View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10691_low_11 (Length: 274)
Name: NF10691_low_11
Description: NF10691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10691_low_11 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 274
Target Start/End: Original strand, 41066375 - 41066629
Alignment:
| Q |
20 |
ccatgaaagtagagagagaccttcttggtttagagaagaaatgaatggaaacaaggagatagtgagaaacaagataagaaaatttaatgcattgtttgac |
119 |
Q |
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| T |
41066375 |
ccatgaaagtagagagagaccttcttggtttagagaagaaatgaatggaaacaaggagatagtgagaaacaagataagaaaatttaatgcattgtttgac |
41066474 |
T |
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| Q |
120 |
atgatgagttggttttctgctactgttctatctcatctaaaacatagcagcagtactattttttctgtgttactactctctatttttctctgtatcattt |
219 |
Q |
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| T |
41066475 |
atgatgagttggttttctgctactgttctatctcatctaaaacatagcagcagtactagtttttctatgttactactctctatttttctctttatcattt |
41066574 |
T |
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| Q |
220 |
gatacttgttggatattaaaattctcgtatcatcacttaaagttactgataaaga |
274 |
Q |
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| T |
41066575 |
gatacttgttggatattaaaattctcgtatcttcacttaaagttactgataaaga |
41066629 |
T |
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