
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    ||||||||||||||||||||| | || | |||| || |||  | |||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  1626916 cctaaggtaagggtgtgactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 1627008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 21914458 - 21914510
Alignment:
Q  14 gaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||| |||||    
T  21914458 gaaccaaagaggagaggctgccgatcgattaacctaaggtaagggtgggacta 21914510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 30138064 - 30138102
Alignment:
Q  139 ttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  30138064 ttgggaattaggtttagaagttgtaattggttgttttaa 30138102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 14025848 - 14025897
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgatag-ttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  14025848 taatcctgaaaaagggtttaaccttgtagttgttaatagattttgatgtt 14025897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 17876166 - 17876133
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    ||||||||||||||||||||||||||||||||||    
T  17876166 tttgggaattaggtttagaagttgtaattggttg 17876133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 26750085 - 26749993
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat-agttttgatgtt 138  Q
    ||||||||||||||| ||||| | || | |||| || |||  |||||| ||||||| ||||||||||||||||||||| || ||||||||||||    
T  26750085 cctaaggtaagggtgagactaaccttttttaatcataagta-tataatcctgaaaaggggtttaaccttgtagttgttaataagttttgatgtt 26749993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 36508633 - 36508761
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaatt 147  Q
    ||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||| || ||||||   || || | |  ||||||||    ||||||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacag-gtggtaggttgtagttttggaaatttgggaatt 36508731  T
Q  148 aggtttagaagttgtaattggttgatttaa 177  Q
    | |||||||||||||||||||||| |||||    
T  36508732 atgtttagaagttgtaattggttgttttaa 36508761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 24068234 - 24068191
Alignment:
Q  96 tgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  24068234 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 24068191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 31456923 - 31456884
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  31456923 tttggaaattaggtttagaagttgtaattggttgttttaa 31456884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 8833247 - 8833368
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataat 188  Q
    |||| |||||||||||||||||||| |||||||| ||| ||||||||||| |  |||||||| || |||  |  ||||| | |    |||||||||||||    
T  8833247 taatcctgaaaaagggtttaaccttatagttgttaataggttttgatgttgt-agaattagggtttgaaactaaaattgatcgtagaaagagtagataat 8833345  T
Q  189 ctgatgaattagggtaataattg 211  Q
    ||||||||||||| | |||||||    
T  8833346 ctgatgaattaggttgataattg 8833368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 21398643 - 21398697
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 101  Q
    |||||||||||||| || ||||||| |||||||||| ||||||| ||||| ||||    
T  21398643 ctaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaa 21398697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 20313328 - 20313253
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    |||||||||||||| |||||||||  ||||||| || ||| ||||||||||||| |||||||||| | || |||||||    
T  20313328 ctaaggtaagggtgggactagcttc-tctaatagtgggtt-tataattctgaaatagggtttaacatggttgttgttg 20313253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 21300043 - 21300096
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  21300043 ctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaa 21300096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 21504147 - 21504102
Alignment:
Q  93 ttctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||||||  |||||||||||  |||||||||||||    
T  21504147 ttctgaaaaagggtttaagtttgtagttgttagtagttttgatgtt 21504102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 18329 - 18219
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaa 145  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||| || | | ||    
T  18329 cctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttggttttgattttatagaaa 18230  T
Q  146 ttaggtttaga 156  Q
    ||||| |||||    
T  18229 ttagggttaga 18219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 3421 - 3512
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  3421 ctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtt 3512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 21315475 - 21315566
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  21315475 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgtt 21315566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 21335265 - 21335356
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  21335265 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgtt 21335356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 23610680 - 23610570
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaa 145  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||||||| ||||||||| | ||||||||||| | | ||    
T  23610680 cctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttctagttgttgtttgttttgatgttatagaaa 23610581  T
Q  146 ttaggtttaga 156  Q
    ||||| |||||    
T  23610580 ttagggttaga 23610570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 21369346 - 21369237
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||  |  ||||||||||||| | | |||    
T  21369346 ctaaggtaagggtgggacaagctttctctaacaatgggttgtataattctgaaaaagggtttaaccttgtagtttatattagttttgatgttatagaaat 21369247  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  21369246 tagggttaga 21369237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 149500 - 149668
