View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10694_low_12 (Length: 236)
Name: NF10694_low_12
Description: NF10694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10694_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 42 - 218
Target Start/End: Complemental strand, 41340125 - 41339949
Alignment:
| Q |
42 |
acattcctcagccatttcccaattgctaagtaccaaagtatcttgatggtaaataggggtccatatttgtcagccaatgtacctaagattttatggtgtc |
141 |
Q |
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| T |
41340125 |
acattcctcagccatttcccaattgctaagcaccaaagtatcttgatgataaataggggtccatatttgtcagccaatgcacctaagattttatggggtc |
41340026 |
T |
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| Q |
142 |
ctagtgaagccgtcaataatgggaggtgaccaagtattcgccacgcactatagaagcctctttgctatgagaaactt |
218 |
Q |
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| T |
41340025 |
ctagtgaagccgtcaataatgggaggtgaacaagtattcaccacgcactataggagcctctttgctatgagaaactt |
41339949 |
T |
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