View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10694_high_2 (Length: 256)
Name: NF10694_high_2
Description: NF10694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10694_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 38983313 - 38983549
Alignment:
| Q |
2 |
gttttggaattttttccagagttcttgtggatgtggacctatctgagcagctctttgaaactgttgttgtggaaagggaagatcacgctctgtccattga |
101 |
Q |
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| T |
38983313 |
gttttgggattttttccagagttcttgtggatgtggacctatctgagcagctctttgaaactgttgttgtggaaagggaagatcatgctctgtccattga |
38983412 |
T |
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| Q |
102 |
tgtcttttatgataagcatccttccttctgtgctaattacaaaaccttgggacataacttaatcacacaaacaatactgaagtgcctgctagaatgaaaa |
201 |
Q |
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| T |
38983413 |
tgtcttttatgagaagcatccttccttctgtgctaattgcaaaaccttaggacatagcttaatcacacaaacaatactgaagtgcctgctagaatgaaaa |
38983512 |
T |
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| Q |
202 |
ttaggactgatttgaatggaaagaaacatgcttctaa |
238 |
Q |
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| T |
38983513 |
ctaggactgatttgaatggaaagaaacatgcttctaa |
38983549 |
T |
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