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa---gggtttaac--cttgtagttgttgatagttttgatgttttg 141  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||| |||||   |||||||||   |||| ||| ||| ||||||||||||| |     
T  149500 ctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaaaaggggtttaacatgttgtcgtt-ttgttagttttgatgttata 149598  T
Q  142 ggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattg 211  Q
    | ||||||| || ||| ||  ||||| ||| |  |||||||| ||||| ||||||||| |||||||||||    
T  149599 gaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatgaattaaggtaataattg 149668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 3539799 - 3539753
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtaga 184  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  3539799 tttgagaattaggtttagaagttgtaattggttgatttaagagtaga 3539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 25584302 - 25584352
Alignment:
Q  88 tataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  25584302 tataattctgaaaaagggtttaaccttgtcgttgatgatagttttgatgtt 25584352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 25142166 - 25142121
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtag 183  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  25142166 tttgggaattaggtttagaagttgtaattggttgaattaagagtag 25142121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 23801549 - 23801485
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  23801549 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 23801485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 19647246 - 19647199
Alignment:
Q  88 tataattctgaaaaagggtttaaccttgtagttgttgatagttttgat 135  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  19647246 tataattctgaaaaagggtttaatcttgtagttgttaatagttttgat 19647199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 20005970 - 20006060
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||||| || | |||| ||||||  |||||||||||||||||||||||  |||| |||||| ||| ||||||||||    
T  20005970 ctaaggtaagggtgggactagccttctttaatcatgagtc-tataattctgaaaaagggtttaattttgttgttgttaataattttgatgtt 20006060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 28652593 - 28652717
Alignment:
Q  90 taattctgaaaaagggtttaacctt-gtagttgttgatagttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataat 188  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||| | | ||||||| |||||  ||| | ||  ||| |  |||||||| ||||    
T  28652593 taattctgaaaaagggtttagcctttgtagttgttgttagttttgatgttatagaaattagggttaga--ttgaatttaattgttaaaagagtaggtaat 28652690  T
Q  189 ctgatgaattagggtaataattgatgt 215  Q
    |  |||||||| |||||||||||||||    
T  28652691 ccaatgaattaaggtaataattgatgt 28652717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 34491239 - 34491316
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaa-taatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    |||||||||||||| |||||||||  ||||| ||| |||||||||||||||||||||||||||||| | || |||||||    
T  34491239 ctaaggtaagggtgggactagcttc-tctaaataacgagttgtataattctgaaaaagggtttaacatggttgttgttg 34491316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 28344987 - 28345051
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    ||||| ||||||||||||||||||| |||||||||| | ||||| ||||| |||| |||||||||    
T  28344987 ctaagataagggtgtgactagctttctctaataatgggctgtatgattctaaaaaggggtttaac 28345051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 357844 - 357805
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  357844 tttgggaattaggtttagaagttgtaattggttgttttaa 357805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 1383632 - 1383671
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  1383632 tttgggaattaggtttagaagttgtaattggttgttttaa 1383671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 19201289 - 19201355
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggta 204  Q
    |||||||||||||||| ||||||||||||||||| |   |||||||| |||||| |||||| |||||    
T  19201289 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggta 19201355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 24884433 - 24884400
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    ||||||||||||||||||||||||||||||||||    
T  24884433 tttgggaattaggtttagaagttgtaattggttg 24884400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 27852630 - 27852570
Alignment:
Q  138 tttgggaattaggtttagaagttgta-attggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||||| |||||| ||||||    
T  27852630 tttgggaattagatttagaagttgtagattggtggatttaagagtaga-aatctgttgaatt 27852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 22251537 - 22251597
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||||||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  22251537 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatt 22251597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 24516239 - 24516116
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||  | ||||||| | || || | |  ||||| ||    |||||||||    
T  24516239 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacat-gttgtaggttgtagttatgggaatttgggaat 24516141  T
Q  147 taggtttagaagttgtaattggttg 171  Q
    ||||||| |||||||||||||||||    
T  24516140 taggttttgaagttgtaattggttg 24516116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 45535978 - 45535899
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata 127  Q
    |||||||||||||| ||||| | || | |||| | ||||  ||||||||||||||||||||||| ||||| ||||||||||    
T  45535978 ctaaggtaagggtgggactaaccttctttaatcacgagtc-tataattctgaaaaagggtttaatcttgttgttgttgata 45535899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 5031218 - 5031251
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  5031218 tttgggaattaggttttgaagttgtaattggttg 5031251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 9975892 - 9975859
