View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10695_low_11 (Length: 251)

Name: NF10695_low_11
Description: NF10695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10695_low_11
NF10695_low_11
[»] chr8 (57 HSPs)
chr8 (9-234)||(32798368-32798593)
chr8 (31-234)||(44076221-44076424)
chr8 (75-203)||(45281091-45281219)
chr8 (52-203)||(32695155-32695305)
chr8 (75-234)||(4810524-4810679)
chr8 (52-218)||(13117513-13117678)
chr8 (74-198)||(42098654-42098778)
chr8 (102-231)||(42872120-42872247)
chr8 (66-153)||(9854773-9854860)
chr8 (75-153)||(24192566-24192644)
chr8 (64-218)||(6397854-6398006)
chr8 (64-234)||(42870868-42871039)
chr8 (78-188)||(42877720-42877827)
chr8 (87-153)||(10669360-10669426)
chr8 (75-153)||(20180577-20180655)
chr8 (67-234)||(22551062-22551227)
chr8 (77-234)||(30786731-30786888)
chr8 (78-218)||(42100013-42100151)
chr8 (76-145)||(42878735-42878803)
chr8 (33-153)||(31845657-31845775)
chr8 (84-234)||(41629763-41629911)
chr8 (75-218)||(38696379-38696521)
chr8 (78-217)||(32693902-32694039)
chr8 (66-141)||(17455194-17455269)
chr8 (78-203)||(13116416-13116539)
chr8 (67-133)||(13513572-13513638)
chr8 (67-133)||(13603105-13603171)
chr8 (92-141)||(40437516-40437565)
chr8 (75-144)||(43202240-43202309)
chr8 (78-234)||(45279735-45279889)
chr8 (159-218)||(17339535-17339594)
chr8 (83-154)||(42362662-42362732)
chr8 (66-234)||(8571509-8571678)
chr8 (52-153)||(24305177-24305278)
chr8 (75-126)||(37400942-37400993)
chr8 (66-128)||(21670221-21670283)
chr8 (75-153)||(24069352-24069430)
chr8 (161-218)||(6398485-6398542)
chr8 (52-153)||(7770781-7770882)
chr8 (52-153)||(7796691-7796792)
chr8 (52-153)||(7815972-7816073)
chr8 (80-153)||(14840807-14840880)
chr8 (177-218)||(26696603-26696644)
chr8 (177-218)||(30787604-30787645)
chr8 (50-99)||(36938866-36938915)
chr8 (66-127)||(37276140-37276201)
chr8 (43-234)||(26697704-26697893)
chr8 (70-126)||(39173277-39173333)
chr8 (179-218)||(28418877-28418916)
chr8 (75-128)||(14030478-14030531)
chr8 (67-100)||(21962008-21962041)
chr8 (52-145)||(34617078-34617171)
chr8 (52-153)||(39515331-39515432)
chr8 (68-153)||(44606271-44606356)
chr8 (178-234)||(8570173-8570229)
chr8 (39-127)||(28735151-28735238)
chr8 (70-126)||(35800878-35800934)
[»] chr2 (46 HSPs)
chr2 (9-234)||(11317204-11317429)
chr2 (9-234)||(42641697-42641921)
chr2 (9-219)||(32469220-32469428)
chr2 (72-234)||(43033137-43033297)
chr2 (80-218)||(29219456-29219595)
chr2 (80-218)||(29332755-29332894)
chr2 (52-218)||(18616885-18617051)
chr2 (75-203)||(6030372-6030500)
chr2 (102-234)||(43034400-43034532)
chr2 (75-218)||(1085290-1085431)
chr2 (75-234)||(17459308-17459468)
chr2 (78-211)||(11547737-11547870)
chr2 (155-234)||(7437743-7437822)
chr2 (33-153)||(4920921-4921039)
chr2 (122-234)||(17460635-17460745)
chr2 (75-130)||(35903665-35903720)
chr2 (80-150)||(8320895-8320965)
chr2 (78-203)||(32470482-32470605)
chr2 (67-141)||(34513448-34513522)
chr2 (102-234)||(11315988-11316118)
chr2 (75-234)||(28562713-28562870)
chr2 (78-218)||(6028787-6028926)
chr2 (63-153)||(28611145-28611233)
chr2 (78-234)||(34464023-34464178)
chr2 (48-153)||(25570749-25570854)
chr2 (105-145)||(16295150-16295190)
chr2 (80-218)||(34512885-34513020)
chr2 (66-128)||(4512263-4512325)
chr2 (180-234)||(28561423-28561477)
chr2 (75-137)||(30748630-30748692)
chr2 (78-218)||(1083059-1083197)
chr2 (75-140)||(30749228-30749293)
chr2 (69-124)||(2277366-2277421)
chr2 (161-219)||(7436537-7436594)
chr2 (68-126)||(23177833-23177891)
chr2 (68-126)||(23589090-23589148)
chr2 (75-153)||(26205145-26205223)
chr2 (75-153)||(34467641-34467719)
chr2 (66-127)||(7983592-7983653)
chr2 (66-127)||(12853044-12853105)
chr2 (66-127)||(14714650-14714711)
chr2 (75-120)||(16290697-16290742)
chr2 (185-234)||(36010632-36010681)
chr2 (50-94)||(7037157-7037200)
chr2 (68-116)||(13029453-13029500)
chr2 (50-153)||(15850540-15850643)
[»] chr3 (63 HSPs)
chr3 (9-234)||(38242352-38242577)
chr3 (71-218)||(10732028-10732174)
chr3 (52-175)||(35371021-35371144)
chr3 (52-234)||(3208539-3208721)
chr3 (52-194)||(26886367-26886508)
chr3 (59-218)||(41264540-41264698)
chr3 (88-195)||(27841625-27841732)
chr3 (87-218)||(53614187-53614318)
chr3 (50-153)||(48083362-48083465)
chr3 (122-203)||(53622748-53622830)
chr3 (75-140)||(10338886-10338951)
chr3 (52-145)||(14745080-14745173)
chr3 (92-172)||(34819204-34819285)
chr3 (50-232)||(12107857-12108042)
chr3 (52-234)||(53624243-53624422)
chr3 (9-134)||(53194450-53194574)
chr3 (75-218)||(10730956-10731097)
chr3 (75-150)||(10301072-10301147)
chr3 (159-234)||(18197202-18197277)
chr3 (76-145)||(3455529-3455597)
chr3 (78-234)||(40244242-40244395)
chr3 (67-218)||(42684947-42685097)
chr3 (78-203)||(38240992-38241114)
chr3 (63-153)||(49379837-49379926)
chr3 (66-127)||(11219588-11219649)
chr3 (75-239)||(36175313-36175475)
chr3 (63-153)||(13621055-13621144)
chr3 (43-218)||(20336528-20336702)
chr3 (78-218)||(27837991-27838128)
chr3 (78-218)||(35372066-35372203)
chr3 (64-126)||(44602936-44602997)
chr3 (75-234)||(53194774-53194931)
chr3 (14-127)||(5123189-5123301)
chr3 (75-144)||(7270467-7270536)
chr3 (78-234)||(34818141-34818295)
chr3 (161-217)||(53187630-53187686)
chr3 (66-109)||(7483422-7483465)
chr3 (106-145)||(11224776-11224815)
chr3 (44-127)||(53808476-53808558)
chr3 (44-100)||(17349978-17350033)
chr3 (78-234)||(53420371-53420527)
chr3 (178-234)||(53421766-53421822)
chr3 (179-218)||(18458663-18458702)
chr3 (50-218)||(20314642-20314809)
chr3 (75-126)||(28909510-28909561)
chr3 (87-126)||(37415157-37415196)
chr3 (179-218)||(50809492-50809531)
chr3 (179-218)||(50810840-50810879)
chr3 (179-218)||(50864985-50865024)
chr3 (179-218)||(50866331-50866370)
chr3 (38-127)||(7821855-7821944)
chr3 (177-235)||(12106628-12106686)
chr3 (75-153)||(21128057-21128135)
chr3 (66-100)||(39133202-39133236)
chr3 (102-213)||(40364395-40364505)
chr3 (83-153)||(43346361-43346431)
chr3 (66-127)||(8371378-8371439)
chr3 (66-127)||(32979246-32979307)
chr3 (181-234)||(37736089-37736142)
chr3 (78-218)||(41263709-41263847)
chr3 (122-213)||(26887506-26887595)
chr3 (179-234)||(36176512-36176568)
chr3 (83-131)||(46368965-46369013)
[»] chr7 (54 HSPs)
chr7 (9-234)||(43460660-43460884)
chr7 (75-234)||(32255044-32255204)
chr7 (52-213)||(11502301-11502462)
chr7 (75-212)||(40811397-40811534)
chr7 (52-218)||(13564119-13564284)
chr7 (13-194)||(22537654-22537832)
chr7 (87-218)||(22336050-22336181)
chr7 (52-145)||(35295842-35295935)
chr7 (66-234)||(47454392-47454558)
chr7 (33-218)||(47059179-47059367)
chr7 (33-153)||(16756006-16756124)
chr7 (75-153)||(44372864-44372942)
chr7 (75-153)||(44381720-44381798)
chr7 (94-153)||(46201266-46201325)
chr7 (64-234)||(47060368-47060536)
chr7 (75-153)||(669292-669369)
chr7 (63-153)||(41328354-41328443)
chr7 (78-218)||(11501251-11501389)
chr7 (68-153)||(43441481-43441566)
chr7 (88-203)||(22337288-22337401)
chr7 (80-234)||(40508433-40508586)
chr7 (115-203)||(41078842-41078930)
chr7 (78-213)||(43459531-43459664)
chr7 (120-234)||(32256344-32256456)
chr7 (81-143)||(2414890-2414952)
chr7 (78-218)||(3413603-3413742)
chr7 (69-234)||(30334539-30334698)
chr7 (75-153)||(39981452-39981530)
chr7 (177-234)||(33096924-33096981)
chr7 (75-210)||(40509637-40509771)
chr7 (84-232)||(41079748-41079894)
chr7 (178-234)||(6173455-6173511)
chr7 (75-210)||(22115067-22115201)
chr7 (179-234)||(30333340-30333395)
chr7 (92-234)||(46835730-46835872)
chr7 (95-153)||(15992270-15992328)
chr7 (75-234)||(4299951-4300109)
chr7 (161-218)||(24844332-24844389)
chr7 (50-218)||(9662116-9662281)
chr7 (84-127)||(10957067-10957110)
chr7 (177-239)||(45454088-45454150)
chr7 (66-127)||(4167609-4167670)
chr7 (50-127)||(26406283-26406359)
chr7 (161-234)||(45455360-45455433)
chr7 (159-218)||(22538834-22538893)
chr7 (179-234)||(32602988-32603043)
chr7 (179-234)||(47456381-47456436)
chr7 (75-133)||(24494957-24495015)
chr7 (50-153)||(25154815-25154920)
chr7 (33-126)||(48312202-48312295)
chr7 (68-109)||(131898-131939)
chr7 (178-210)||(30310200-30310232)
chr7 (121-153)||(33779036-33779068)
chr7 (50-153)||(35484191-35484294)
[»] chr6 (19 HSPs)
chr6 (9-234)||(7311561-7311785)
chr6 (66-197)||(5187515-5187646)
chr6 (52-218)||(17837687-17837852)
chr6 (75-213)||(23392290-23392428)
chr6 (75-203)||(29381632-29381760)
chr6 (66-194)||(18346644-18346771)
chr6 (75-218)||(12669794-12669936)
chr6 (63-153)||(11722921-11723011)
chr6 (85-218)||(23397268-23397399)
chr6 (78-218)||(29380262-29380400)
chr6 (159-212)||(6702857-6702910)
chr6 (92-153)||(11967351-11967412)
chr6 (115-218)||(32506969-32507071)
chr6 (115-234)||(6452453-6452572)
chr6 (177-218)||(6452355-6452396)
chr6 (78-218)||(17839046-17839184)
chr6 (178-218)||(232245-232285)
chr6 (75-127)||(7312187-7312238)
chr6 (75-127)||(24757043-24757095)
[»] scaffold0118 (1 HSPs)
scaffold0118 (59-234)||(43462-43636)
[»] chr5 (33 HSPs)
chr5 (75-234)||(22047787-22047947)
chr5 (75-234)||(39603908-39604068)
chr5 (52-234)||(30859050-30859233)
chr5 (75-234)||(325089-325246)
chr5 (75-234)||(27705218-27705377)
chr5 (66-218)||(30910812-30910965)
chr5 (67-145)||(11262536-11262614)
chr5 (75-205)||(15548321-15548456)
chr5 (68-153)||(1102753-1102838)
chr5 (78-218)||(1010272-1010409)
chr5 (78-218)||(8521326-8521463)
chr5 (75-218)||(33173862-33174005)
chr5 (67-218)||(22308694-22308844)
chr5 (98-145)||(1009328-1009375)
chr5 (33-133)||(13520660-13520760)
chr5 (80-134)||(4127161-4127215)
chr5 (93-218)||(30912084-30912207)
chr5 (168-218)||(39605464-39605514)
chr5 (14-127)||(10977183-10977295)
chr5 (122-234)||(30857855-30857965)
chr5 (66-153)||(9220352-9220441)
chr5 (87-150)||(10735901-10735964)
chr5 (84-127)||(28702729-28702772)
chr5 (75-145)||(36898884-36898954)
chr5 (66-127)||(21387795-21387856)
chr5 (161-234)||(22049124-22049197)
chr5 (50-153)||(40058150-40058253)
chr5 (75-153)||(324174-324252)
chr5 (75-153)||(15856665-15856743)
chr5 (79-153)||(35081344-35081418)
chr5 (66-127)||(7426799-7426860)
chr5 (177-234)||(15941328-15941385)
chr5 (66-127)||(18693856-18693916)
[»] chr4 (81 HSPs)
chr4 (13-203)||(7707674-7707864)
chr4 (52-234)||(2312362-2312543)
chr4 (63-234)||(27850827-27850993)
chr4 (9-153)||(19750131-19750275)
chr4 (9-153)||(19789531-19789675)
chr4 (75-234)||(52239932-52240091)
chr4 (79-219)||(1794481-1794622)
chr4 (9-153)||(56085482-56085625)
chr4 (75-203)||(15449977-15450105)
chr4 (50-234)||(6348210-6348392)
chr4 (92-218)||(23201917-23202043)
chr4 (66-203)||(13165581-13165717)
chr4 (87-218)||(11968582-11968713)
chr4 (67-234)||(42871150-42871315)
chr4 (51-232)||(53432119-53432300)
chr4 (113-234)||(6349492-6349614)
chr4 (75-153)||(44498596-44498674)
chr4 (70-188)||(40723329-40723445)
chr4 (75-218)||(53435656-53435798)
chr4 (78-153)||(4871629-4871704)
chr4 (161-234)||(390272-390345)
chr4 (75-234)||(1587237-1587395)
chr4 (75-234)||(1829808-1829966)
chr4 (75-144)||(56157399-56157468)
chr4 (68-213)||(13166665-13166809)
chr4 (87-234)||(42810118-42810264)
chr4 (113-234)||(52963624-52963743)
chr4 (75-144)||(7053321-7053390)
chr4 (33-134)||(26629944-26630044)
chr4 (75-234)||(27847733-27847889)
chr4 (75-193)||(4714116-4714233)
chr4 (80-218)||(11438476-11438613)
chr4 (33-141)||(36845557-36845664)
chr4 (63-150)||(52138683-52138771)
chr4 (50-145)||(49896462-49896557)
chr4 (102-234)||(393568-393699)
chr4 (75-153)||(26496212-26496290)
chr4 (178-234)||(1188898-1188954)
chr4 (89-145)||(34326870-34326926)
chr4 (33-128)||(1519970-1520065)
chr4 (130-212)||(1588045-1588128)
chr4 (179-234)||(37882889-37882944)
chr4 (160-234)||(2310978-2311052)
chr4 (85-218)||(7708702-7708833)
chr4 (64-126)||(23103901-23103962)
chr4 (180-234)||(24426394-24426448)
chr4 (64-126)||(45535207-45535268)
chr4 (177-218)||(31965906-31965947)
chr4 (75-144)||(36243663-36243732)
chr4 (161-234)||(37884265-37884338)
chr4 (50-218)||(13533140-13533305)
chr4 (50-145)||(28590782-28590877)
chr4 (78-153)||(33231525-33231599)
chr4 (84-127)||(35350021-35350064)
chr4 (13-127)||(38370441-38370556)
chr4 (84-127)||(39057680-39057723)
chr4 (52-153)||(26393010-26393111)
chr4 (177-234)||(31968396-31968453)
chr4 (177-218)||(42872303-42872344)
chr4 (78-234)||(52241063-52241216)
chr4 (52-153)||(56000419-56000520)
chr4 (154-218)||(33232678-33232742)
chr4 (178-218)||(44503684-44503724)
chr4 (178-218)||(53205488-53205528)
chr4 (159-203)||(54866617-54866661)
chr4 (38-128)||(53401351-53401441)
chr4 (50-124)||(6140242-6140315)
chr4 (80-134)||(8682756-8682809)
chr4 (66-108)||(36604604-36604646)
chr4 (66-100)||(36604737-36604771)
chr4 (122-218)||(40792822-40792914)
chr4 (52-125)||(3533491-3533564)
chr4 (50-127)||(41401602-41401679)
chr4 (66-111)||(43894279-43894324)
chr4 (66-127)||(44302878-44302939)
chr4 (178-234)||(1831268-1831324)
chr4 (75-127)||(2162770-2162822)
chr4 (178-218)||(4129064-4129104)
chr4 (178-218)||(10168788-10168828)
chr4 (154-218)||(50548204-50548268)
chr4 (178-210)||(53204440-53204472)
[»] chr1 (54 HSPs)
chr1 (94-234)||(45584929-45585070)
chr1 (52-218)||(15232823-15232988)
chr1 (38-203)||(16964992-16965157)
chr1 (68-234)||(46110337-46110501)
chr1 (33-153)||(52078006-52078125)
chr1 (87-234)||(27814347-27814493)
chr1 (75-194)||(49801712-49801831)
chr1 (75-234)||(50444602-50444759)
chr1 (78-218)||(15746673-15746811)
chr1 (92-153)||(13147336-13147397)
chr1 (78-218)||(16963905-16964043)
chr1 (75-188)||(48096935-48097046)
chr1 (75-234)||(15072693-15072851)
chr1 (77-210)||(44999367-44999499)
chr1 (75-153)||(9226118-9226196)
chr1 (63-153)||(14478401-14478491)
chr1 (92-153)||(3617417-3617478)
chr1 (14-234)||(35943289-35943508)
chr1 (76-239)||(41873875-41874037)
chr1 (68-153)||(48527669-48527754)
chr1 (75-153)||(18821642-18821720)
chr1 (68-141)||(13894760-13894833)
chr1 (161-234)||(52628861-52628934)
chr1 (75-213)||(14470932-14471069)
chr1 (80-234)||(14477699-14477852)
chr1 (113-234)||(23091406-23091527)
chr1 (34-153)||(26802075-26802194)
chr1 (75-153)||(51445725-51445803)
chr1 (75-144)||(28050465-28050534)
chr1 (97-153)||(9482590-9482646)
chr1 (178-234)||(15071397-15071453)
chr1 (113-172)||(34350228-34350288)
chr1 (33-128)||(5612946-5613041)
chr1 (75-134)||(12665944-12666003)
chr1 (75-130)||(46318521-46318576)
chr1 (87-153)||(6049340-6049406)
chr1 (92-154)||(9485224-9485286)
chr1 (122-218)||(49802846-49802940)
chr1 (80-145)||(51300168-51300233)
chr1 (178-234)||(46111493-46111549)
chr1 (80-126)||(7306163-7306209)
chr1 (33-143)||(10722238-10722347)
chr1 (50-234)||(34351843-34352017)
chr1 (78-218)||(15233949-15234086)
chr1 (177-234)||(44278353-44278410)
chr1 (66-127)||(50678521-50678581)
chr1 (178-218)||(24499660-24499700)
chr1 (66-126)||(27556431-27556490)
chr1 (33-128)||(26286571-26286666)
chr1 (66-127)||(26056044-26056105)
chr1 (50-127)||(40811410-40811486)
chr1 (50-127)||(51299441-51299518)
chr1 (33-141)||(10711935-10712042)
chr1 (178-218)||(16123358-16123398)
[»] scaffold0077 (2 HSPs)
scaffold0077 (75-218)||(54086-54230)
scaffold0077 (130-218)||(52663-52749)
[»] scaffold0031 (2 HSPs)
scaffold0031 (79-234)||(125137-125294)
scaffold0031 (67-234)||(124024-124188)
[»] scaffold0034 (2 HSPs)
scaffold0034 (80-234)||(108568-108722)
scaffold0034 (78-234)||(109652-109806)
[»] scaffold0201 (1 HSPs)
scaffold0201 (76-234)||(21182-21339)
[»] scaffold0011 (1 HSPs)
scaffold0011 (60-218)||(127504-127660)
[»] scaffold2071 (1 HSPs)
scaffold2071 (67-143)||(576-652)
[»] scaffold0013 (1 HSPs)
scaffold0013 (70-190)||(32670-32790)
[»] scaffold0019 (1 HSPs)
scaffold0019 (78-218)||(63037-63176)
[»] scaffold0219 (1 HSPs)
scaffold0219 (80-153)||(8099-8171)
[»] scaffold0051 (1 HSPs)
scaffold0051 (66-127)||(39798-39859)
[»] scaffold1152 (1 HSPs)
scaffold1152 (122-234)||(2426-2537)
[»] scaffold0128 (1 HSPs)
scaffold0128 (80-171)||(22099-22188)
[»] scaffold1974 (1 HSPs)
scaffold1974 (55-126)||(515-585)
[»] scaffold1878 (1 HSPs)
scaffold1878 (55-126)||(689-759)
[»] scaffold0078 (1 HSPs)
scaffold0078 (178-233)||(18868-18923)
[»] scaffold0015 (1 HSPs)
scaffold0015 (67-100)||(207696-207729)
[»] scaffold0290 (1 HSPs)
scaffold0290 (70-126)||(9379-9435)
[»] scaffold0084 (1 HSPs)
scaffold0084 (66-126)||(13101-13161)


Alignment Details
Target: chr8 (Bit Score: 158; Significance: 4e-84; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 32798368 - 32798593
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||| ||||||||||||| | |||| ||||||||||||  ||||| |||| ||||||||||||||||||||||| |||| |||||||||||||||||    
T  32798368 ttaagtggtgatggttcaacgtaagataaaatacacctacgcaatccagcggtcctccttttaaagaaaagatcaaacggtttaaattaaaataattaat 32798467  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattga 208  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  32798468 aggatctatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccgtgaggatttatttgacaaacggagaaaaaattga 32798567  T
Q  209 gggaccaaaagatacgtgttattaat 234  Q
    ||||| ||||| ||||| ||||||||    
T  32798568 gggactaaaaggtacgttttattaat 32798593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 44076221 - 44076424
Alignment:
Q  31 atgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct 130  Q
    |||||| |||| |||| ||||||| ||||||||   ||||||  || ||||||||||||| ||||||||| |||||||| ||| ||||||||| || | |    
T  44076221 atgatacaataaacct-cgtgatcaaacggttcgtgttttaataaatagatcaaatggtttaaattaaaaaaattaataagatttatggtggatcatttt 44076319  T
Q  131 taaggttggtccaccgtagacatcatttgag-ttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgtta 229  Q
    ||| |||| |||||| ||||||||||||| | ||||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  44076320 taatgttgttccaccatagacatcatttggggttaaacttaactgtagggatttatttggcaaacggaggaaaaattgaggcaccaaaagatacgtttta 44076419  T
Q  230 ttaat 234  Q
    |||||    
T  44076420 ttaat 44076424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 75 - 203
Target Start/End: Original strand, 45281091 - 45281219
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    ||||||||||| |||| |||||||||  ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||| ||||| |    
