View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10691_low_20 (Length: 245)
Name: NF10691_low_20
Description: NF10691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10691_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 219621 - 219840
Alignment:
| Q |
16 |
cagtagtcagtatgtaggcaggcagtcattggatcgagattagacagctcaaatttcaatgttaaaatctagactttccaattttctgataagcaattac |
115 |
Q |
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| T |
219621 |
cagtagtcggtatgtaggcaggcagtcattggatcgagattagacagctcaaatttcaatgttaaaatctagactttccaattttctgataagcaattac |
219720 |
T |
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| Q |
116 |
attggatcttattgagatgaaatttgattttaaggaatattaaatgtgtaggagtttgtgaaggcagtgattgcttatcagaaaaggttgaatactttaa |
215 |
Q |
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| T |
219721 |
attggatcttattgagatgaaatttgattttgaggaatattaaatgtgtaggagtttgtgaaggcagtgattgcttttcagaaaaggctgaatactttaa |
219820 |
T |
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| Q |
216 |
catcaatgccaaaacctatg |
235 |
Q |
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||||| ||||||||| |||| |
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| T |
219821 |
catcagtgccaaaacgtatg |
219840 |
T |
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