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  9975892 tttgggaattaggttttgaagttgtaattggttg 9975859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 17307449 - 17307416
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  17307449 tttgggaattaggttttgaagttgtaattggttg 17307416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 17307539 - 17307486
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  17307539 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 24780929 - 24780962
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  24780929 tttgggaattaggttttgaagttgtaattggttg 24780962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 40912373 - 40912320
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  40912373 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40912320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 5031129 - 5031181
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 5031181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 24780840 - 24780892
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 16418 - 16584
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttg-ggaa 145  Q
    |||||||||||||| || || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || | | ||    
T  16418 ctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaa 16517  T
Q  146 ttaggtttagaagttgtaattg-gttgatttaagagtagataatctgatgaattagggtaataattg 211  Q
    ||||| |||||  ||  |||||  ||| |  |||||||| |||| ||||||||||||||||||||||    
T  16518 ttagggttagagattaaaattgatttgttgaaagagtaggtaatatgatgaattagggtaataattg 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 18700 - 18777
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    ||||||| |||||| || || |||| |||||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  18700 ctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaaacggtttagccttgtagttgttg 18777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 18902 - 18945
Alignment:
Q  93 ttctgaaaaagggtttaaccttgtagttgttgatagttttgatg 136  Q
    |||||||||| |||||||  ||||||||||||||||||||||||    
T  18902 ttctgaaaaaaggtttaattttgtagttgttgatagttttgatg 18945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 1128 - 1036
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtttt 140  Q
    ||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaaccttgtagatgttgttagttttgatgtttt 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 14585 - 14674
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatg 136  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  14585 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatg 14674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 23643 - 23732
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatg 136  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  23643 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatg 23732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 17520 - 17611
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||  |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  17520 ctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgctgtt 17611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 17939 - 18048
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| |||| ||||||  | |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| | | |||    
T  17939 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttatagaaat 18038  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  18039 tagggttaga 18048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 4988 - 4898
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaacc-ttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||    
T  4988 taaggtaagggtgggactagctttctctaataatg-gttgtataattctgtaaaagggtttaacctttgtagttgttgttagttttgatgtt 4898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 2198 - 2287
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgat 135  Q
    ||||||||||||||| |||||  ||| ||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2198 cctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 2287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 5303 - 5395
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||| ||||| |||| ||||||  | |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  5303 cctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaaccttgtagttgttgttcgttttgatgtt 5395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 657 - 748
Alignment:
Q  9 gagatgaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  657 gagaagaaccaaagaggaagggctgccgatcaattatcctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaa 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 2454 - 2564
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctg--aaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaa 145  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||  ||||| |||||||||||||||| |||  ||||||||||||| | | ||    
T  2454 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaatggtttaaccttgtagtcgttattagttttgatgttatagaaa 2553  T
Q  146 ttaggtttaga 156  Q
    ||||| |||||    
T  2554 ttagggttaga 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 19260 - 19169
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||| ||||||||| ||||| |||| ||||||  | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  19260 ctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgtt 19169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 19160 - 19123
Alignment:
Q  101 aagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19160 aagggtttaaccttgtagttgttgatagttttgatgtt 19123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 56; Significance: 2e-23; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 168960 - 169051
Alignment:
Q  9 gagatgaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  168960 gagaagaaccaaagaggaagggctgccgatcaattatcctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaa 169051  T

