View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10693_low_4 (Length: 263)
Name: NF10693_low_4
Description: NF10693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10693_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 255
Target Start/End: Complemental strand, 39941899 - 39941662
Alignment:
| Q |
18 |
aattccttggaacagaggaagtagatacactaaccacccgaggcggaggaggtggtggcggaggtctaggtggaggaagtgtaagtgaatcccttgagtc |
117 |
Q |
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| T |
39941899 |
aattccttggaacagaggaagtagatacactaaccacccgcggcggaggaggtggtggcggaggtctaggtggaggaagtgtaagtgaatcccttgagtc |
39941800 |
T |
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| Q |
118 |
gtttgaatgaagatgcgtcaaattcggcgccggtggcggcgatgagaattttggccttctaggagaaccgtgctgaaaaagtgttgacggagacgccgga |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
39941799 |
gtttgaatgaagatgcgtcaaattcggcgccggtggcggcgatgagaatttcggccttctaggagaaccgtgctgaaaaagtgttgacggcgacgccgga |
39941700 |
T |
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| Q |
218 |
gcatgctttatagacggtatcatgacgcgtttcatctc |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
39941699 |
gcatgctttatagacggtatcatgacgcgtttcatctc |
39941662 |
T |
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