T  45281091 aaaagatcaaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttggtccaccgtagacatcatttggattaaagttaactg 45281190  T
Q  175 tgaggatttatttggcaaacggaggaaaa 203  Q
    |  |||||||||||||||| |||||||||    
T  45281191 ttgggatttatttggcaaatggaggaaaa 45281219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 32695155 - 32695305
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||| ||||||| |||| |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||    
T  32695155 atccaatggttctc-ttttaaaaaaaa-atcaaacggtttaaattaaaataattaataggatctatggtggaccaatcttaagattggttcaccatagac 32695252  T
Q  152 atcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaa 203  Q
    ||||||| | |||||||||||| || |||| | ||||||||||| ||||||||    
T  32695253 atcatttggggttaaacttaacggtcaggactaatttggcaaacagaggaaaa 32695305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 4810679 - 4810524
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgag-ttaaacttaacc 173  Q
    |||||||||||  ||| |||||||||  |||||||||||||||||||||||||||||||      |||||| ||||||||||||| | ||||| ||||||    
T  4810679 aaaagatcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaat-----tccaccatagacatcatttggggttaaagttaacc 4810585  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||  ||||||||||||||||||||| |||| |||| ||||||||| |||||| ||||||||    
T  4810584 gtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaat 4810524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 218
Target Start/End: Original strand, 13117513 - 13117678
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||| ||||||| |||| |||||| |||| | ||||||||||||||||||||||||| ||||||||| |||| ||||||||||  || |     
T  13117513 atccaatggttctc-ttttaaaaaaaacatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccactatatag 13117611  T
Q  152 atcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||| ||||||||| |  ||  ||||||||||||||||| ||||||||  |||||||| ||||    
T  13117612 atcatttgggttaaacttgatggtcgggatttatttggcaaacagaggaaaatgtgagggactaaaa 13117678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 42098778 - 42098654
Alignment:
Q  74 gaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaac 172  Q
    ||||| |||||| |||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| | |||||| |||||    
T  42098778 gaaaaaatcaaacggttgaaattaaagtaattaataggatctatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaac 42098679  T
Q  173 cgtgaggatttatttggcaaacggag 198  Q
     ||  |||||||||||||||||||||    
T  42098678 agt-cggatttatttggcaaacggag 42098654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 42872120 - 42872247
Alignment:
Q  102 aattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttga-gttaaacttaaccgtgaggatttatttggcaaacggagga 200  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| ||||   ||||||| |||||| |||||||| |||||||||||| |||||||||||    
T  42872120 aattaataggatctatggtagaccactcttaaggttggtctaccataga---catttgaggttaaagttaaccgtcaggatttatttgacaaacggagga 42872216  T
Q  201 aaaattgagggaccaaaagatacgtgttatt 231  Q
    |||| ||| |||| ||||  ||||| |||||    
T  42872217 aaaagtgaaggactaaaacgtacgttttatt 42872247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 9854773 - 9854860
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||||| |||| ||||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  9854773 cttttaaaaaaaaaatcaaatggtttaaattagaagaattaataggatctatggtggaccactcttaaagttggtccaccatagacat 9854860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 24192566 - 24192644
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| |||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24192566 aaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccatagacat 24192644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 218
Target Start/End: Complemental strand, 6398006 - 6397854
Alignment:
Q  64 tccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagtt 163  Q
    ||||||| || || ||||||||||||| ||||||||| |||||||| | |||||||||||||||| | |||||||||  ||| |||  ||  || |||||    
T  6398006 tcctttttaaaaacagatcaaatggtttaaattaaaaaaattaataaggtctatggtggaccactgtaaaggttggtttaccatagttat--ttggagtt 6397909  T
Q  164 aaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||| |||||  | | |||||||||||||||||||| ||||| |||||||| ||||    
T  6397908 aaatttaacattcatgatttatttggcaaacggagaaaaaaatgagggactaaaa 6397854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 234
Target Start/End: Complemental strand, 42871039 - 42870868
Alignment:
Q  64 tccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagt 162  Q
    ||||||||||  | |||||||| |||| |||||| || | |||||| | |||| ||||||||||||||||| |||||||||  |||||||| ||| | ||    
T  42871039 tccttttaaaacacagatcaaacggtttaaattacaaaatttaataaggtctacggtggaccactcttaagattggtccacaatagacatcttttggggt 42870940  T
Q  163 taaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||| || |||||| ||| ||||||| || |||||| | |||||| ||||  ||||| ||||||||    
T  42870939 taaacttaacagtcaggattcattcggcaaacagacgaaaaagtaagggactaaaacgtacgttttattaat 42870868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 42877827 - 42877720
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    |||||||| |||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||| || ||||  || | |||||| ||||||||      
T  42877827 agatcaaagggttgaaattaaa-taattaataggatctatggtggaccattcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcg 42877731  T
Q  178 ggatttatttg 188  Q
    |||||||||||    
T  42877730 ggatttatttg 42877720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 10669360 - 10669426
Alignment:
Q  87 ggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  10669360 ggtttaaattaaaatatttaataggatctatggtggaccactcttaaggttggttcaccatagacat 10669426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 20180577 - 20180655
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||    
T  20180577 aaaagatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaatgttagtccactatagacat 20180655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 234
Target Start/End: Complemental strand, 22551227 - 22551062
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaa 166  Q
    ||||||| || |||||||| |||| |||||| || | |||||| | | ||||||||| |||| |||||||| ||||||| |||| ||  || | ||||||    
T  22551227 ttttaaaaaacagatcaaacggtttaaattacaaaatttaataaggtttatggtggatcacttttaaggtttgtccaccatagagat--ttggggttaaa 22551130  T
Q  167 cttaaccgtg-aggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||  |  ||||||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||    
T  22551129 cttaacaatccaggatttatttggcaaatggag-aaaaagtgagggaccaaaagatacgttttattaat 22551062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 234
Target Start/End: Complemental strand, 30786888 - 30786731
Alignment:
Q  77 aagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaac--ttaaccg 174  Q
    ||||||||| |||||||||||| | |||||||| | | |||| ||||||||| |||| |||| |||||| |||||||  || ||||||||   ||||| |    
T  30786888 aagatcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagacat--ttagagttaaaaagttaacag 30786791  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |  | ||||||||||||||||||| ||||| ||||||| ||||| |||||| ||||||||    
T  30786790 tcggaatttatttggcaaacggagaaaaaagtgagggatcaaaatatacgttttattaat 30786731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 42100013 - 42100151
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | |||| | ||||||||| ||||||||||||||||  ||||||  ||  ||||||| ||||| ||      
T  42100013 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaggttggtccaccaaagacat--ttgaagttaaagttaacagtcg 42100110  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||| ||||||||||||||||||||||  ||||||| |||||    
T  42100111 ggaattatttggcaaacggaggaaaatatgagggatcaaaa 42100151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 42878735 - 42878803
Alignment:
Q  76 aaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  42878735 aaagatcaaagggttaagattaaa-taattaataggatctatggtggaccacacttaaggttggtccacc 42878803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 31845657 - 31845775
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactctta 132  Q
    |||| ||||||||||||| ||| || |||  |||||| ||| |||||||||||  ||| | ||||||||||||||||||| |||||||||||||||||||    
T  31845657 gataaaatacacctacgtaatctaatggtcatcctttaaaa-aaaagatcaaacagtttacattaaaataattaataggacctatggtggaccactctta 31845755  T
Q  133 aggttggtccaccgtagacat 153  Q
    | |||||| |||| |||||||    
T  31845756 a-gttggttcaccatagacat 31845775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 41629911 - 41629763
Alignment:
Q  84 aatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggattt 183  Q
    ||||||||||||||| | |||||||| | | || | || |||||| ||||||||||| |||| ||||| |  || ||||| || ||||| ||  ||||||    
T  41629911 aatggttaaaattaacaaaattaataaggtatacgatgaaccacttttaaggttggttcaccatagactt--ttggagttcaagttaacggtcgggattt 41629814  T
Q  184 atttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||| ||||| |||||||| ||||| |||||| ||||||||    
T  41629813 atttggcaaacggaagaaaacttgagggatcaaaatatacgttttattaat 41629763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 218
Target Start/End: Complemental strand, 38696521 - 38696379
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    |||| |||||| ||||||||||| || |||||||  |||||||||||||||||| |||||||||||| ||| |||||||  || | |||||||||||  |    
T  38696521 aaaaaatcaaagggttaaaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccatagacat--ttagggttaaacttaatag 38696424  T
Q  175 tga-ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
      | ||||||||||| |  ||||||| ||| ||||||||||||||    
T  38696423 caagggatttatttgaccgacggaggcaaacttgagggaccaaaa 38696379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 32694039 - 32693902
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    |||||||| |||||||||||| | |||||||| | |||||| | | ||||| |||||||||||||| | || ||||  ||  ||||||| ||||| ||      
T  32694039 agatcaaacggttaaaattaataaaattaataaggtctatgataggccacttttaaggttggtccatcatatacat--ttaaagttaaagttaactgttg 32693942  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaa 217  Q
    ||||||||||||||||||||||||||  ||| ||||||||    
T  32693941 ggatttatttggcaaacggaggaaaatctgaaggaccaaa 32693902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 17455269 - 17455194
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtc 141  Q
    |||||||| || |||| ||| |||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  17455269 cttttaaaaaatagataaaacggttcaaattaaaataattaataagatctatggtggaccacttttaagattggtc 17455194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 13116539 - 13116416
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | || ||||||| |||| | ||||||||||| ||| |||||| |   |||||||  || |||||||| ||||| ||      
T  13116539 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattatagacat--ttggagttaaagttaacagtcg 13116442  T
Q  178 ggatttatttggcaaacggaggaaaa 203  Q
    ||||||||||||||||||||||||||    
T  13116441 ggatttatttggcaaacggaggaaaa 13116416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 13513638 - 13513572
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaa 133  Q
    |||||||||||| ||||||||||||||||||||| |||||||| | | |||||||||||||| ||||    
T  13513638 ttttaaagaaaaaatcaaatggttaaaattaaaaaaattaataaggtatatggtggaccacttttaa 13513572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 13603171 - 13603105
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaa 133  Q
    |||||||||||| ||||||||||||||||||||| |||||||| | | |||||||||||||| ||||    
T  13603171 ttttaaagaaaaaatcaaatggttaaaattaaaaaaattaataaggtatatggtggaccacttttaa 13603105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 40437516 - 40437565
Alignment:
Q  92 aaattaaaataattaataggatctatggtggaccactcttaaggttggtc 141  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  40437516 aaattaaaataattaataggatctacggtggaccacttttaaggttggtc 40437565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 43202309 - 43202240
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccac 144  Q
    |||| ||||||  ||| ||||| |||||| |||||||||||||||||||||||||||||||||| |||||    
T  43202309 aaaaaatcaaacagtttaaatttaaataactaataggatctatggtggaccactcttaaggttgatccac 43202240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 45279889 - 45279735
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | ||||| || | |||| | | ||||||| |||||  ||||||||| || ||||  || |||||||| ||||||||      
T  45279889 agatcgaatggttaaaattaacaaaattattaaggtctacgatagaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtcg 45279792  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||||| |||||| |  |||| ||||||||||||||  ||||| ||||||||    
T  45279791 ggatttatttgccaaacgaaaaaaaacttgagggaccaaaacgtacgttttattaat 45279735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 17339535 - 17339594
Alignment:
Q  159 gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||| || |||||||||||||||||||||||||||  |||||||| ||||    
T  17339535 gagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaa 17339594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 42362662 - 42362732
Alignment:
Q  83 aaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatc 154  Q
    ||||| || ||||||||| ||||||||||||||||| || ||||||||||| ||||||||||| ||||||||    
T  42362662 aaatgattgaaattaaaa-aattaataggatctatgatgaaccactcttaatgttggtccaccatagacatc 42362732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 8571509 - 8571678
Alignment:
Q  66 cttttaaagaaa-agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagtta 164  Q
    ||||| |||||| ||||||||  ||| |||||||||   |||||| | | |||||||||||| | |||| ||||||||||| |||||||  || | ||||    
T  8571509 ctttttaagaaacagatcaaacagtttaaattaaaaagtttaataaggtatatggtggaccatttttaaagttggtccaccatagacat--ttggggtta 8571606  T
Q  165 aacttaaccg--tgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||| |  |  |||||||||||| |||||||| ||||| ||| |||||||||  ||||| ||||||||    
T  8571607 aacttaacagactagggatttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgttttattaat 8571678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 24305278 - 24305177
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||||| || || ||| ||| |||||||||||| ||| || || ||| ||||||||||||||| | | || ||||||||| ||||||||||| |||||    
T  24305278 atccaacgattttcttttaaaacaaaagatcaaatagttgaagtttaaaaaattaataggatctaagatagatcactcttaatgttggtccaccatagac 24305179  T
Q  152 at 153  Q
    ||    
T  24305178 at 24305177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 37400993 - 37400942
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||||||||    
T  37400993 aaaagatcaaacggtttatattaaaaaaattaataggatctatggtggacca 37400942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 21670283 - 21670221
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccact 128  Q
    ||||||||||||| | ||||||||||||||||||| |||||||| |   ||||||||||||||    
T  21670283 cttttaaagaaaaaaccaaatggttaaaattaaaaaaattaataaggcatatggtggaccact 21670221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 24069352 - 24069430
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| ||||||||||||||||||||| | ||| || | |||||||||||||||   ||| ||||||||||| |||||||    
T  24069352 aaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggtggaccacctataatgttggtccaccttagacat 24069430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 6398485 - 6398542
Alignment:
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||| || | |||||||||| ||||||||||||||| |||||||| ||||    
T  6398485 gttaaacttaacagtcatgatttatttgacaaacggaggaaaaaatgagggactaaaa 6398542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 7770781 - 7770882
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||||| | ||| ||||||  |||| ||||||||||||||||||||| | ||| || | ||||||| |||||||   ||| ||||||||||| |||||    
T  7770781 atccaacgatcctctttttaactaaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggaggaccacctataatgttggtccaccttagac 7770880  T
Q  152 at 153  Q
    ||    
T  7770881 at 7770882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 7796691 - 7796792
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||||| | ||| ||||||  |||| ||||||||||||||||||||| | ||| || | ||||||| |||||||   ||| ||||||||||| |||||    
T  7796691 atccaacgatcctctttttaactaaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggaggaccacctataatgttggtccaccttagac 7796790  T
Q  152 at 153  Q
    ||    
T  7796791 at 7796792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 7815972 - 7816073
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||||| | ||| ||||||  |||| ||||||||||||||||||||| | ||| || | ||||||| |||||||   ||| ||||||||||| |||||    
T  7815972 atccaacgatcctctttttaactaaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggaggaccacctataatgttggtccaccttagac 7816071  T
Q  152 at 153  Q
    ||    
T  7816072 at 7816073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 14840807 - 14840880
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||| |||| ||||||||| | |||||| || |||||||||| |||| |||| ||||||||||| |||||||    
T  14840807 atcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttggtccaccatagacat 14840880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 26696644 - 26696603
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  26696644 aggatttatttggcaaatggaggaaaaagtgagggaccaaaa 26696603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 30787604 - 30787645
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  30787604 aggatttatttggcaaacggaagaaaaagtgagggaccaaaa 30787645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 36938915 - 36938866
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaa 99  Q
    ||||||||||||||||||||| || |||| |||||| |||||||||||||    
T  36938915 tgatccaacggttctcctttttaaaaaaatatcaaagggttaaaattaaa 36938866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 37276140 - 37276201