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Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 174286 - 174183
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttg 133  Q
    |||||||||| ||||| ||||||||| ||||| | || | |||| || |||  | |||| ||||||||||||||||||||||||||||| ||| ||||||    
T  174286 cgatcgattaacctaaagtaagggtgggactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttg 174188  T
Q  134 atgtt 138  Q
    |||||    
T  174187 atgtt 174183  T

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Target: scaffold0020; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 143663 - 143611
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||||||||| |||| ||||||  | ||||||||||||||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 143611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 5685 - 5592
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctga--aaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||||  ||||||||||||| ||||||||||| ||| |||||||||||    
T  5685 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttttgatgtt 5592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 15615 - 15723
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| |||  ||||||||||  |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| | | |||    
T  15615 ctaaggtaagggtgggactaacttc-tctaataatggtttgtatgattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 15713  T
Q  147 taggtttaga 156  Q
    |||| |||||    
T  15714 tagggttaga 15723  T

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Target: scaffold0108 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 6471 - 6390
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatag 128  Q
    |||||||||||||  |||||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||    
T  6471 ctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaaaagggattaatcttgtagttgtttatag 6390  T

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Target: scaffold0032 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 61847 - 61937
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  61847 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa-ggatttaaccttgtagttgttgttagttttgatgtt 61937  T

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Target: scaffold0032; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 68388 - 68331
Alignment:
Q  9 gagatgaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  68388 gagaagaaccaaagaggaagggctgtcgatcgattatcttaaggtaagggtgggacta 68331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 5507 - 5445
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggttta 109  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  5507 ctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 11668 - 11592
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    |||| |||||||| |||||  ||| ||||| |||| |||||||||||||||||||||||||||| | || |||||||    
T  11668 taagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaacatcgttgttgttg 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 19909 - 19845
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||  |||||| ||| |||||||||| ||||||| ||||| |||| |||||||||    
T  19909 ctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaac 19845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 11353 - 11320
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  11353 tttgggaattaggttttgaagttgtaattggttg 11320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 2300 - 2223
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    |||||||||||||| |||||||||| | |||||||| |||||||||||||||||||||||||||| | || |||||||    
T  2300 ctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaacatagttgttgttg 2223  T

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Target: scaffold0092 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 38441 - 38531
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||||||||| | || | |||| ||||||  |||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  38441 ctaaggtaagggtgtgactaaccttctttaatcatgagta-tataattctgaaaaagggtttaattttgtagttgttaatagttttgatgtt 38531  T

