View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10695_low_1 (Length: 618)
Name: NF10695_low_1
Description: NF10695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10695_low_1 |
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Alignment Details
Target: chr6 (Bit Score: 575; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 1 - 603
Target Start/End: Complemental strand, 29006885 - 29006283
Alignment:
| Q |
1 |
atcaaattacaattgatgttataattttaattagccaaaaattccatgctagtctgagtggcatgtacttgaaatggtttcatcagagcatttggataat |
100 |
Q |
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| T |
29006885 |
atcaaattacaattggtgttataattttaattagccaaaaattccatgctagtctgagtggcatgtacttgaaatggtttcatcaaagcatttggataat |
29006786 |
T |
|
| Q |
101 |
gtgattactgatacatatctctttcagctttagtggtcgtgtgtttgaacaaactggtctaaaatttcaacaatgttaaaactcataaggagtattttgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006785 |
gtgattactgatacatatctctttcagctttagtggtcgtgtgtttgaacaatctggtctaaaatttcaacaatgttaaaactcataaggagtattttgc |
29006686 |
T |
|
| Q |
201 |
agtcaattgtcattctactcaatttagagattagtgtttgctgctgtgctagagaatatccaatttttgaagaaaaaattgtttcacctaatgaaatgaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006685 |
agtcaattgtcattctactcaatttagagattagtgtttgctgctgtgctagagaatatccaatttttgaagaaaaaattgtttcacctaatgaaatgaa |
29006586 |
T |
|
| Q |
301 |
cttctccaaatcatttttaatgggtatacatgtaacatataggtaggtttaattgataaatagttgattcatggtccttaaagggagtaggttcaactcc |
400 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
29006585 |
attctccaaatcatttttaatgggtaaacatgtaacatataggttggtttaattgataaatagttgattcatggtccttaaagggagtagattcaactcc |
29006486 |
T |
|
| Q |
401 |
catccccttcgtcaggactctaaatcttgattcatgccattgctagtttgcttcaacttgttcctattctatagcttcaggtccacacaacatacttgtg |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006485 |
catccccttcgtcaggactctaaatcttgattcatgccattgctagtttgcttcaacttgttcctattctatagcttcaggtccacacaacatacttgtg |
29006386 |
T |
|
| Q |
501 |
ccataacaacgtgtccaagcattttgtgagttgtttccattagtgtttaataagaaaagagacatgtcatttataatggcaaacatgattgagtcttatt |
600 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006385 |
ccataacaacgtgtccaagcattttgtgagttgtttccattagtgtttaataagaaaagagacatgtcatttataatggcaaacatgattgagtcttatt |
29006286 |
T |
|
| Q |
601 |
ctt |
603 |
Q |
| |
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||| |
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| T |
29006285 |
ctt |
29006283 |
T |
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