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| ||||||||||||||||||||| | |||||| | ||||| ||| |||||    
T  37276140 cttttaaagaaaaaatcaaatggttaaaattaaaaaatttaatatggtctatagtgaaccac 37276201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 26697704 - 26697893
Alignment:
Q  43 acctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtcc 142  Q
    |||| |||||||||||  | ||| ||||||| || | ||| ||||||  ||||||||  ||||| |||| |||||||||||| |    ||| ||||||||    
T  26697704 accttcgtgatccaacactcctctttttaaaaaataaatcgaatggtataaattaaagaaattactagggtctatggtggactatatataatgttggtcc 26697803  T
Q  143 accgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||| || ||||  || | ||||||||||||  | |||||||||| | |||| ||| |||||| |||||||| ||||  ||||| ||||||||    
T  26697804 accataaacat--ttggggttaaacttaacaattaggatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaat 26697893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 39173333 - 39173277
Alignment:
Q  70 taaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    |||| ||||||||||| |||||||||||||| |||||||| | | ||||||||||||    
T  39173333 taaaaaaaagatcaaacggttaaaattaaaagaattaataaggtttatggtggacca 39173277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 28418916 - 28418877
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  28418916 gatttatttggcaaacggaggaaaaagtgagggactaaaa 28418877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 14030531 - 14030478
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccact 128  Q
    ||||||||||| |||| | ||||||| || ||||||||||||| ||||||||||    
T  14030531 aaaagatcaaacggtttatattaaaaaaaataataggatctatagtggaccact 14030478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 21962041 - 21962008
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaa 100  Q
    |||||||||||| |||||||||||||||||||||    
T  21962041 ttttaaagaaaaaatcaaatggttaaaattaaaa 21962008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 34617078 - 34617171
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    |||||||| | ||| ||||||  |||| ||||||||||||||||||||| | ||| || | |||| ||||||||||   ||| |||||||||||    
T  34617078 atccaacgatcctctttttaactaaaatatcaaatggttaaaattaaaaaatttagtaaggtctacggtggaccacctgtaatgttggtccacc 34617171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 39515432 - 39515331
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||||| | ||| ||||||  |||| |||||||||||||||||| || | ||| || | |||||| ||||||||   ||| ||||||||||| |||||    
T  39515432 atccaacgatcctctttttaactaaaatatcaaatggttaaaattataaaacttagtaaggtctatgatggaccacctataatgttggtccaccttagac 39515333  T
Q  152 at 153  Q
    ||    
T  39515332 at 39515331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 44606356 - 44606271
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||| ||||||||||| |||||||| ||||| | |||| | | |||||||||||||||   ||| |||||| |||| |||||||    
T  44606356 tttaaaaaaaagatcaaacggttaaaaataaaagatttaacaaggtctatggtggaccacctataaagttggttcaccttagacat 44606271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 8570229 - 8570173
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||||||||||| |||  |||| |||||||||||||  ||||| ||||||||    
T  8570229 ggatttatttggcaaacagagacaaaagtgagggaccaaaacgtacgttttattaat 8570173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 28735238 - 28735151
Alignment:
Q  39 atacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    |||||||| | |||||||||| | ||| |||| || ||||||||||| || ||||||| ||| |||||||| | |||||| ||||||||    
T  28735238 atacacctgcatgatccaacgatcctcttttttaa-aaaagatcaaagggataaaattgaaaaaattaatatggtctatgatggaccac 28735151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 35800878 - 35800934
Alignment:
Q  70 taaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    |||| ||||||||||| |||||||||||||| |||| ||| | | ||||||||||||    
T  35800878 taaaaaaaagatcaaacggttaaaattaaaagaattgataaggtttatggtggacca 35800934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 11317204 - 11317429
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||||||||||||||||  | |||| |||||||||||| |||||||||||  ||||||| || ||| || |||| | || |||||||||||||||||    
T  11317204 ttaagtgttgatggttcaacctaagataaaatacacctacgggatccaacggtcatcctttttaaaaaatgaccaaacgatttaaattaaaataattaat 11317303  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattga 208  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  11317304 aggatctatggtagaccactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggatttatttgccaaacggaggaaaaattga 11317403  T
Q  209 gggaccaaaagatacgtgttattaat 234  Q
    |||||||||| ||| || ||||||||    
T  11317404 gggaccaaaatatatgttttattaat 11317429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 42641697 - 42641921
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||||||| ||||||||| | |||| |||||||||||||||||||||| ||||| ||| ||| |||||||||||  ||| |||||||||||||||||    
T  42641697 ttaagtgttgaaggttcaacgtaagataaaatacacctacgtgatccaacgattctcttttaaaaaaaaagatcaaacagtttaaattaaaataattaat 42641796  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattga 208  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||| |||||||  ||||||||||||||||||||||||  ||||| ||     
T  42641797 aggatctatggtagaccactcttaaggttggcccaccatagacatcatttgggttgaacttaattgtgaggatttatttggcaaacgga-aaaaaagtgg 42641895  T
Q  209 gggaccaaaagatacgtgttattaat 234  Q
    ||||||||||| | ||| ||||||||    
T  42641896 gggaccaaaaggtgcgttttattaat 42641921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 32469428 - 32469220
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||||||||||||||| | | |||| |||||||||| |||||| |||||| |||| |||||  |||| |||||| |||| |||||||||||||||||    
T  32469428 ttaagtgttgatggttcaatgtaagatacaatacacctatgtgatctaacggtcctccatttaat-aaaatatcaaagggtttaaattaaaataattaat 32469330  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattga 208  Q
    ||||||||| ||||||||||||||| ||||||||||| || |||| ||||||||||||||||||  | |||||||||||||| ||||||||||||| |||    
T  32469329 aggatctatagtggaccactcttaaagttggtccaccatatacataatttgagttaaacttaactataaggatttatttggc-aacggaggaaaaagtga 32469231  T
Q  209 gggaccaaaag 219  Q
     ||||||||||    
T  32469230 aggaccaaaag 32469220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 43033297 - 43033137
Alignment:
Q  72 aagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgag-ttaaactta 170  Q
    |||||| ||||| | |||| |||||||||||||||||||| | ||||||||||||||||||||||||||| ||| |||||||   ||||| |||||||||    
T  43033297 aagaaatgatcacaaggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatagacat---ttgaggttaaactta 43033201  T
Q  171 accgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||   ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  43033200 acatcgaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaat 43033137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 29219595 - 29219456
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtgag 178  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| | |||||||||||| ||  |    
T  29219595 atcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgg 29219496  T
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||  |||||||| ||||    
T  29219495 gatttatttggcaaacggaggaaaaggtgagggactaaaa 29219456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 29332894 - 29332755
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtgag 178  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| | |||||||||||| ||  |    
T  29332894 atcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgg 29332795  T
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||  |||||||| ||||    
T  29332794 gatttatttggcaaacggaggaaaaggtgagggactaaaa 29332755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 218
Target Start/End: Original strand, 18616885 - 18617051
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||| |||| || |||| |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||  ||||||||| |||||    
T  18616885 atccaatggttctcttttttaaaaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagactggtccaccatagac 18616983  T
Q  152 atcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||| | |||||||||||  ||  ||||||||||||||||||||||||||  |||||||| ||||    
T  18616984 atcatttggggttaaacttaatagttgggatttatttggcaaacggaggaaaaggtgagggactaaaa 18617051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 203
Target Start/End: Original strand, 6030372 - 6030500
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    ||||||||||| |||| |||||||||  |||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||| ||||| |    
T  6030372 aaaagatcaaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttggtccaccgtagacatcatttgggttaaagttaactg 6030471  T
Q  175 tgaggatttatttggcaaacggaggaaaa 203  Q
    |   |||||||||||||||  ||||||||    
T  6030472 ttgagatttatttggcaaatagaggaaaa 6030500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 43034400 - 43034532
Alignment:
Q  102 aattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgag---ttaaacttaaccgtgaggatttatttggcaaacggag 198  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||||||   |||||   ||||||||||| | || |||||||||| |||||||||    
T  43034400 aattaataggatctatggtggaccactcttaaagttgatccaccatagacat---ttgagaggttaaacttaacagcgaagatttatttgacaaacggag 43034496  T
Q  199 gaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||| |||||||||||||| ||||| ||||||||    
T  43034497 gaaaaagtgagggaccaaaaggtacgttttattaat 43034532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 1085290 - 1085431
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    |||| |||||| |||  |||||||||||||||||||||||||||||| ||||||||||| | || |||||| || |||||||||   ||||||||||| |    
T  1085290 aaaaaatcaaacggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacgg 1085389  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |   |||||||||||||||||||||||||  |||||||||||||    
T  1085390 ttgtgatttatttggcaaacggaggaaaa--tgagggaccaaaa 1085431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 17459468 - 17459308
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaacc 173  Q
    |||| |||||| |||| |||||| |||||||||||||||||||| | || |||| ||||| || ||||||| |||||||||||| | |||||||||||      
T  17459468 aaaaaatcaaacggtttaaattataataattaataggatctatgttagatcacttttaagattcgtccaccatagacatcatttggggttaaacttaaaa 17459369  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    || || ||||||||||||||||||||||||| ||||||||  |||  ||||| ||||||||    
T  17459368 gtcagaatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaat 17459308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 211
Target Start/End: Complemental strand, 11547870 - 11547737
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtg 176  Q
    |||||||| |||| |||||| || | |||||| ||||||||||||||||||| |||||||||||||   |||||||||||| | |||||||||||| ||     
T  11547870 agatcaaacggtttaaattataa-atttaatacgatctatggtggaccactcctaaggttggtccatgatagacatcatttggggttaaacttaacagtc 11547772  T
Q  177 aggatttatttggcaaacggaggaaaaattgaggg 211  Q
    |||||||||||| |||||| |||||||| ||||||    
T  11547771 aggatttatttgacaaacgaaggaaaaaatgaggg 11547737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 7437743 - 7437822
Alignment:
Q  155 atttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||| |||||||||||  || ||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||    
T  7437743 atttgggttaaacttaattgttaggatttattttgtaaacggaggaaaaattgagggaccaaaatatacgttttattaat 7437822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 4920921 - 4921039
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactctta 132  Q
    |||| ||||||||| ||| |||||| | | ||||||||||| ||||  ||||| |||| |||||| ||||||||||||||| |||||||||||| | |||    
T  4920921 gataaaatacacctgcgtaatccaatgatcctccttttaaaaaaaa--tcaaacggtttaaattagaataattaataggatttatggtggaccattttta 4921018  T
Q  133 aggttggtccaccgtagacat 153  Q
    | ||||||| ||| |||||||    
T  4921019 aagttggtctaccatagacat 4921039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 17460635 - 17460745
Alignment:
Q  122 gaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagat 221  Q
    ||||||| ||||| |||||||||| |||||||  ||  ||||||| ||||| ||  |||||||||||| ||||||||||||| ||||||||||||||  |    
T  17460635 gaccacttttaagattggtccaccatagacat--ttaaagttaaagttaacggtcgggatttatttgggaaacggaggaaaatttgagggaccaaaacgt 17460732  T
Q  222 acgtgttattaat 234  Q
    |||| ||||||||    
T  17460733 acgttttattaat 17460745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 35903720 - 35903665
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct 130  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  35903720 aaaagatcaaacggtttaaattaaaatatttaataggatctatggtggaccactct 35903665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 8320965 - 8320895
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtaga 150  Q
    |||||| |||| ||||||||||||||||||  |||||||||||||| ||||||||| ||||||||| ||||    
T  8320965 atcaaacggtttaaattaaaataattaatataatctatggtggaccgctcttaaggatggtccaccataga 8320895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 32470482 - 32470605
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | |||| | ||||||| | ||||||||  |||||| |||||||  || |||||||||||||| |       
T  32470482 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccatttttaaggtttatccaccatagacat--ttggagttaaacttaacagccg 32470579  T
Q  178 ggatttatttggcaaacggaggaaaa 203  Q
    ||||||||||| ||||||||||||||    
T  32470580 ggatttatttgacaaacggaggaaaa 32470605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 34513448 - 34513522
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtc 141  Q
    ||||||| || |||||||| |||| ||||||||| |||||||| | ||||||||||| |||||||||||||||||    
T  34513448 ttttaaaaaacagatcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttggtc 34513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 11316118 - 11315988
Alignment:
Q  102 aattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaa 201  Q
    |||||||| | |||| ||||||||| | ||||||||| |||||| |||||||  || || ||||||||||| |   ||||||||||||||||||||||||    
T  11316118 aattaataaggtctacggtggaccatttttaaggttgatccaccatagacat--ttggaattaaacttaacagccgggatttatttggcaaacggaggaa 11316021  T
Q  202 aaattgagggaccaaaagatacgtgttattaat 234  Q
    ||  ||||||||  |||  ||||| ||||||||    
T  11316020 aacctgagggacttaaacgtacgttttattaat 11315988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 28562713 - 28562870
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct-taaggttggtccaccgtagacatcatttgagttaaacttaacc 173  Q
    ||||||||||| ||||||||||  || | |||||| | |||||||||||| | ||| ||| ||||||||||| || | ||  || |  |||||||||||     
T  28562713 aaaagatcaaagggttaaaattggaaaatttaataaggtctatggtggacta-tctataatgttggtccaccatatatat--ttgggattaaacttaaca 28562809  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||  ||||||||||| ||||||||||||||| |||||||||||||| || || ||||||||    
T  28562810 gtctggatttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaat 28562870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 6028926 - 6028787
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | ||||| || | |||| | ||||||||| |||||  ||||||||| || ||||  || |||||||| ||||||||      
T  6028926 agatcgaatggttaaaattaacaaaattattaaggtctacgatggaccacttttaagactggtccaccatatacat--ttagagttaaagttaaccgtcg 6028829  T
Q  178 gga-tttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    | | ||||||||||||||| || |||| ||||||||||||||    
T  6028828 gaaatttatttggcaaacgaagaaaaacttgagggaccaaaa 6028787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 28611145 - 28611233
Alignment:
Q  63 ctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| |||| |||||| |||| |||||||| ||||||||||||||||| |||||||| | |||| || |||||||| |||||||    
T  28611145 ctccttttaaaaaaaa-atcaaacggtttaaattaaa-taattaataggatctatagtggaccatttttaaagtcggtccaccatagacat 28611233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 34464178 - 34464023
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||||||  ||| ||||||||| |  ||||| | ||||||||||||||||||||||||||||| ||  |||||||  || | |||||||||||| || |    
T  34464178 agatcaaacagtttaaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgatagacat--ttggggttaaacttaacagtca 34464081  T
Q  178 g-gatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    | ||||||||||   |||||||| |||  ||| ||||||||||||  || ||||||||    
T  34464080 gagatttatttgattaacggaggcaaacctgatggaccaaaagatttgttttattaat 34464023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 25570749 - 25570854
Alignment:
Q  48 cgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgt 147  Q
    |||||||||| |||| || ||||||| |||||||||||   |||||| ||||||| |||||| | |||||||||||||||   ||| |||||| |||| |    
T  25570749 cgtgatccaatggttttcattttaaaaaaaagatcaaacctttaaaaataaaatatttaataaggtctatggtggaccacctataaagttggttcacctt 25570848  T
Q  148 agacat 153  Q
    ||||||    
T  25570849 agacat 25570854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 16295150 - 16295190
Alignment:
Q  105 taataggatctatggtggaccactcttaaggttggtccacc 145  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  16295150 taataggatctatggtggaccactgttaaggttggtccacc 16295190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 34513020 - 34512885
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgagg 179  Q
    ||||||| ||| ||||||||| | |||||| | | |||||||||||||||||| ||||| |||||| || |   ||||   |||||||||||| || | |    
T  34513020 atcaaatagtttaaattaaaaaatttaataaggtatatggtggaccactcttatggttgatccaccatata---cattaaggttaaacttaacagtcatg 34512924  T
Q  180 atttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||| | |||||||| ||| |||||||| |||||    
T  34512923 atttatttgactaacggaggcaaatttgagggatcaaaa 34512885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 4512325 - 4512263
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccact 128  Q
    ||||||||||||| |||||||||| |||||||||| |||||||| |   ||||||||||||||    