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Target: scaffold0058 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 59655 - 59761
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| | ||| | || | |||| ||||||  |||||||||||||||||||||||| ||||||||||||||||||||||| || | | |||    
T  59655 ctaaggtaagggtgggtctaaccttctttaatcatgagta-tataattctgaaaaagggtttaactttgtagttgttgatagttttgatattatagaaat 59753  T
Q  147 taggttta 154  Q
    ||||||||    
T  59754 taggttta 59761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 22465 - 22519
Alignment:
Q  14 gaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagc 68  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  22465 gaaccaaagaggaagggctgccgatcgattattctaaggtaagggtgagactagc 22519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 40160 - 40253
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagt-tgta-taattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || |||||| |||||| | || ||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  40160 ctaaggtaagggtgggactaaccttctctaatcatgagtatataataattctaaaaaagggtttaaccatgtagttgttgatagttttgatgtt 40253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 23587 - 23503
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttt 131  Q
    |||||||||||||  |||||||||| |||||||||| ||||||||| ||| |||| ||||| ||||||| |||||||| ||||||    
T  23587 ctaaggtaagggtaggactagctttctctaataatgggttgtataaatctaaaaaggggttaaaccttgcagttgttgttagttt 23503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 66071 - 66148
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    |||||||||||||| |||||| ||| | |||||||| |||||||||||||||||||||||||||| | || |||||||    
T  66071 ctaaggtaagggtgggactagatttctttaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 66148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 111425 - 111344
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgt 116  Q
    ||||||||||  |||||||||||||| | |||||||| |||||||||| ||||||| ||||| |||| ||||||||| ||||    
T  111425 cgatcgattaatctaaggtaagggtggggctagctttctctaataatgggttgtatgattctaaaaaggggtttaacattgt 111344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 73139 - 73076
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||| |||| |||||||||    
T  73139 taaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaac 73076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 75990 - 75926
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| || ||||||| ||||||| ||||| |||| |||||||||    
T  75990 ctaaggtaagggtgggactagctttctccaataatgggttgtatgattctaaaaaggggtttaac 75926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 328379 - 328412
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  328379 tttgggaattaggtttcgaagttgtaattggttg 328412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 423 - 359
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  423 gactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttgat 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 3257 - 3167
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  3257 ctaaggtaagggtgggactaaccttctttaatcatgagta-tataattatgaaaaagggtttaattttgtagttgttgatagttttgatgtt 3167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 211
Target Start/End: Complemental strand, 8897 - 8731
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttg--ttgatagttttgatgttttggga 144  Q
    ||||| |||||||| |||||||||||||||||||||  |||||| |||||||||| ||| || | | ||| ||||  ||| || ||||||| |||  | |    
T  8897 ctaagttaagggtgggactagctttatctaataatggattgtatgattctgaaaagggggtttaacatgttgttgttttgttaattttgatttttgagaa 8798  T
Q  145 attaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattg 211  Q
    ||||||||| ||| ||  ||||| ||| |  |||||||| ||||| ||||||||| |||||||||||    
T  8797 attaggttttgaaattaaaattgattgttgaaagagtaggtaatcagatgaattaaggtaataattg 8731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 26776 - 26689
Alignment:
Q  51 ggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||| || || |||| ||||||  |  |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattctgaaaaagggtttaactttgtagttgttgttagctttgatgtt 26689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 23666 - 23576
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||  | || | |||| ||||||  ||||||||| |||||||||||||  ||||||||||| ||||||||||||||    
T  23666 ctaaggtaagggtgggactgaccttctttaatcatgagta-tataattctaaaaaagggtttaattttgtagttgttaatagttttgatgtt 23576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 35185 - 35262
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    ||||||||||||||  |||||||||  ||||||||| ||||||||||||| |||||||||||||| | || |||||||    
T  35185 ctaaggtaagggtggtactagctttccctaataatgggttgtataattctaaaaaagggtttaacatggttgttgttg 35262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 10633 - 10570
Alignment:
Q  62 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgat 126  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  10633 gactagctttctctaaagatg-gttgtataattctgaaaaagggtttaacattgtagttgttgat 10570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 7513 - 7603
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||| |||||||||||||||||||  || |||||||||||||||||||||||    
T  7513 ctaaggtaagggtgggactaaccttctttaattatgagta-tatgattctgaaaaagggtttaattttatagttgttgatagttttgatgtt 7603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 20174 - 20235
Alignment:
Q  138 tttgggaattaggtttagaagttgtaa-ttggttgatttaagagtagataatctgatgaatta 199  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  20174 tttgggaattatgtttagaagttgtaatttggttgatttaagagtaga-aatctgttgaatta 20235  T

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Target: scaffold0338 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 10723 - 10780
Alignment:
Q  9 gagatgaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    |||| |||||||||||||  ||| |||||||||||||||||||||||||||| |||||    
T  10723 gagaagaaccaaagaggagaggccgccgatcgattatcctaaggtaagggtgggacta 10780  T

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Target: scaffold0338; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 199 - 161
Alignment:
Q  139 ttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  199 ttggaaattaggtttagaagttgtaattggttgttttaa 161  T

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Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 117889 - 117941
Alignment:
Q  137 ttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatct 190  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  117889 ttttgggaattaggtttagaagttgtaattggttg-tttaacagtagaaaatct 117941  T

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Target: scaffold0037; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 113057 - 113116
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| ||| || ||||||    
T  113057 tttgggaattaggtttagaagttgtaattggttg-tttaacagtagaaaatttgttgaatt 113116  T

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Target: scaffold0037; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 81530 - 81501
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattg 167  Q
    ||||||||||||||||||||||||||||||    
T  81530 tttgggaattaggtttagaagttgtaattg 81501  T

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Target: scaffold0628 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 1148 - 1207
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  1148 tttgggatttagggttagaagttgtaattagttgatttaagagtaga-aatctgttgaatt 1207  T

