View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10694_low_14 (Length: 234)
Name: NF10694_low_14
Description: NF10694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10694_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 37494778 - 37494978
Alignment:
| Q |
12 |
agcagcacagacgagtcctcctagatgcaatccagcagcagtgtaagaataaacgttaatattgccatcaatatgacccactgtaaaacatacaaaaggg |
111 |
Q |
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| T |
37494778 |
agcagcacacacgagtcctcctagatgcaatccagcagcagtgtaagaataaacgttaatgttgccatcaatatgacccactgtaaaacatacaaaaggg |
37494877 |
T |
|
| Q |
112 |
acattcaacttgtggtaattatcttccatatctactaaagttcttctaaagttattaaataatatccaagtatacgtataaaattatagtactgctagta |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37494878 |
acattcaacttgtggtaattatcttccatatctactaaagttcttctaaagttattaaataatatccaagtatacgtataaaattatagtactactagta |
37494977 |
T |
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| Q |
212 |
a |
212 |
Q |
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| T |
37494978 |
a |
37494978 |
T |
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