T  4512325 cttttaaagaaaaaatcaaatggtcaaaattaaaaaaattaataaggcatatggtggaccact 4512263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 28561477 - 28561423
Alignment:
Q  180 atttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||| |||||| |||||||  |||||||||||||||||||| ||||||||    
T  28561477 atttatttgacaaacgtaggaaaaggtgagggaccaaaagatacgttttattaat 28561423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 30748692 - 30748630
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggtt 137  Q
    |||||||||||   || |||||||||||||||||| |||||||||||  ||||||||||||||    
T  30748692 aaaagatcaaacaatttaaattaaaataattaatatgatctatggtgtgccactcttaaggtt 30748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 1083197 - 1083059
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | ||||   | ||||||| ||||||||| |||||| |||| ||  || |||||||| |||||  |      
T  1083197 agatcgaatggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccatagatat--ttagagttaaagttaacacttg 1083100  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||| ||||||||||||| ||||  ||| |||||||||    
T  1083099 ggatttaattggcaaacggagaaaaagatgacggaccaaaa 1083059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 30749228 - 30749293
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggt 140  Q
    ||||||||| | |||| ||||||||||||||||||||  || | ||| ||||||||||||||||||    
T  30749228 aaaagatcatacggtttaaattaaaataattaataggccctgtagtgaaccactcttaaggttggt 30749293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 2277366 - 2277421
Alignment:
Q  69 ttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggac 124  Q
    ||||| ||||||||||| |||||||||| ||| |||||||| | ||||||||||||    
T  2277366 ttaaaaaaaagatcaaagggttaaaattgaaaaaattaataaggtctatggtggac 2277421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 7436594 - 7436537
Alignment:
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaag 219  Q
    |||| ||||||| || |||||||||||| |||||||| |||||||||| ||||||||||    
T  7436594 gttagacttaactgttaggatttatttgacaaacggaagaaaaattga-ggaccaaaag 7436537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 23177891 - 23177833
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||||| |||||||||||||||||| || | |||||| |||||| |||| ||||    
T  23177891 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaacca 23177833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 23589148 - 23589090
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||||| |||||||||||||||||| || | |||||| |||||| |||| ||||    
T  23589148 tttaaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaacca 23589090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 26205223 - 26205145
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| ||||||||||||||||| ||| |||||||| |   |||||||||||||| |||||  |||| |||| |||||||    
T  26205223 aaaaaatcaaatggttaaaatttaaaaaattaataaggcatatggtggaccacttttaagtatggttcaccttagacat 26205145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 34467719 - 34467641
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| ||||||  ||| ||||||||| | |||||| | | ||||||||||||||||||||||| ||||| | |||||||    
T  34467719 aaaatatcaaacagtttaaattaaaaaacttaataaggtttatggtggaccactcttaaggtttgtccatcatagacat 34467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 7983592 - 7983653
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| |||||| || | ||||| ||| | |||||| |||||||||||||||||    
T  7983592 cttttaaagaaaaaatcaaaaggatgaaatttaaaaatttaataagatctatggtggaccac 7983653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 12853105 - 12853044
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||| | ||||||||||||||||| ||| | |||||| | ||||||||| |||||    
T  12853105 cttttaaagaataaatcaaatggttaaaattcaaaaatttaatacggtctatggtgaaccac 12853044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 14714711 - 14714650
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| |||||||||||  |||||||| |||||||| |   |||||||||||||    
T  14714711 cttttaaagaaaaaatcaaatggttgcaattaaaaaaattaataaggcgtatggtggaccac 14714650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 16290697 - 16290742
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggt 120  Q
    ||||||| ||| | || |||||||||||||||||||||||||||||    
T  16290697 aaaagattaaacgatttaaattaaaataattaataggatctatggt 16290742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 36010681 - 36010632
Alignment:
Q  185 tttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||||| |||||||| |||||||| |||| |||||| ||||||||    
T  36010681 tttggcaaacgaaggaaaaagtgagggactaaaatatacgttttattaat 36010632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 7037200 - 7037157
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaa 94  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||    
T  7037200 tgatccaacggt-ctccttttaaaaaaaagatcaaacggttaaaa 7037157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 13029500 - 13029453
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatcta 116  Q
    |||||| ||| ||||||||||||||| ||||||||||||||| ||||||    
T  13029500 tttaaaaaaacgatcaaatggttaaa-ttaaaataattaataagatcta 13029453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 15850540 - 15850643
Alignment:
Q  50 tgatccaacggttctccttt-taaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgta 148  Q
    ||||| ||| |||||| ||| |||| ||||||||||| |||||||||||||| |  || || |||||||||||||||||   ||| |||||| |||| ||    
T  15850540 tgatctaactgttctcatttataaacaaaagatcaaagggttaaaattaaaa-atctattaagatctatggtggaccacctataatgttggttcacctta 15850638  T
Q  149 gacat 153  Q
    |||||    
T  15850639 gacat 15850643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 7e-70; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 38242352 - 38242577
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||||||||||||||||| | |||| |||||| |||||||||||||||||  | |||| ||  |||| |||||| |||| |||||||||||||||||    
T  38242352 ttaagtgttgatggttcaacgtaagataaaatacatctacgtgatccaacggtcatgctttaaacaaaaaaatcaaacggtttaaattaaaataattaat 38242451  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattga 208  Q
    || || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||| |||    
T  38242452 agaatttatggtggaccactcttaaggttggtccaccatagacatcatttgagttaaacttaactgtgaggatttatttggcaaacagataaaaaagtga 38242551  T
Q  209 gggaccaaaagatacgtgttattaat 234  Q
    ||||||||||| ||||| ||||||||    
T  38242552 gggaccaaaaggtacgttttattaat 38242577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 10732028 - 10732174
Alignment:
Q  71 aaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaactta 170  Q
    |||||||| |||||| |||  |||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||||    
T  10732028 aaagaaaa-atcaaacggtcgaaattaaaataattaataggatctatggtggaccgctctaaaggttggtccaccatagacatcatttgggttaaactta 10732126  T
Q  171 accgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||  | |||||||||| |||||||||||||  |||||||| ||||    
T  10732127 accgtcggaatttatttggtaaacggaggaaaatgtgagggactaaaa 10732174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 35371144 - 35371021
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||| ||||||| |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  35371144 atccaatggttctctttttaaaaaaaaaatcaaaaagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaac 35371045  T
Q  152 atcatttgagttaaacttaaccgt 175  Q
    |||||||| | |||||||||||||    
T  35371044 atcatttgggctaaacttaaccgt 35371021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 234
Target Start/End: Complemental strand, 3208721 - 3208539
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||  ||||||| | || |||||| |||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || |     
T  3208721 atccaatggttctatttttaaaaataaaatcaaacggtttaaattataataattaataggatttatggtggaccactcttaaggttggtccaccata-at 3208623  T
Q  152 atcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||| | |||||||||||| || |||||||||||| ||||||||||||||| | ||||| |||||  ||||| ||||||||    
T  3208622 atcatttggggttaaacttaacggtaaggatttatttgacaaacggaggaaaaaataagggatcaaaacgtacgttttattaat 3208539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 194
Target Start/End: Complemental strand, 26886508 - 26886367
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||| ||||||||| |||| |||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||    
T  26886508 atccaatggttc-ccttttaaaaaaaaaatcaaacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcaccgtaaac 26886410  T
Q  152 atcatttga-gttaaacttaaccgtgaggatttatttggcaaac 194  Q
    ||||||||| ||| || ||||| ||  |||||||||||||||||    
T  26886409 atcatttgaggttgaaattaacagt-cggatttatttggcaaac 26886367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 218
Target Start/End: Original strand, 41264540 - 41264698
Alignment:
Q  59 ggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt 158  Q
    ||||||| ||||||| |||| |||||| |||  |||||||||||||||||||||||||||||| ||||||||||| | || |||||| || |||||||||    
T  41264540 ggttctctttttaaaaaaaa-atcaaacggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccataaacatcattt 41264638  T
Q  159 gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
       ||||||||||| ||   |||||||||||||||||||| ||||  ||||||| |||||    
T  41264639 ttattaaacttaacggttgagatttatttggcaaacggagaaaaaggtgagggatcaaaa 41264698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 27841625 - 27841732
Alignment:
Q  88 gttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttattt 187  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| ||||   |||||||||||| |  | ||||||||    
T  27841625 gttaaaattaaaataattattaggatctatggtggaccactcttaaggttggtccaccataaacataatttagattaaacttaaccatcggaatttattt 27841724  T
Q  188 ggcaaacg 195  Q
    | ||||||    
T  27841725 gacaaacg 27841732  T

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Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 53614187 - 53614318
Alignment:
Q  87 ggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtgaggatttat 185  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||| || |||||| ||||||| |||| | ||||||||||| ||   ||||||||    
T  53614187 ggttgaaattaaaataattactaggatctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaa-cgcctggatttat 53614285  T
Q  186 ttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||  ||||||||  |||||||| ||||    
T  53614286 ttggcaaatagaggaaaatgtgagggactaaaa 53614318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 48083465 - 48083362
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtag 149  Q
    ||||||||| || ||| |||||||  | ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| || |||| |||    
T  48083465 tgatccaacagtcctcattttaaaatatagatcgaatggtttaaattaaaataattaataggatctatggtagaccactcttaaggttagtgcaccatag 48083366  T
Q  150 acat 153  Q
    ||||    
T  48083365 acat 48083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 53622830 - 53622748
Alignment:
Q  122 gaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaa 203  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||||||||||  ||||||| ||||||||||||||||||    
T  53622830 gaccactcttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaa 53622748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 10338951 - 10338886
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggt 140  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10338951 aaaaaatcaaacagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggt 10338886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 14745080 - 14745173
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    ||||||| || ||| |||||||  | ||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14745080 atccaacagtcctcattttaaaatatagatcaaacagtttaaattaaaataattaataggatctatggtgaaccactcttaaggttggtccacc 14745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 34819204 - 34819285
Alignment:
Q  92 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaac 172  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||||| | ||||||||||||    
T  34819204 aaattaaaataagtaataggatctatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaac 34819285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 232
Target Start/End: Original strand, 12107857 - 12108042
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtag 149  Q
    ||||| || ||| ||||||| | | ||||||||||| |||| | ||||||| ||  |||||| |||||||||||||||| |||||||||||||||| ||     
T  12107857 tgatctaatggtcctcctttaataaaaaagatcaaacggtttatattaaaaaaaa-aatagggtctatggtggaccacttttaaggttggtccaccataa 12107955  T
Q  150 acatcattt-gagttaaacttaa---ccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttatta 232  Q
    | ||||||| | |||||| ||||   ||||||    ||||||||||||||||||||||| ||||||||||||| ||| || ||||||    
T  12107956 atatcatttggggttaaatttaacacccgtgatttattatttggcaaacggaggaaaaagtgagggaccaaaatatatgttttatta 12108042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 53624243 - 53624422
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct-taaggttggtccaccgtaga 150  Q
    |||||||||||||| || | || ||||||||||| |||||||||| ||| |||||||| | |||||||||||| | ||| ||| ||||||||||| || |    
T  53624243 atccaacggttctctttcttaaaaaaagatcaaaaggttaaaattgaaa-aattaataaggtctatggtggacta-tctataatgttggtccaccatata 53624340  T
Q  151 catcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||  || | ||||||| |||||||  ||||||||||||||||| ||| ||||| |||| ||||||||  ||||| ||||||||    
T  53624341 cat--ttggggttaaacctaaccgtctggatttatttggcaaaccgagaaaaaagtgagtgaccaaaatgtacgttttattaat 53624422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 53194450 - 53194574
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||||| |||||||| || | |||||||||||| | ||||||| |||| |  || ||||||| ||||||||||| |||| ||| |||||||||||||    
T  53194450 ttaagtgttcatggttcatcgtaagatagaatacacatgcgtgatctaacgatcttcattttaaa-aaaagatcaaacggtttaaaataaaataattaat 53194548  T
Q  109 aggatctatggtggaccactcttaag 134  Q
    || |||||||||||| |||| |||||    
T  53194549 agaatctatggtggatcacttttaag 53194574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 218
Target Start/End: Complemental strand, 10731097 - 10730956
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    |||||||| |||| |||||||||| | |||||||| | | |||| | ||||||| ||||||||||| |||| |||||||  ||  ||||||| ||||| |    
T  10731097 aaaagatcgaatgattaaaattaacaaaattaataaggtatatgatagaccacttttaaggttggttcaccatagacat--ttgaagttaaagttaacag 10731000  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |  ||||||||||||||||||||| ||||| ||| |||||||||    
T  10730999 tcgggatttatttggcaaacggagaaaaaagtgaaggaccaaaa 10730956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 10301147 - 10301072
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtaga 150  Q
    |||| ||||||  ||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  10301147 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggatcactcttaaggttggttcaccataga 10301072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 18197277 - 18197202
Alignment:
Q  159 gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||| ||||| ||  ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  18197277 gagttaaagttaacggtctggatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaat 18197202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 3455529 - 3455597
Alignment:
Q  76 aaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    |||||||||| |||| | |||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  3455529 aaagatcaaagggttgagattaaa-taattaatatgatctatggtggaccactcttaaggttggtccacc 3455597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 40244395 - 40244242
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||||||  ||||||||||| | |||||||| | |||| | ||||||||| ||||| |||||||||| ||||||   ||  ||||||| ||||| || |    
T  40244395 agatcaaagagttaaaattaacaaaattaataaggtctacgatggaccacttttaagtttggtccaccatagacac--ttgaagttaaagttaactgtca 40244298  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
      ||| |||||||||||||||||||| ||||||||||||||  ||||| ||||||||    
T  40244297 aaatt-atttggcaaacggaggaaaatttgagggaccaaaatgtacgttttattaat 40244242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 42685097 - 42684947
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaa 166  Q
    ||||||| || |||||||| |||| ||||||||| | |||||| | | |||||||||||||||||||| ||||| |||| |||||||  || | ||||||    
T  42685097 ttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatagacat--ttggggttaaa 42685000  T
Q  167 cttaaccgt-gaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||| ||  ||||||||||||| ||||  || ||||| |||||||| ||||    
T  42684999 cttaacagtcaaggatttatttggtaaacatagaaaaaaatgagggactaaaa 42684947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 38241114 - 38240992
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | |||| | ||||||| | ||||| ||||| |||| |||||||  || |||||||||||||| |       
T  38241114 agatcgaatggttaaaattaacaaaattaataagctctacgatggaccatttttaag-ttggttcaccatagacat--ttggagttaaacttaacagccg 38241018  T
Q  178 ggatttatttggcaaacggaggaaaa 203  Q
    ||||||||||||||||||||||||||    
T  38241017 ggatttatttggcaaacggaggaaaa 38240992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 49379926 - 49379837
Alignment:
Q  63 ctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| |||| ||||||  ||| |||||| |||||||||||||||||||||||||||| | |||| || |||||||| |||||||    
T  49379926 ctccttttaaa-aaaatatcaaacagtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat 49379837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 11219649 - 11219588
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| ||||||||||||||||||||| | |||||| ||||||||||| |||||    
T  11219649 cttttaaagaaaaaatcaaatggttaaaattaaaaaatttaatacgatctatggtgaaccac 11219588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 36175475 - 36175313
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    |||| ||| ||||||| ||||||||  |||||||||||| |||||||||| |    ||| |||| |||| | |||||||  || | |||||||||||| |    