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Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 10433 - 10536
Alignment:
Q  35 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttg 133  Q
    |||||||||| ||||||||||||||| ||||| | || | |||| || |||  | |||| ||||||||||||||||| ||||||||||| ||| ||||||    
T  10433 cgatcgattaacctaaggtaagggtgggactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaacattgtagttgttaataggttttg 10531  T
Q  134 atgtt 138  Q
    |||||    
T  10532 atgtt 10536  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 127342 - 127406
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| |||||||||| ||||||||||  |||||| ||||| |||| |||||||||    
T  127342 ctaaggtaagggtgggactagctttctctaataatggattgtatgattctaaaaaggggtttaac 127406  T

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Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 108255 - 108208
Alignment:
Q  138 tttgggaattaggtttagaagtt-gtaattggttgatttaagagtaga 184  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  108255 tttgggaattaggtttagaagttggaaattggttgatttaagagtaga 108208  T

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Target: scaffold0379 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 10999 - 10937
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||  ||||||||| |||||||||| ||||||| ||||| ||||||||||||||    
T  10999 taaggtaagggtggaactagctttctctaataatgggttgtatgattct-aaaaagggtttaac 10937  T

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Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 28564 - 28513
Alignment:
Q  88 tataattctgaaaaagggtttaacc-ttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  28564 tataattctgaaaaagggtttaacctttgtagttgttgttagtttttatgtt 28513  T

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Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 17118 - 17075
Alignment:
Q  88 tataattctgaaaaagggtttaaccttgtagttgttgatagttt 131  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  17118 tataattcttaaaaagggtttaactttgtagttgttgatagttt 17075  T

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Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 26649 - 26606
Alignment:
Q  88 tataattctgaaaaagggtttaaccttgtagttgttgatagttt 131  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  26649 tataattcttaaaaagggtttaactttgtagttgttgatagttt 26606  T

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Target: scaffold0848 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 2110 - 2160
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataat 188  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||| ||||    
T  2110 tttgggaattaggtttataagttgtaattggttggtttaatagtagctaat 2160  T

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Target: scaffold0555 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 8745 - 8811
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaacct 113  Q
    |||||||||||||| |||||||||  |||||||||| ||||||| ||||| |||| ||||| |||||    
T  8745 ctaaggtaagggtgagactagcttactctaataatgggttgtatgattctaaaaaggggttgaacct 8811  T

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Target: scaffold0217 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 28726 - 28664
Alignment:
Q  88 tataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaattagg 150  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||  |||| | |||||||||    
T  28726 tataattctgaaaaagcgtttaatcttgtagttgttaatagttttattgttataggaattagg 28664  T

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Target: scaffold0175 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 8598 - 8545
Alignment:
Q  144 aattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||||| ||||||    
T  8598 aattagggttagaagttgtaattggttgatttaatagtaga-aatctgttgaatt 8545  T

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Target: scaffold0162 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 23932 - 23990
Alignment:
Q  98 aaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaattaggtttaga 156  Q
    ||||||||||||||||||||||||||  ||||||||||||| | | ||||||| |||||    
T  23932 aaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattagggttaga 23990  T

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Target: scaffold0385 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 356 - 307
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  356 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 307  T

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Target: scaffold1941 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 191 - 68
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgttttgggaat 146  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||  | ||||||| | || || | |  ||||| ||    |||||||||    
T  191 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacat-gttgtaggttgtagttatgggaatttgggaat 93  T
Q  147 taggtttagaagttgtaattggttg 171  Q
    ||||||| |||||||||||||||||    
T  92 taggttttgaagttgtaattggttg 68  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 208
Target Start/End: Complemental strand, 20199 - 20092
Alignment:
Q  101 aagggtttaaccttgtagttgttgata-gttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatta 199  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||||| || ||| ||  ||||| |||    |||| ||||||||| |||||||||    
T  20199 aagggtttaaccttgtagttgttaataggttttgatgtttt-agaattagggtttgaaattaaaattgattgtagaaagaatagataatccgatgaatta 20101  T
Q  200 gggtaataa 208  Q
    || ||||||    
T  20100 ggttaataa 20092  T

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Target: scaffold0098 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 40160 - 40096
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    ||||||||||| || ||||| |||| |||||||||| ||||||| ||||| |||| |||||||||    
T  40160 ctaaggtaaggatgcgactaactttctctaataatgggttgtatgattctaaaaaggggtttaac 40096  T