T  36175475 aaaaaatcgaatggtttaaattaaagaaattaataggatatatggtggactatatataatgttgatccatcatagacat--ttggggttaaacttaacag 36175378  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaatgatga 239  Q
    |  ||||||||||||||||||||| ||||| ||||| |||||||  ||||| | |||||| ||||    
T  36175377 tccggatttatttggcaaacggagaaaaaaatgaggcaccaaaacgtacgtttcattaattatga 36175313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 13621144 - 13621055
Alignment:
Q  63 ctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| |||| || ||| |||| |||||| |||||||||||||||||||||||||||| | || | || |||||||| |||||||    
T  13621144 ctccttttaaaaaaaa-attaaacggtttaaattagaataattaataggatctatggtggaccattttttaagtcggtccaccatagacat 13621055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 20336528 - 20336702
Alignment:
Q  43 acctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct-taaggttggtc 141  Q
    |||| |||||||||||||||||| ||| ||| || | ||  ||||||| ||||||||  |||||||| | |||||||||||| | ||| ||| |||||||    
T  20336528 accttcgtgatccaacggttctcttttaaaaaaataaattgaatggtttaaattaaataaattaataaggtctatggtggacta-tctataatgttggtc 20336626  T
Q  142 caccgtagacatcatttgagttaaacttaaccgtga-ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    || | |||||||  || |||||||||||||| || | | ||||||||| | |||||||  ||| ||||||||||||||    
T  20336627 caacatagacat--ttggagttaaacttaacagtcatgaatttatttgactaacggagacaaacttgagggaccaaaa 20336702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 27838128 - 27837991
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||| ||||||||||| | |||||||| | |||| | ||||||||| ||||  |||||| ||| |||||||   ||||  | || ||||| || |    
T  27838128 agatcgaatagttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtctaccatagacat---ttgaagttaagttaacagtca 27838032  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||||||||||||  |||||||| ||||    
T  27838031 ggatttatttggcaaacggaggaaaaggtgagggactaaaa 27837991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 35372066 - 35372203
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | |||| | ||||||||| ||||  |||||||| | |||||||   ||||  | || ||||| || |    
T  35372066 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtccaacatagacat---ttgaagttaagttaacagtaa 35372162  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||| ||||||||  |||||||| ||||    
T  35372163 ggatttatttggcaaacagaggaaaaggtgagggactaaaa 35372203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 44602936 - 44602997
Alignment:
Q  64 tccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    |||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||| |||||    
T  44602936 tccttttaaataaaagatcaaacggtttaaattaaaa-aattaataggatctatggtagacca 44602997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 53194774 - 53194931
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct-taaggttggtccaccgtagacatcatttgagttaaacttaacc 173  Q
    |||| |||||||||||||||| |||| |||||||    |||||||||||| | ||| ||| ||  ||||||| |||||||  |||||||||||||||||     
T  53194774 aaaaaatcaaatggttaaaataaaaa-aattaatgaagtctatggtggacta-tctataatgtgagtccaccatagacat--tttgagttaaacttaaca 53194869  T
Q  174 gtga-ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |  | ||||||||||||||||  ||||||||| |||||||||||||  ||||| ||||||||    
T  53194870 gacatggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaat 53194931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 5123189 - 5123301
Alignment:
Q  14 tgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggat 113  Q
    |||||||||||||  | |||||| |||| ||||  | |||||||||||||   | ||||| || ||||||||||||||||||||||| |||||||| | |    
T  5123189 tgttgatggttcactgaatgatacaatagacctctgcgatccaacggttcatgtgttaaaaaatagatcaaatggttaaaattaaaa-aattaataaggt 5123287  T
Q  114 ctatggtggaccac 127  Q
    ||||||| ||||||    
T  5123288 ctatggtagaccac 5123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 7270536 - 7270467
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccac 144  Q
    |||||||||||  |||||| | |||| | |||||| |||||||||| |||||||||||||||||||||||    
T  7270536 aaaagatcaaacagttaaagtcaaaaaagttaataagatctatggtagaccactcttaaggttggtccac 7270467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 34818295 - 34818141
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| || |||||||||||| | |||||||| | |||||| | || || | ||||||||| || ||| |||||||  ||  ||||||| |||||  |      
T  34818295 agatcgaacggttaaaattaacaaaattaataaggtctatgatagatcatttttaaggttgatcaaccatagacat--ttaaagttaaagttaactattg 34818198  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||| |||||||||  ||||||||||||  |||||| ||||||||    
T  34818197 ggatttatttggcaaatggaggaaaatctgagggaccaaatcatacgttttattaat 34818141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 53187686 - 53187630
Alignment:
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaa 217  Q
    |||||||||||| ||  |||||||||||||||||||| |||||| ||||||||||||    
T  53187686 gttaaacttaacggtagggatttatttggcaaacggaagaaaaagtgagggaccaaa 53187630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 7483422 - 7483465
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaata 109  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  7483422 cttttaaagaaaaaatcaaatggttaaaattaaaaaaattaata 7483465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 11224776 - 11224815
Alignment:
Q  106 aataggatctatggtggaccactcttaaggttggtccacc 145  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  11224776 aatatgatctatggtggaccactcttaaggttggtccacc 11224815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 53808558 - 53808476
Alignment:
Q  44 cctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||| |||||||||| ||||| |||||||||||| |||||| |||||||||| ||| | |||||| | | |||||||||||||    
T  53808558 cctacatgatccaacgattctc-ttttaaagaaaaaatcaaagggttaaaatttaaaaatttaataaggtttatggtggaccac 53808476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 17349978 - 17350033
Alignment:
Q  44 cctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaa 100  Q
    ||||| |||| ||||||| ||| |||||||||||| |||||||||||||||||||||    
T  17349978 cctacatgattcaacggtcctc-ttttaaagaaaaaatcaaatggttaaaattaaaa 17350033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 53420527 - 53420371
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg--t 175  Q
    ||||||||  ||| |||||||||   |||||| | ||||||||||| |||| |||| ||||||||||| |||||||  ||   |||||||||||  |  |    
T  53420527 agatcaaacagtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatagacat--ttgtggttaaacttaatagact 53420430  T
Q  176 gaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
      |||||||||||  |||||||| ||||| |||||||||||||  ||||| ||||||||    
T  53420429 agggatttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaat 53420371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 53421766 - 53421822
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||||||||||| ||| ||||| |||||||||||||  ||||| ||||||||    
T  53421766 ggatttatttggcaaacagagaaaaaagtgagggaccaaaacgtacgttttattaat 53421822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 18458663 - 18458702
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  18458663 gatttatttggcaaacggaggaaaaagtgagggactaaaa 18458702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 218
Target Start/End: Original strand, 20314642 - 20314809
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct-taaggttggtccaccgta 148  Q
    |||||||||||| ||| ||| ||| || | ||||||||||| ||||||||  |||||||| | |||||||||||| | ||| ||| ||||||| | | ||    
T  20314642 tgatccaacggtcctcttttgaaaaaataaatcaaatggtttaaattaaataaattaataaggtctatggtggacta-tctataatgttggtctaacata 20314740  T
Q  149 gacatcatttgagttaaacttaaccgtga-ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||  || |||||||||||||| || | | ||||||||| | ||| |||  ||| ||||||||||||||    
T  20314741 gacat--ttggagttaaacttaacagtcatgaatttatttgactaacagagacaaacttgagggaccaaaa 20314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 28909510 - 28909561
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||||   ||| ||||||||| |||||||||||||||||||||||||    
T  28909510 aaaagatcaaccagtttaaattaaaaaaattaataggatctatggtggacca 28909561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 126
Target Start/End: Complemental strand, 37415196 - 37415157
Alignment:
Q  87 ggttaaaattaaaataattaataggatctatggtggacca 126  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  37415196 ggttaaaattaaaagaattaataagatctatggtggacca 37415157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 50809531 - 50809492
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  50809531 gatttatttggcaaacggaggaaaaagtgagggactaaaa 50809492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 50810840 - 50810879
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  50810840 gatttatttggcaaacggaggaaaaaatgagggactaaaa 50810879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 50865024 - 50864985
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  50865024 gatttatttggcaaacggaggaaaaaatgagggactaaaa 50864985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 50866331 - 50866370
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  50866331 gatttatttggcaaacggaggaaaaagtgagggactaaaa 50866370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 7821855 - 7821944
Alignment:
Q  38 aatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataa-ttaataggatctatggtggaccac 127  Q
    |||| |||||| ||||||||||||| ||  ||| || |||||||||||  ||||||||||||| || |||||||| |||||||| ||||||    
T  7821855 aatagacctacatgatccaacggttttctatttcaaaaaaagatcaaacagttaaaattaaaaaaatttaatagg-tctatggtagaccac 7821944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 12106686 - 12106628
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaatg 235  Q
    ||||||||||||  |||||||| ||||| |||||||||||||  ||||| |||||||||    
T  12106686 aggatttatttgataaacggagaaaaaagtgagggaccaaaatgtacgttttattaatg 12106628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 21128135 - 21128057
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| ||||||||||||||||||||| | ||  || | |||||||||||||||   ||| ||||||||||| |||||||    
T  21128135 aaaatatcaaatggttaaaattaaaaaactttgtaaggtctatggtggaccacctataatgttggtccaccttagacat 21128057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 39133236 - 39133202
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaa 100  Q
    ||||||||||||| |||||||||||||||||||||    
T  39133236 cttttaaagaaaaaatcaaatggttaaaattaaaa 39133202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 40364505 - 40364395
Alignment:
Q  102 aattaataggatctatggtggaccactct-taaggttggtccaccgtagacatcatttgagttaaacttaaccgtga-ggatttatttggcaaacggagg 199  Q
    |||||||||| |||||||||||| | ||| ||| |||||| |||| |||||||  |||  ||||||||||||   || |||||||||||||||||||||     
T  40364505 aattaatagggtctatggtggacta-tctataatgttggttcaccatagacat--tttaggttaaacttaacaccgaaggatttatttggcaaacggaga 40364409  T
Q  200 aaaaattgagggac 213  Q
    ||||| ||||||||    
T  40364408 aaaaaatgagggac 40364395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 43346361 - 43346431
Alignment:
Q  83 aaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||||||||||||||| | ||| || | |||||||||||||||   ||| ||||||||||| |||||||    
T  43346361 aaatggttaaaattaaaaaatttagtaaggtctatggtggaccacctataatgttggtccaccttagacat 43346431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 8371439 - 8371378
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| |||||| |||||||||||||| | ||| || | || ||||||||||||    
T  8371439 cttttaaagaaaaaatcaaagggttaaaattaaaaaatttactaaggtccatggtggaccac 8371378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 32979307 - 32979246
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    |||||||||||   ||||||||||||||||||||| | |||||| | ||||||||| |||||    
T  32979307 cttttaaagaatcaatcaaatggttaaaattaaaaaatttaatacggtctatggtgaaccac 32979246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 37736089 - 37736142
Alignment:
Q  181 tttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||||| ||||| |||||||| ||||  ||||| ||||||||    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaat 37736142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 41263847 - 41263709
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | ||||   | ||||||| ||||||||| |||||| |||| ||  || |||||||| |||||  |      
T  41263847 agatcgaatggttaaaattaacaaaattaataaggtctagaatagaccacttttaaggttgatccaccatagatat--ttagagttaaagttaacacttg 41263750  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||| ||| ||||||||| ||||  ||| |||||||||    
T  41263749 ggatttaattgacaaacggagaaaaagatgacggaccaaaa 41263709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 26887506 - 26887595
Alignment:
Q  122 gaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggac 213  Q
    ||||||| ||||||||||| |||| |||| ||  ||  ||||||| |||||||| || |||||||||| |||| ||||||||  ||||||||    
T  26887506 gaccacttttaaggttggtacaccatagatat--ttgaagttaaagttaaccgtcagaatttatttgggaaacagaggaaaagatgagggac 26887595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 36176512 - 36176568
Alignment:
Q  179 gatttatttggcaaacggagg-aaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||| |||| ||||| ||||||||||||| |||| | ||||||||    
T  36176512 gatttatttggcaaacagaggaaaaaaatgagggaccaaaacatacattttattaat 36176568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 46369013 - 46368965
Alignment:
Q  83 aaatggttaaaattaaaataattaataggatctatggtggaccactctt 131  Q
    ||||| || |||||||||||||||||| ||| ||||||||| |||||||    
T  46369013 aaatgatttaaattaaaataattaatatgatatatggtggaacactctt 46368965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 43460660 - 43460884
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||||||||||||||| | | |||| |||| |||||||||||  |||||| |||| |||||  ||||||||||| |||| |||||||||||||||||    
T  43460660 ttaagtgttgatggttcaatgtaagataaaatatacctacgtgatttaacggtcctccatttaat-aaaagatcaaagggtttaaattaaaataattaat 43460758  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattga 208  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||| |||    
T  43460759 aggatctatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactgtgaggatttatttggcaaatggaggaaaaagtga 43460858  T
Q  209 gggaccaaaagatacgtgttattaat 234  Q
    ||||| ||||  ||||| ||||||||    
T  43460859 gggactaaaatgtacgttttattaat 43460884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 32255204 - 32255044
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaacc 173  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||||||||    
T  32255204 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaacc 32255105  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||  ||||||||||||||||||||||||||| ||||||| |||||  ||||| ||||||||    
T  32255104 gtcgggatttatttggcaaacggaggaaaaagtgagggatcaaaatgtacgttttattaat 32255044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 11502301 - 11502462
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||| |||||||  ||| |||||| || | ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||    
T  11502301 atccaatggttctctttttaaaagaaa-atcaaacggctgaaattaaaataattactaggatctatggtggaccactcttaaggttggtctaccatagac 11502399  T
Q  152 atcatttga-gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggac 213  Q
    ||||||||| |||||||||||| ||  ||||||||||||||||| ||| |||| |||||||||    
T  11502400 atcatttgaggttaaacttaactgttgggatttatttggcaaacagagcaaaagttgagggac 11502462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 75 - 212
Target Start/End: Complemental strand, 40811534 - 40811397
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    ||||||||||| |||| |||||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  40811534 aaaagatcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaaccg 40811435  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgaggga 212  Q
    | ||||||||||| | | |||||||||||  |||||||    
T  40811434 tcaggatttatttagtatacggaggaaaatatgaggga 40811397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 218
Target Start/End: Original strand, 13564119 - 13564284
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||| ||||||| || | ||| || |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  13564119 atccaatggttctctttttaaaaaata-atctaacggttcaaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccatagac 13564217  T
Q  152 atcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    || |||| | ||||||||||| |||  ||||||||||||||||||||||||||  |||||||| ||||    
T  13564218 attatttggggttaaacttaa-cgtcgggatttatttggcaaacggaggaaaatgtgagggactaaaa 13564284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 22537832 - 22537654
Alignment:
Q  13 gtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaatagga 112  Q
    |||||| ||||||| || | |||| |||| |||| | | |||||| ||||| ||||||||| ||||  ||||| |||| |||||||||||||||||||||    
T  22537832 gtgttggtggttcatcgtaagataaaatagacctgcataatccaatggttc-ccttttaaaaaaaa--tcaaacggtttaaattaaaataattaatagga 22537736  T
Q  113 tctatggtggaccactcttaaggttggtccaccgtagacatcatttga-gttaaacttaaccgtgaggatttatttggcaaac 194  Q
    ||||||||||| |||| ||||||||||| ||||||| ||||||||||| |||||| ||||| ||  |||||||||||||||||    
T  22537735 tctatggtggatcactattaaggttggttcaccgtaaacatcatttgaggttaaaattaacagt-tggatttatttggcaaac 22537654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 22336181 - 22336050
Alignment:
Q  87 ggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtgaggatttat 185  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| | ||||||||||||  |  ||||||||    
T  22336181 ggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatag-catcatttggggttaaacttaacattcgggatttat 22336083  T
Q  186 ttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||| ||||||||  |||||||| ||||    
T  22336082 ttggcaaactgaggaaaaggtgagggactaaaa 22336050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 145
Target Start/End: Complemental strand, 35295935 - 35295842
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    ||||||| || ||| |||||||  | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35295935 atccaacagtcctcattttaaaatatagatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 35295842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 47454558 - 47454392
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaa 165  Q
    |||| ||| |||| |||||| |||||||||||| | |||||||| | |||| | |||||||||||||||||||||| ||| |||||||  || |||||||    
T  47454558 ctttaaaaaaaaaaatcaaacggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccatagacat--ttagagttaa 47454461  T
Q  166 acttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    | ||||  ||  |||||||||||||||||| || |||| ||||||||||||||  ||||| ||||||||    
T  47454460 agttaatagtcgggatttatttggcaaacgaagaaaaacttgagggaccaaaatgtacgttttattaat 47454392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 47059367 - 47059179
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaa-agatcaaatggttaaaattaaaataa--ttaataggatctatggtggaccactc 129  Q
    |||| ||||||| | ||| |||||| |||  |||||||||| ||| |||||||| |||| ||||||||| ||  |||||| | |||||||||| | ||||    
T  47059367 gataaaatacacatgcgtaatccaatggtcatccttttaaataaacagatcaaacggtttaaattaaaaaaaaattaataaggtctatggtgggctactc 47059268  T
Q  130 ttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||| |||||| ||||| |     | |||||||||||| || |||||||||||||||||||||||||||| ||||||| |||||    
T  47059267 ttaaggttgctccaccatagacttttggagggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaa 47059179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 16756124 - 16756006
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactctta 132  Q
    |||| ||||||| | ||| ||| || ||| ||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||| ||| ||| |||    
T  16756124 gataaaatacacttgcgtaatctaatggtcctccttttaaaaaaaa--tcaaatggttaaaattaaaataattaataggatctatggtagacaactttta 16756027  T
Q  133 aggttggtccaccgtagacat 153  Q
    |||||| | |||| |||||||    
T  16756026 aggttgtttcaccatagacat 16756006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 44372942 - 44372864
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||    
T  44372942 aaaagatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaatgttagtccactatagacat 44372864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 44381798 - 44381720
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||    
T  44381798 aaaagatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaatgttagtccactatagacat 44381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 46201325 - 46201266
Alignment:
Q  94 attaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  46201325 attaaaataattaatatgatctatggtggaccactcttaaggttggttcaccatagacat 46201266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 234
Target Start/End: Original strand, 47060368 - 47060536
Alignment:
Q  64 tccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagtt 163  Q
    |||||||||| || | |||||| | ||||| || ||| | |||||| | |||||||||||| | |||||||||||||||||| || ||||  || | |||    
T  47060368 tccttttaaaaaacaaatcaaacgattaaattttaaaaatttaataaggtctatggtggactattcttaaggttggtccaccatatacat--ttggtgtt 47060465  T
Q  164 aaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||| ||  ||||||||||||||||||||  |||   |||||||||||||  ||||| ||||||||    
T  47060466 aaacttaacagtccggatttatttggcaaacggaaaaaagggtgagggaccaaaacgtacgttttattaat 47060536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 669292 - 669369
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| |||| ||||||| | |||||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  669292 aaaagatcaaacggtttaaattaacaaaattaataggatctatggtggaccactcttaa-gatggtccaccatagacat 669369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 41328443 - 41328354
Alignment:
Q  63 ctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| |||| |||||| |||| |||||| |||||||||||||||||||||||||||| | |||| |||| |||||| |||||||    
T  41328443 ctccttttaaa-aaaatatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagttgttccaccatagacat 41328354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 11501389 - 11501251
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | ||||   || |||||| |||||||||||||||| |||||||  ||  ||||||| ||||| ||      
T  11501389 agatcgaatggttaaaattaacaaaattaataaggtctacaatgaaccacttttaaggttggtccaccatagacat--ttgaagttaaagttaacagtcg 11501292  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||| |||||||||  |||||||| ||||    
T  11501291 ggatttatttggcaaatggaggaaaaggtgagggactaaaa 11501251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 43441566 - 43441481
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||| |||| ||||||  ||| | |||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  43441566 tttaaaaaaaatatcaaacagtttacattaaaataattaataggacttatggtggaccactcttaaggttggtacaccatagacat 43441481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 22337288 - 22337401
Alignment:
Q  88 gttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttattt 187  Q
    ||||||||||| | |||||||| | |||| |||| || ||  |||||||||||||||| |||||||  ||  ||||||| ||||| || |||||||||||    
T  22337288 gttaaaattaacaaaattaataaggtctacggtgtactacatttaaggttggtccaccatagacat--ttgaagttaaatttaacggtcaggatttattt 22337385  T
Q  188 ggcaaacggaggaaaa 203  Q
    ||||||||||||||||    
T  22337386 ggcaaacggaggaaaa 22337401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 40508586 - 40508433
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaac-cgtgag 178  Q
    |||||| |||||||||| ||| |||||||   ||||||||||||| ||||||||| ||| |||||| |||||||  || |  ||||||||||| |   ||    
T  40508586 atcaaacggttaaaatttaaaaaattaatgaaatctatggtggacaactcttaagattgatccaccatagacat--ttgggattaaacttaacaccgaag 40508489  T
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||| ||||||||||||| ||||||||  |||  ||||| ||||||||    
T  40508488 gatttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaat 40508433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 41078930 - 41078842
Alignment:
Q  115 tatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaa 203  Q
    |||||||||||| | ||||| |||||||||| || |||||||||| |||||| ||||||||  ||||||||| |||||| |||||||||    
T  41078930 tatggtggaccatttttaagattggtccaccatatacatcatttgggttaaagttaaccgtcgggatttattcggcaaatggaggaaaa 41078842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 43459664 - 43459531
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | |||| | || |||| | ||||||||| |||||| |||||||  || |||||||||||||| |       
T  43459664 agatcgaatggttaaaattaacaaaattaataaggtctacgatgtaccatttttaaggttgatccaccatagacat--ttggagttaaacttaacagccg 43459567  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggac 213  Q
     |||||||||||||||||||||||||  ||||||||    
T  43459566 agatttatttggcaaacggaggaaaacatgagggac 43459531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 32256344 - 32256456
Alignment:
Q  120 tggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaag 219  Q
    ||||||||| |||| ||||||||||| |||||||  ||  ||||||| ||||| ||  | |||||||||||||| |||||||||| ||||||||||||||    
T  32256344 tggaccacttttaatgttggtccaccatagacat--ttgaagttaaagttaacggttggaatttatttggcaaatggaggaaaaagtgagggaccaaaag 32256441  T
Q  220 atacgtgttattaat 234  Q
     ||| | ||||||||    
T  32256442 gtacattttattaat 32256456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 2414952 - 2414890
Alignment:
Q  81 tcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtcca 143  Q
    ||||| |||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||    
T  2414952 tcaaacggtttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtcca 2414890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 3413742 - 3413603
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    |||||||| |||||||||| ||| |||||||    |||||||||||| ||||||||| ||| |||||| ||||||||  |  ||||||||||||| || |    
T  3413742 agatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatccaccatagacatc--tgaagttaaacttaacagtta 3413645  T
Q  178 -ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
     ||||||||||||||||| ||| ||||  |||||||| ||||    
T  3413644 gggatttatttggcaaacagagtaaaaggtgagggactaaaa 3413603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 30334539 - 30334698
Alignment:
Q  69 ttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaact 168  Q
    ||||| |||| ||| || |||| ||||||||| |||||||||||||||||||||||   |||||| |||||||| || |||||||  || |||||| | |    
T  30334539 ttaaaaaaaaaatctaacggtttaaattaaaa-aattaataggatctatggtggactgttcttaaagttggtcctccatagacat--ttagagttagatt 30334635  T
Q  169 taaccgtgagg-atttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||| ||  || |||||||||||||||||||| |    |||||||||||||| ||||| ||||||||    
T  30334636 taacggtttggaatttatttggcaaacggaggga----tgagggaccaaaaggtacgttttattaat 30334698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 39981530 - 39981452
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| |||||| |||| |||||| |||||||||| ||||||||||||||||| | |||| ||||||||||| |||||||    
T  39981530 aaaaaatcaaacggtttaaattagaataattaattggatctatggtggaccatttttaaagttggtccaccatagacat 39981452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 33096981 - 33096924
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||||||||||||||| |||||||||||||| || || ||||||||    
T  33096981 aggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtaagttttattaat 33096924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 210
Target Start/End: Original strand, 40509637 - 40509771
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaac-c 173  Q
    |||||||||||  || |||||| ||| |||||||    ||||||||||||||||||||||||||||||||  |||||||  || | |||||||||||| |    
T  40509637 aaaagatcaaacagtcaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacac 40509734  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagg 210  Q
       | ||||||||||| |||||||||||||| |||||    
T  40509735 cgaatgatttatttggtaaacggaggaaaaagtgagg 40509771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 232
Target Start/End: Original strand, 41079748 - 41079894
Alignment:
Q  84 aatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggattt 183  Q
    |||||||||||| || | |||||||| | |||| | ||||||||| |||| |||| |||||| |||| ||  || |||||||| ||||| ||  ||||||    
T  41079748 aatggttaaaatcaacaaaattaataaggtctacgatggaccacttttaatgttgttccaccatagatat--ttggagttaaagttaacggtagggattt 41079845  T
Q  184 atttggcaaacggaggaaaaattgagggaccaaaagatacgtgttatta 232  Q
    |||| |||||||||||||||  | |||||||||||  ||||| ||||||    
T  41079846 atttagcaaacggaggaaaagataagggaccaaaacgtacgttttatta 41079894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 6173455 - 6173511
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||    
T  6173455 ggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaat 6173511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 210
Target Start/End: Original strand, 22115067 - 22115201
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaac-c 173  Q
    |||||||||||  || |||||| ||| |||||||    ||||||||||||||||||||||||||||||||  |||||||  || | |||||||||||| |    
T  22115067 aaaagatcaaacagtcaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccactatagacat--ttggggttaaacttaacac 22115164  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagg 210  Q
       | |||||||||||  ||||||||||||| |||||    
T  22115165 cgaangatttatttggtnaacggaggaaaaagtgagg 22115201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 30333395 - 30333340
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaat 30333340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 46835872 - 46835730
Alignment:
Q  92 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtgaggatttatttggc 190  Q
    |||||||||||||||||||||| |||||| |||||   |||||  || |||||| || ||||||||| | ||||||||||||   || |||||||||| |    
T  46835872 aaattaaaataattaataggatatatggtagaccaactttaagaatgatccaccataaacatcatttggggttaaacttaacttcga-gatttatttgac 46835774  T
Q  191 aaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||| |||||||||||||| |||  ||| |||| | ||||||||    
T  46835773 aaacagaggaaaaattgagagacttaaaaatacattttattaat 46835730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 15992328 - 15992270
Alignment:
Q  95 ttaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||||||||||||| ||||  | ||||||||||||||||||||| |||||||    
T  15992328 ttaaaataattaataggatctttggtaaatcactcttaaggttggtccaccatagacat 15992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 4299951 - 4300109
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaac-c 173  Q
    ||||||||||| ||| |||||| ||| |||||||    |||||||||| ||||||||||||||| |||||  ||||| |  || | |||||||||||| |    
T  4299951 aaaagatcaaacggtcaaaatttaaaaaattaatgaagtctatggtgggccactcttaaggttgatccactatagacgt--ttggggttaaacttaacac 4300048  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
       | |||||||||||||||| ||||||||| ||||||||  |||  ||||| ||||||||    
T  4300049 cgaaagatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaat 4300109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 24844389 - 24844332
Alignment:
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||| |||||||||||||||||||||||| |||||  |||||||| ||||    
T  24844389 gttaaacttaacagtgaggatttatttggcaaacggaagaaaatgtgagggactaaaa 24844332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 218
Target Start/End: Original strand, 9662116 - 9662281
Alignment:
Q  50 tgatccaacggttctc-cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct-taaggttggtccaccgt 147  Q
    |||||||||||| ||| || ||||| |||||||||||||||||||||| ||| |||||||| | |||||||||||| | ||| ||| ||||||||||| |    
T  9662116 tgatccaacggtcctctctcttaaa-aaaagatcaaatggttaaaattgaaa-aattaataaggtctatggtggacta-tctataatgttggtccaccat 9662212  T
Q  148 agacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||  ||  ||||||| ||||| ||  ||||||||||| |  ||||||  |||  |||||||||||||    
T  9662213 agacat--ttgaagttaaatttaacagtctggatttatttgaccgacggagacaaacgtgagggaccaaaa 9662281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 10957067 - 10957110
Alignment:
Q  84 aatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  10957067 aatggttaaaattaaaagaattaataagatctatggtggaccac 10957110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 45454150 - 45454088
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaatgatga 239  Q
    |||||||||||||||||||||||||||| |||||||| ||||  || || |||||||| ||||    
T  45454150 aggatttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatga 45454088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 4167670 - 4167609
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| |||||| |||| ||||| ||| | |||||| |||||||||||||||||    
T  4167670 cttttaaagaaaaaatcaaaaggttgaaatttaaaaatttaataagatctatggtggaccac 4167609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 26406359 - 26406283
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    |||||||||||||||| |||| || |||| |||||| |||||||||||||  |||| |||  ||||||||||||||||    
T  26406359 tgatccaacggttctcttttttaa-aaaatatcaaagggttaaaattaaatgaatttataatatctatggtggaccac 26406283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 45455360 - 45455433
Alignment:
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||| |  | |||||||||||||||||||| ||||| ||||||| |||||  ||||| ||||||||    
T  45455360 gttaaacttaacagccatgatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaat 45455433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 22538834 - 22538893
Alignment:
Q  159 gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||| ||||||||   |||||||||||||||||||||||||  |||||||| ||||    
T  22538834 gagttaaagttaaccgtcgagatttatttggcaaacggaggaaaagatgagggactaaaa 22538893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 32603043 - 32602988
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||||||| ||||| |||||||| ||||  ||||| ||||||||    
T  32603043 gatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaat 32602988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 47456381 - 47456436
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||| || |||||| |||||||||||||  ||||| ||||||||    
T  47456381 gatttatttggcaaacagaagaaaaaatgagggaccaaaaagtacgttttattaat 47456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 24494957 - 24495015
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaa 133  Q
    |||| ||||||||||||||||||||| |||||||| |   |||||||||||||| ||||    
T  24494957 aaaaaatcaaatggttaaaattaaaaaaattaataaggcatatggtggaccacttttaa 24495015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 25154815 - 25154920
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaa--gatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgt 147  Q
    ||||||||||||  || ||||||| ||||  ||||||| |||||||| ||||| | |||||| | | ||||||||||||||  ||| |||||| |||| |    
T  25154815 tgatccaacggtcttcattttaaaaaaaaacgatcaaacggttaaaaataaaagatttaataagttttatggtggaccacttataaagttggttcacctt 25154914  T
Q  148 agacat 153  Q
    ||||||    
T  25154915 agacat 25154920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 48312295 - 48312202
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaa-gatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    |||| |||| |||| ||| |||||| |||  |||||||||| |||| |||||||   || ||||||||| |||||||||||||||||||||||||    
T  48312295 gataaaatagacctgcgtaatccaatggtcatccttttaaaaaaaaagatcaaaccatttaaattaaaa-aattaataggatctatggtggacca 48312202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 131898 - 131939
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaata 109  Q
    |||||||||||||||||| |||||||||||||| | ||||||    
T  131898 tttaaagaaaagatcaaacggttaaaattaaaaaatttaata 131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 30310232 - 30310200
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagg 210  Q
    ||||||||||||||||||||||||||| |||||    
T  30310232 ggatttatttggcaaacggaggaaaaaatgagg 30310200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 33779036 - 33779068
Alignment:
Q  121 ggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||||||||||||||||| |||||||    