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Target: scaffold0083 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 10842 - 10894
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatct 190  Q
    ||||||||||||| |||||||||||||||||||| | ||| |||||| |||||    
T  10842 tttgggaattagggttagaagttgtaattggttgttgtaatagtagagaatct 10894  T

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Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 170
Target Start/End: Original strand, 5124 - 5156
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggtt 170  Q
    ||||||||||||| |||||||||||||||||||    
T  5124 tttgggaattagggttagaagttgtaattggtt 5156  T

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Target: scaffold0048 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 68725 - 68789
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| ||||| |||| |||||||||| ||| ||| ||||| |||| |||||||||    
T  68725 ctaaggtaagggtgggactacctttctctaataatgggttatatgattctaaaaacgggtttaac 68789  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 43786 - 43848
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 111  Q
    |||||||||||||| ||||||| || |||||||||| ||| ||||||||||||| ||||||||||    
T  43786 ctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattctgaaatagggtttaac 43848  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 32046 - 31994
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||||||||| |||| ||||||  | ||||||||||||||||||    
T  32046 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 31994  T

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Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 37353 - 37301
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||||||||| |||| ||||||  | ||||||||||||||||||    
T  37353 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 37301  T

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Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 31957 - 31924
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  31957 tttgggaattaggttttgaagttgtaattggttg 31924  T

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Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 37264 - 37231
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  37264 tttgggaattaggttttgaagttgtaattggttg 37231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 77740 - 77687
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  77740 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 77687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 499129 - 499092
Alignment:
Q  29 ggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  499129 ggctgccaatcgattatcctaaggtaagggtgggacta 499092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 660 - 570
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || | |||| ||||| | ||||||||| ||||| |||||||  |||| |||||||||| ||||||||||    
T  660 ctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaatggtttaattttgttgttgttgataattttgatgtt 570  T

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Target: scaffold0230 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 177
Target Start/End: Original strand, 6778 - 6813
Alignment:
Q  142 ggaattaggtttagaagttgtaattggttgatttaa 177  Q
    |||||||||||||||||||||||||||||| |||||    
T  6778 ggaattaggtttagaagttgtaattggttgttttaa 6813  T

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Target: scaffold0165 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 31982 - 31892
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| |  | | |||| ||||||  ||| |||||||||||||||||||  || |||||||| ||||||||||||||    
T  31982 ctaaggtaagggtgagactaaccatctttaatcatgagta-tatgattctgaaaaagggtttaattttatagttgttaatagttttgatgtt 31892  T

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Target: scaffold0156 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 16567 - 16528
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  16567 tttggcaattaggtttagaagttgtaattggttgttttaa 16528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 21574 - 21535
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  21574 tttgggaattatgtttagaagttgtaattggttgttttaa 21535  T

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Target: scaffold0149; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 29662 - 29695
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  29662 tttgggaattaggttttgaagttgtaattggttg 29695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 8129 - 8086
Alignment:
Q  96 tgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  8129 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 8086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 29316 - 29273
Alignment:
Q  96 tgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  29316 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 29273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 49782 - 49692
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||| ||||| | || | |||| ||||||   ||||||||||||||||||||||  || |  ||||||||||||||||||||    
T  49782 ctaaggtaagggtgggactaaccttctttaatcatgagtcc-ataattctgaaaaagggtttaattttatttttgttgatagttttgatgtt 49692  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 106140 - 106179
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaa 177  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  106140 tttgggaattaggtttagacgttgtaattggttgttttaa 106179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 138
Target Start/End: Complemental strand, 1313 - 1279
Alignment:
Q  104 ggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||| |||||||||||||||||||||||    
T  1313 ggtttaaccttatagttgttgatagttttgatgtt 1279  T

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Target: scaffold0462; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 138
Target Start/End: Complemental strand, 6819 - 6785
Alignment:
Q  104 ggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    ||||||||||| |||||||||||||||||||||||    
T  6819 ggtttaaccttatagttgttgatagttttgatgtt 6785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 62729 - 62608
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataat 188  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||||||| |  |||||||| || |||  |  ||||| |||    |||||||||||||    
T  62729 taatcctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgt-agaattagggtttgaaactaaaattgattgtagaaagagtagataat 62631  T
Q  189 ctgatgaattagggtaataattg 211  Q
    | ||||||||||| | |||||||    
T  62630 ccgatgaattaggttgataattg 62608  T

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Target: scaffold1939 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 135 - 90
Alignment:
Q  93 ttctgaaaaagggtttaaccttgtagttgttgatagttttgatgtt 138  Q
    |||||||||||||||| |  ||||||||||| ||||||||||||||    
T  135 ttctgaaaaagggttttaatttgtagttgttaatagttttgatgtt 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 1168 - 1135
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  1168 tttgggaattaggttttgaagttgtaattggttg 1135  T

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Target: scaffold1633; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 1257 - 1205
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  1257 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 557 - 590
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  557 tttgggaattaggttttgaagttgtaattggttg 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 468 - 520
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  468 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 4803 - 4836
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  4803 tttgggaattaggttttgaagttgtaattggttg 4836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 1128 - 1095
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  1128 tttgggaattaggttttgaagttgtaattggttg 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 1218 - 1165
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||||||||| ||||  |||||  | ||||||||||||||||||    
T  1218 ctaaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaa 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 9074 - 9025
Alignment:
Q  90 taattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    |||| |||||||||||||||| |||||||||||| ||| |||||||||||    
T  9074 taatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgtt 9025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 4475 - 4383
Alignment:
Q  46 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgata-gttttgatgtt 138  Q
    ||||||||||||||| ||||| | || | |||| || |||  |||||| | |||||| |||||||||||||||||||| ||| |||||||||||    
T  4475 cctaaggtaagggtgggactaaccttctttaatcataagta-tataatcccgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 4383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 6468 - 6509
Alignment:
Q  98 aaaaagggtttaacctt-gtagttgttgatagttttgatgtt 138  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  6468 aaaaagggtttaacctttgtagttgttgttagttttgatgtt 6509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 2527 - 2494
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  2527 tttgggaattaggttttgaagttgtaattggttg 2494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 3145 - 3112
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  3145 tttgggaattaggttttgaagttgtaattggttg 3112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 5615 - 5690
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 124  Q
    |||||||||||||| ||||||| || |||||||||| ||| ||||||||||||| ||| |||||| | || |||||||    
T  5615 ctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattctgaaataggatttaacatggttgttgttg 5690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 35543 - 35490
Alignment:
Q  47 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  35543 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 35490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 12622 - 12655
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  12622 tttgggaattaggttttgaagttgtaattggttg 12655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 21882 - 21915
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttg 171  Q
    |||||||||||||||| |||||||||||||||||    
T  21882 tttgggaattaggttttgaagttgtaattggttg 21915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 56012 - 55975
Alignment:
Q  29 ggctgccgatcgattatcctaaggtaagggtgtgacta 66  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  56012 ggctgccaatcgattatcctaaggtaagggtgagacta 55975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 4645 - 4586
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    |||| |||||||||||||||||||||||| |||| ||||| ||| || |||||| ||||||    
T  4645 tttgagaattaggtttagaagttgtaattagttggtttaatagt-gaaaatctgttgaatt 4586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 7368 - 7276
Alignment:
Q  9 gagatgaaccaaagaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 101  Q
    |||| ||||||||||| |  ||||||| || ||||| |||||||| |||||| ||||| | || | ||||  | |||||||||||||||||||    
T  7368 gagaagaaccaaagagaagaggctgccaattgattaacctaaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaa 7276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 79101 - 79049
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  79101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 79049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 78185 - 78237
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  78185 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 78237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 3145 - 3177
Alignment:
Q  142 ggaattaggtttagaagttgtaattggttgatt 174  Q
    ||||||||| |||||||||||||||||||||||    
T  3145 ggaattagggttagaagttgtaattggttgatt 3177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 24131 - 24183
Alignment:
Q  48 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 100  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  24131 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 135593 - 135652
Alignment:
Q  138 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 198  Q
    ||||||||||||  |||||||||| |||||||| |||||| |||||| |||||| ||||||    
T  135593 tttgggaattagagttagaagttgaaattggttaatttaatagtaga-aatctgttgaatt 135652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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