T  33779036 ggaccactcttaaggttggtccaccatagacat 33779068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 35484191 - 35484294
Alignment:
Q  50 tgatccaacggttctccttt-taaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgta 148  Q
    ||||| ||| |||||| ||| |||| ||||||||||| |||||||||||||| |  || || |||||||||||||||||   ||| |||||| |||| ||    
T  35484191 tgatctaactgttctcatttataaacaaaagatcaaagggttaaaattaaaa-atctattaagatctatggtggaccacctataatgttggttcacctta 35484289  T
Q  149 gacat 153  Q
    |||||    
T  35484290 gacat 35484294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 7311561 - 7311785
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||||||||||||||||| | |||| |||||| ||| ||||||||||||| || |||| ||  |||| |||||| |||| |||||||||||||||||    
T  7311561 ttaagtgttgatggttcaacgtaagataaaatacatctatgtgatccaacggtcctgctttaaacaaaaaaatcaaacggtttaaattaaaataattaat 7311660  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattga 208  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||||||||  ||||||||||| ||||||||||||||||||||  ||  ||||| | |    
T  7311661 aggatttatggtggaccactcttaaggttggttcaccatagacatcatttggattaaacttaactgtgaggatttatttggcaaatagataaaaaagtaa 7311760  T
Q  209 gggaccaaaagatacgtgttattaat 234  Q
    ||||||||||| ||||| ||||||||    
T  7311761 gggaccaaaaggtacgt-ttattaat 7311785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 5187515 - 5187646
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaa 165  Q
    ||||||||  ||| ||||||  ||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||  |||||| |||||| |||||    
T  5187515 cttttaaaataaaaatcaaacagttgaaattaatataattaataggatctatggtgaaccacttttaaggttggtccactatagacaacatttgggttaa 5187614  T
Q  166 acttaaccgtgaggatttatttggcaaacgga 197  Q
    |||||||||| |||||||||||||||||||||    
T  5187615 acttaaccgtcaggatttatttggcaaacgga 5187646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 218
Target Start/End: Complemental strand, 17837852 - 17837687
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| |||| || |||| ||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  17837852 atccaatggttatcgtttttaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccatagac 17837754  T
Q  152 atcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||| | |||||||||||| ||  |||||||||||| ||||||| |||||  |||||||| ||||    
T  17837753 atcatttggggttaaacttaactgt-tggatttatttggtaaacggaagaaaagatgagggactaaaa 17837687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 23392428 - 23392290
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaacc 173  Q
    |||| |||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| | ||||||||||||     
T  23392428 aaaatatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccttag-catcatttggggttaaacttaaca 23392330  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggac 213  Q
     | |||||||||||||||||||||||||||  ||||||||    
T  23392329 tttaggatttatttggcaaacggaggaaaaggtgagggac 23392290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 203
Target Start/End: Original strand, 29381632 - 29381760
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaacc 173  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||| | ||||||||||||     
T  29381632 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaact 29381731  T
Q  174 gtgaggatttatttggcaaacggaggaaaa 203  Q
    ||  |||||||||||| |||||||||||||    
T  29381732 gt-tggatttatttggtaaacggaggaaaa 29381760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 18346644 - 18346771
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttga-gtta 164  Q
    |||||||| |||| |||||| |||| |||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  18346644 cttttaaaaaaaa-atcaaacggtttaaattaaaataattaataggatttatagtggaccactcttaaggttggttcaccgtaaacatcatttgaggtta 18346742  T
Q  165 aacttaaccgtgaggatttatttggcaaac 194  Q
    || ||||| ||  |||||||||||||||||    
T  18346743 aaattaacagt-cggatttatttggcaaac 18346771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 218
Target Start/End: Complemental strand, 12669936 - 12669794
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttga-gttaaacttaacc 173  Q
    |||||||||||| ||| | ||||| | || ||||| ||||||||||||||||||||||||||||||||||| || |   ||||||| |||||| |||||     
T  12669936 aaaagatcaaatagtttatattaataaaaataatatgatctatggtggaccactcttaaggttggtccaccataca---catttgaggttaaagttaaca 12669840  T
Q  174 gtgag-gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    || || ||||||||| |||||||||||||||| ||| |||| ||||    
T  12669839 gttagagatttatttagcaaacggaggaaaaagtgacggactaaaa 12669794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 11723011 - 11722921
Alignment:
Q  63 ctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| |||| |||||| |||| |||||| |||||||||||||||||||||||||||| | |||| || |||||||| |||||||    
T  11723011 ctccttttaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat 11722921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 218
Target Start/End: Original strand, 23397268 - 23397399
Alignment:
Q  85 atggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggattta 184  Q
    |||||||||||||| | |||||||| | | || ||||||| ||| |||||||||||||||| |||||||  ||  ||||||| ||||| ||  |||||||    
T  23397268 atggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccatagacat--ttgaagttaaatttaacggtcgggattta 23397365  T
Q  185 tttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||  |||||||| ||||    
T  23397366 tttggcaaacggaggaaaaggtgagggactaaaa 23397399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 29380400 - 29380262
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | |||| | ||||| ||| ||||||||| |||||| || ||||  ||  ||||||| ||||| ||      
T  29380400 agatcgaatggttaaaattaacaaaattaataaggtctacgatggactacttttaaggttgatccaccatatacat--ttgaagttaaaattaacggtcg 29380303  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||| |||||  |||||||| ||||    
T  29380302 ggatttatttggcaaacggaagaaaaggtgagggactaaaa 29380262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 6702857 - 6702910
Alignment:
Q  159 gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgaggga 212  Q
    |||||||||||||| || |||||||||||||||||||||||||||  |||||||    
T  6702857 gagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgaggga 6702910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 11967412 - 11967351
Alignment:
Q  92 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||||||||||||||| |||||||| |||||| |||| |||||||||||||  |||||||    
T  11967412 aaattaaaataattaatatgatctatgatggacccctctcaaggttggtccacaatagacat 11967351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 32506969 - 32507071
Alignment:
Q  115 tatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgt-gaggatttatttggcaaacggaggaaaaattgagggac 213  Q
    |||||| |||||||||||||||||||||||| |||| ||  || | |||||||||||| ||  |||||||||||||||||| ||| ||||  ||||||||    
T  32506969 tatggtagaccactcttaaggttggtccaccatagatat--ttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgagggac 32507066  T
Q  214 caaaa 218  Q
     ||||    
T  32507067 taaaa 32507071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 6452453 - 6452572
Alignment:
Q  115 tatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaactt-aaccgtga-ggatttatttggcaaacggaggaaaaattgaggga 212  Q
    ||||||||||||||||||| |||| | |||  |||| ||  |||| ||||||||| ||| || | ||||||||||||||||||||||||||| |||||||    
T  6452453 tatggtggaccactcttaaagttgatacactatagatat--tttgggttaaactttaacggtcaaggatttatttggcaaacggaggaaaaaatgaggga 6452550  T
Q  213 ccaaaagatacgtgttattaat 234  Q
    |  |||  ||||| ||||||||    
T  6452551 ctcaaacgtacgttttattaat 6452572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 6452396 - 6452355
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  6452396 aggatttatttggcaaacggaggaaaaagtgagggactaaaa 6452355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 17839046 - 17839184
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | |||||||| | ||||   ||||| ||| ||||||||  |||||| |  ||||  ||  ||||||| ||||| ||      
T  17839046 agatcgaatggttaaaattaacaaaattaataaggtctacaatggactacttttaaggttaatccaccatctacat--ttgaagttaaaattaacggtcg 17839143  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||||||||||||  |||||||| ||||    
T  17839144 ggatttatttggcaaacggaggaaaaggtgagggactaaaa 17839184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 232285 - 232245
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  232285 ggatttatttggcaaacggaggaaaaagtgagggactaaaa 232245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 7312187 - 7312238
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    |||||||||||||||| ||||||||| |||||||| |||||| |||| |||||    
T  7312187 aaaagatcaaatggttgaaattaaaa-aattaataagatctacggtgaaccac 7312238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 24757095 - 24757043
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    |||||||||||| ||||||||||||| |||||||| | |||| ||| ||||||    
T  24757095 aaaagatcaaattgttaaaattaaaagaattaataaggtctaaggtagaccac 24757043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 43462 - 43636
Alignment:
Q  59 ggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatca-tt 157  Q
    ||||||| ||||||| ||||  ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||    
T  43462 ggttctctttttaaaaaaaa--tcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcactt 43559  T
Q  158 tgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
     | ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||  ||| |||||| ||||||||    
T  43560 ggggttaaacttaaccgtcaggacttatttggcaaacggaggaaaaagtgagggacttaaacatacgttttattaat 43636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 9e-48; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 22047947 - 22047787
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaacc 173  Q
    |||| |||||| |||| |||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||     
T  22047947 aaaaaatcaaacggtttaaattaaaataattcataggatttatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaaca 22047848  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |  |||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||    
T  22047847 gccaggatttatttggcaaacggaggaaaaaatgagggaccaaaacgtacgttttattaat 22047787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 39604068 - 39603908
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaacc 173  Q
    |||| ||||||  ||| |||||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||||||||| | ||||||||||||     
T  39604068 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaaca 39603969  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    || | ||||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||    
T  39603968 gtcatgatttatttggcaaacggaggaaaatttgagggaccaaaacgtacgttttattaat 39603908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 30859050 - 30859233
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||| ||||||| | || |||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  30859050 atccaatggttctctttttaaaaagaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagac 30859149  T
Q  152 atcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||| | |||||||||||| || | || ||||||||||||| ||||||||  ||||||||  |||  ||||| ||||||||    
T  30859150 atcatttggggttaaacttaacggtcaagacttatttggcaaacagaggaaaatgtgagggacttaaacgtacgttttattaat 30859233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 325089 - 325246
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    ||||||||||| |||||||||||| | |||||||| | |||| | ||||||||| |||||||||||||||| |||||||  || |||||||| ||||| |    
T  325089 aaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactattaaggttggtccaccatagacat--ttagagttaaagttaacag 325186  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |  |||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  325187 tcgggatttatttggcaaacggaggaaaacttgagggaccaaaaggtacgttttattaat 325246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 27705218 - 27705377
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    |||| |||||| |||| |||||||||  |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||| ||||| |    
T  27705218 aaaatatcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttggattaaagttaactg 27705317  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |  | |||||||||||||| |||||||||  |||||||||||||  ||||| ||||||||    
T  27705318 tctgtatttatttggcaaaaggaggaaaatctgagggaccaaaacgtacgttttattaat 27705377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 30910965 - 30910812
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagtta 164  Q
    |||||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||||    
T  30910965 cttttaaagaaaaactcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccaaagacatcatttggtgtta 30910866  T
Q  165 aacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    || ||||| ||   ||||||||||| |||| ||||||||  |||||||| ||||    
T  30910865 aagttaacagtcgagatttatttggtaaacagaggaaaatgtgagggactaaaa 30910812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 11262614 - 11262536
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11262614 ttttaaaaaaaagatcaaatggtttaaattataataattaataggatctatggtggaccactcttaaggttggtccacc 11262536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 15548456 - 15548321
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaat----aggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaactt 169  Q
    |||| ||||||||||| |||||||||||||||||    ||||| ||||||||| || ||||||||||||||||||  ||||||||||| | |||||||||    
T  15548456 aaaaaatcaaatggtttaaattaaaataattaattaataggatttatggtggatcattcttaaggttggtccaccagagacatcatttagggttaaactt 15548357  T
Q  170 aaccgtgaggatttatttggcaaacggaggaaaaat 205  Q
    ||| |  |||||||||||||||||||||||||||||    
T  15548356 aacaggcaggatttatttggcaaacggaggaaaaat 15548321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 1102838 - 1102753
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  1102838 tttaaaaaaaagatcaaacggtttaaattaaaataattaataagatctatggtggaccactcttaaggttggtctaccatagacat 1102753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 1010272 - 1010409
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    |||||||| |||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| || ||||  || | |||||| ||||||||      
T  1010272 agatcaaagggttgaaattaaa-taattaataggatctatggcggaccactcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcg 1010368  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||| |  ||||||  |||  |||||||||||||    
T  1010369 ggatttatttgactgacggagacaaacgtgagggaccaaaa 1010409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 8521463 - 8521326
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    |||||||| |||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||| || ||||  || | |||||| ||||||||      
T  8521463 agatcaaagggttgaaattaaa-taattaataggatctatggtggaccattcttaaggttggtccaccatacacat--ttggggttaaagttaaccgtcg 8521367  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||| |  ||||||  |||  |||||||||||||    
T  8521366 ggatttatttgactgacggagacaaacgtgagggaccaaaa 8521326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 33173862 - 33174005
Alignment:
Q  75 aaaagatcaaatggttaaaatt-aaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaacc 173  Q
    ||||||||||| |||||||||| |||| |||||||    |||||||| |||||||||||||||||||||||| |||||||  || | ||||||||||||     
T  33173862 aaaagatcaaacggttaaaatttaaaaaaattaatgaagtctatggtagaccactcttaaggttggtccaccatagacat--ttggggttaaacttaaca 33173959  T
Q  174 g-tgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |   |||||||||||||||||| ||||||||  |||||||| ||||    
T  33173960 gccaaggatttatttggcaaacagaggaaaaggtgagggactaaaa 33174005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 218
Target Start/End: Original strand, 22308694 - 22308844
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaa 166  Q
    ||||||| || ||||||||||||| | ||||||| | ||||||   |||||||||||||||||||||||| |||||||| |||||||  || | ||||||    
T  22308694 ttttaaaaaacagatcaaatggtttacattaaaaaatttaataatgtctatggtggaccactcttaaggtaggtccaccatagacat--ttggggttaaa 22308791  T
Q  167 cttaaccgtga-ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||    | ||||||||||||||||||||| ||||  |||||||| ||||    
T  22308792 cttaacaaccatggatttatttggcaaacggagcaaaatgtgagggactaaaa 22308844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 1009375 - 1009328
Alignment:
Q  98 aaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009375 aaataattaataggatctatggtggaccactcttaaggttggtccacc 1009328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 13520660 - 13520760
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactctta 132  Q
    |||| |||| |||| ||| |||||||||||||| ||||| | |||| ||| ||  ||| |||| ||| ||||||||||||||||||||| ||||||||||    
T  13520660 gataaaatagaccttcgtaatccaacggttctctttttataaaaaaaatccaacagtttaaatcaaattaattaataggatctatggtgaaccactctta 13520759  T
Q  133 a 133  Q
    |    
T  13520760 a 13520760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 4127161 - 4127215
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaag 134  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||    
T  4127161 atcaaatggtttaaattaaattaattaacaggatctatggtggaccacttttaag 4127215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 30912084 - 30912207
Alignment:
Q  93 aattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaa 192  Q
    |||||| | |||||||| | |||||| || |||||| |||||||||||||||| |||| ||  || |||||||| |||||  |  |||||||||||||||    
T  30912084 aattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatat--ttggagttaaagttaacacttgggatttatttggcaa 30912181  T
Q  193 acggaggaaaaattgagggaccaaaa 218  Q
    |||||| ||||  |||||||| ||||    
T  30912182 acggagaaaaaggtgagggactaaaa 30912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 39605464 - 39605514
Alignment:
Q  168 ttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  39605464 ttaaccgtcaggatttatttggcaaacggaggaaaatctgagggaccaaaa 39605514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 10977295 - 10977183
Alignment:
Q  14 tgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggat 113  Q
    ||||||||||||| || |||||| |||| || ||  ||||||||||||||   |||| || || ||||||||||| ||||||||||| |||||||| | |    
T  10977295 tgttgatggttcatcgtatgatacaatagacatatatgatccaacggttcctgttttcaaaaatagatcaaatggataaaattaaaa-aattaatatggt 10977197  T
Q  114 ctatggtggaccac 127  Q
    ||||||| ||||||    
T  10977196 ctatggtagaccac 10977183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 30857965 - 30857855
Alignment:
Q  122 gaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagat 221  Q
    ||||||| |||||||||||||| | |||||||  ||  ||||||| ||||| || | |||||||||| |||| |||||||||  ||| ||||||||| ||    
T  30857965 gaccacttttaaggttggtccatcatagacat--ttaaagttaaagttaactgttaagatttatttgacaaaaggaggaaaatctgaaggaccaaaacat 30857868  T
Q  222 acgtgttattaat 234  Q
    |||| ||||||||    
T  30857867 acgttttattaat 30857855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 9220352 - 9220441
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac---tcttaaggttggtccaccgtagacat 153  Q
    ||||||| ||||| |||||| |||| |||||||||||||||||| ||| ||||| |||||||   |||||| ||||||||||| |||||||    
T  9220352 cttttaaggaaaa-atcaaacggtttaaattaaaataattaataagatttatgggggaccactcttcttaatgttggtccaccatagacat 9220441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 10735964 - 10735901
Alignment:
Q  87 ggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtaga 150  Q
    |||| |||||||||||||||||| ||||||||||||||  || |||| ||||||||||| ||||    
T  10735964 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccataga 10735901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 28702772 - 28702729
Alignment:
Q  84 aatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  28702772 aatggttaaaattaaaagaattaataagatctatggtggaccac 28702729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 36898884 - 36898954
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    |||| |||||| |||| ||| |||||||||||| || ||||||||||||| ||| |||||||||| |||||    
T  36898884 aaaaaatcaaagggtttaaactaaaataattaacagaatctatggtggactacttttaaggttgggccacc 36898954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 21387856 - 21387795
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||| |||||    
T  21387856 cttttaaagaaaaaatcaaatggttaaaattaaaaaatttaatacggcctatggtgaaccac 21387795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 22049124 - 22049197
Alignment:
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||| |   ||||||||||| ||||| ||||||||| |||||||||||||  ||||| ||||||||    
T  22049124 gttaaacttaacagcagggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaat 22049197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 40058253 - 40058150
Alignment:
Q  50 tgatccaacggttctcc-ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgta 148  Q
    |||||||||||| |||| ||||||| |||||||||||  ||||||| ||||| | |||||| | |||||||||||| |||  ||| |||||| |||| ||    
T  40058253 tgatccaacggt-ctccattttaaaaaaaagatcaaacagttaaaaataaaagatttaataaggtctatggtggactacttataaagttggttcacctta 40058155  T
Q  149 gacat 153  Q
    |||||    
T  40058154 gacat 40058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 324252 - 324174
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| |||||| |||||| |||||   |||||||| | |||||| ||||||||| |||| ||||||||||| |||||||    
T  324252 aaaaaatcaaacggttaagattaacgcaattaataaggtctatgatggaccactattaaagttggtccaccatagacat 324174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 15856743 - 15856665
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| |||||||| |||||||||||| | ||| || | |||||||||||||||   ||| ||||||||||| |||||||    
T  15856743 aaaatatcaaatgattaaaattaaaaaacttagtaaggtctatggtggaccacctataatgttggtccaccttagacat 15856665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 35081344 - 35081418
Alignment:
Q  79 gatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| ||||| ||||||||||| ||||| || | | |||||||||| ||||||||||||| |||||  |||||||    
T  35081344 gatcgaatggctaaaattaaaaaaattattaaggtttatggtggacaactcttaaggttgatccactatagacat 35081418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 7426860 - 7426799
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| |||||| |||| ||||| ||| | |||||| | |||||||||||||||    
T  7426860 cttttaaagaaaaaatcaaaaggttgaaatttaaaaatttaataaggtctatggtggaccac 7426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 15941385 - 15941328
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||| ||||||| |||||||| |||||| |||||||||||| | ||||| ||||||||    
T  15941385 aggacttatttgacaaacggaagaaaaagtgagggaccaaatggtacgttttattaat 15941328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 18693916 - 18693856
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| |||||||| |||||||||||| | |||||| | ||||||||| |||||    
T  18693916 cttttaaagaaaa-atcaaatgattaaaattaaaaaatttaatacggtctatggtgaaccac 18693856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 9e-45; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 7707864 - 7707674
Alignment:
Q  13 gtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaatagga 112  Q
    ||||||||||| || || | |||| |||| |||| | | |||||| ||||||| |||||||||||| |||||| |||| |||||||||||||||||||||    
T  7707864 gtgttgatggtacatcgtaagataaaatagacctgcctaatccaatggttctc-ttttaaagaaaaaatcaaacggttgaaattaaaataattaatagga 7707766  T
Q  113 tctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaa 203  Q
    ||||||||||||||||||||||||||||| |||  ||||||||||| | ||||||  ||||||| |||||||||||||||||| ||||||||    
T  7707765 tctatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtcaggatttatttggcaaacagaggaaaa 7707674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 2312362 - 2312543
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||| ||||||| ||||  |||||  ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  2312362 atccaatggttctctttttaaaaaaaa--tcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagac 2312459  T
Q  152 atcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||| | |||||||||||| || | |||||||||||||||||||||||||| ||||||||  |||  ||||| ||||||||    
T  2312460 atcatttggggttaaacttaacggtcatgatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaat 2312543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 27850827 - 27850993
Alignment:
Q  63 ctccttttaaagaaaaga-tcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttga- 160  Q
    ||||||| ||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||     
T  27850827 ctcctttaaaaaaaaagaatcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttgag 27850926  T
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||| ||  ||||||||       |||||||||||||||||||||||||| |||||| ||||||||    
T  27850927 gttaaacttaactgttgggatttat-------acggaggaaaaattgagggaccaaaatatacgttttattaat 27850993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 19750131 - 19750275
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    |||||||||||||||||| || | |||||||||||||| |||||||||||  | ||||||||||| ||||||||||| | || |||||||||||||||||    
T  19750131 ttaagtgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaat 19750230  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||||||||||||| ||| ||||| || ||||||| |||||||    
T  19750231 aggatctatggtggacaacttttaagatttgtccaccatagacat 19750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 19789675 - 19789531
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    |||||||||||||||||| || | |||||||||||||| |||||||||||  | ||||||||||| ||||||||||| | || |||||||||||||||||    
T  19789675 ttaagtgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaat 19789576  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||||||||||||| ||| ||||| || ||||||| |||||||    
T  19789575 aggatctatggtggacaacttttaagatttgtccaccatagacat 19789531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 52240091 - 52239932
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    |||| |||||| |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||     
T  52240091 aaaaaatcaaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaaccc 52239992  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |  | ||||||||||||||||||| ||||  ||| | |||||||  ||||| ||||||||    
T  52239991 ttggaatttatttggcaaacggagaaaaacctgaagaaccaaaacgtacgttttattaat 52239932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 1794622 - 1794481
Alignment:
Q  79 gatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgag-ttaaacttaaccgtga 177  Q
    ||||||| |||| ||||||||| | |||||| | ||||||||||||||||||||||||||||||||| || |||||||||| | |||||||||||||| |    
T  1794622 gatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccaccatatacatcatttgggattaaacttaaccgtta 1794523  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaag 219  Q
    ||||||||||| ||||| ||||||||| ||||||| ||||||    
T  1794522 ggatttatttgacaaacagaggaaaaagtgagggatcaaaag 1794481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 56085625 - 56085482
Alignment:
Q  9 ttaagtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||||||||||||||  | | |||| ||||||| |  |||||||||||||  |||||||||| |||| |||||| |||| |||||||||||||||||    
T  56085625 ttaagtgttgatggttcactgtaagataaaatacacatgtgtgatccaacggtcatccttttaaaaaaaa-atcaaacggtttaaattaaaataattaat 56085527  T
Q  109 aggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||    
T  56085526 aggatctatggtggaccactcttaaggttagtccaccatagacat 56085482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 75 - 203
Target Start/End: Original strand, 15449977 - 15450105
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaacc 173  Q
    |||||| ||||  ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||    
T  15449977 aaaagagcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaacttaacc 15450076  T
Q  174 gtgaggatttatttggcaaacggaggaaaa 203  Q
    || | |||||||||||||||||||||||||    
T  15450077 gt-aagatttatttggcaaacggaggaaaa 15450105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 234
Target Start/End: Complemental strand, 6348392 - 6348210
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtag 149  Q
    ||||||||||||  || || | || ||||||||||| ||||||||||| ||  ||||||| | |||| |||||||||||||||||||||||||||| |||    
T  6348392 tgatccaacggtcgtctttcttaaaaaaagatcaaagggttaaaattagaaatattaataaggtctacggtggaccactcttaaggttggtccaccatag 6348293  T
Q  150 acatcatttga-gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |   ||||||| ||||||||||||| | || ||||||||| ||||| ||||||||| ||||| |||||||| ||||| ||||||||    
T  6348292 a---catttgaggttaaacttaaccatcagaatttatttgacaaacagaggaaaaagtgaggaaccaaaaggtacgttttattaat 6348210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 23202043 - 23201917
Alignment:
Q  92 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggca 191  Q
    ||||||||||||||||||||| |||||||| ||||||||||| | || |||||| || |||||||||   ||||||||||| ||  ||||||||||||||    
T  23202043 aaattaaaataattaataggacctatggtgtaccactcttaaagatgatccaccataaacatcatttttattaaacttaacggttgggatttatttggca 23201944  T
Q  192 aacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||  |||||||||||||    
T  23201943 aacggaggaaaaggtgagggaccaaaa 23201917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 203
Target Start/End: Complemental strand, 13165717 - 13165581
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaa 165  Q
    |||||||| ||||||||||| |||| |||||||||||||||||    ||||||||||||||||||||||||||||||||| |||| ||  ||  ||||||    
T  13165717 cttttaaaaaaaagatcaaacggtttaaattaaaataattaatgaagtctatggtggaccactcttaaggttggtccaccatagaaat--ttgaagttaa 13165620  T
Q  166 acttaaccgt-gaggatttatttggcaaacggaggaaaa 203  Q
    ||||||| ||  |||||||||||| ||||||||||||||    
T  13165619 acttaacagtcaaggatttatttgacaaacggaggaaaa 13165581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 11968713 - 11968582
Alignment:
Q  87 ggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatt 186  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| || ||||||||| || || |   | |||||||    
T  11968713 ggtttaaattaaaataattaataggatctatgatggaccactcttaaggttggtccatcatagacataatctgagttaaagttgacagccggaatttatt 11968614  T
Q  187 tggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |  ||||||||| ||||  |||||||||||||    
T  11968613 ttacaaacggagcaaaatctgagggaccaaaa 11968582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 234
Target Start/End: Complemental strand, 42871315 - 42871150
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaa 166  Q
    ||||||| || | ||| ||| ||| ||||||||  |||||||||| |||| ||||||| |    ||| |||| ||||||||||||||  || || |||||    
T  42871315 ttttaaaaaataaatcgaatagtttaaattaaagaaattaatagggtctacggtggactatatataatgttgatccaccgtagacat--ttggaattaaa 42871218  T
Q  167 cttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||    
T  42871217 cttaacagtcaggatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaat 42871150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 53432300 - 53432119
Alignment:
Q  51 gatccaacggttctcctt-ttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtag 149  Q
    ||||||||||| ||| || ||||| ||||||||||| |||||||||| ||| |||||||| | | |||||||  |||||||||| |||||| |||| |||    
T  53432300 gatccaacggtcctctttcttaaaaaaaagatcaaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccatag 53432201  T
Q  150 acatcatttgagttaaacttaaccgtga-ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttatta 232  Q
    ||||  || | ||||||||||||||| | ||||||||||| | |||| ||| ||| |||||||||||||| ||| || ||||||    
T  53432200 acat--ttggggttaaacttaaccgtcagggatttatttgaccaacgaaggcaaacttgagggaccaaaacataagttttatta 53432119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 6349492 - 6349614
Alignment:
Q  113 tctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgaggg 211  Q
    |||||||||||||||||||||||||| |||||| || ||||||||| | ||||||||||||  |  |||| ||||||| ||||||| |||||  ||||||    
T  6349492 tctatggtggaccactcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgaggg 6349591  T
Q  212 accaaaagatacgtgttattaat 234  Q
    |||||||| ||||| ||||||||    
T  6349592 accaaaaggtacgttttattaat 6349614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 44498674 - 44498596
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| |||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  44498674 aaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacat 44498596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 40723445 - 40723329
Alignment:
Q  70 taaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttga-gttaaact 168  Q
    |||| ||||||||||| | |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || |   ||||||| ||||||||    
T  40723445 taaaaaaaagatcaaacgattaacatttaaataattaataggatctatggtagaccactcttaaggttggtccaccatata---catttgaggttaaact 40723349  T
Q  169 taaccgtgaggatttatttg 188  Q
    |||| ||  |||||||||||    
T  40723348 taacagtatggatttatttg 40723329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 53435656 - 53435798
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    ||||||||||| |||||||||| ||| |||||||    |||| |||||||||||||||||||||||| ||| |||||||  ||  |||||||||||||||    
T  53435656 aaaagatcaaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccatagacat--ttaaagttaaacttaaccg 53435753  T
Q  175 t-gaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |  |||||||||||| | |||||||| ||| ||||||| ||||||    
T  53435754 tcaaggatttatttgaccaacggaggtaaacttgaggggccaaaa 53435798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 4871704 - 4871629
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| ||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||    
T  4871704 agattaaaaggtttaaattaaaataattaataggatctacggtggaccactctttaggttggtccaccatagacat 4871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 390345 - 390272
Alignment:
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||| || ||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||    
T  390345 gttaaacttaacagtcaggatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaat 390272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 1587395 - 1587237
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaac-ttaacc 173  Q
    ||||||||||| |||||| ||||| | |||||||| | | || | |||| |||| |||| ||||||| ||  |||||||  || ||||||||  ||||||    
T  1587395 aaaagatcaaacggttaagattaacaaaattaataaggtatacgatggaacacttttaaagttggtctactatagacat--ttagagttaaaagttaacc 1587298  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
     |  ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  1587297 atcgggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaat 1587237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 1829966 - 1829808
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaac-ttaacc 173  Q
    |||| ||||||||||||| ||||| | |||||||| | |||| | ||||||||| |||| ||||||||||  |||||||  || ||||||||  |||||     
T  1829966 aaaaaatcaaatggttaagattaataaaattaataaggtctacgatggaccacttttaaagttggtccacgatagacat--ttagagttaaaagttaaca 1829869  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||  | ||||||||| |||||| |||||||| |||||||| ||||||||||| ||||||||    
T  1829868 gtcggaatttatttgacaaacgtaggaaaaagtgagggactaaaagatacgttttattaat 1829808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 56157399 - 56157468
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccac 144  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  56157399 aaaagatcaaatagttaaagttaaaaaaattaataggatctatggtggaacactcttaagattggtccac 56157468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 13166665 - 13166809
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaac 167  Q
    |||||| |||| |||||| |||||||||| |||  ||||||    ||||||||||| |||||||| |||||||||| | |||||||  ||  ||||||||    
T  13166665 tttaaaaaaaatatcaaacggttaaaatttaaaatattaatgaattctatggtggatcactcttacggttggtccatcatagacat--ttgaagttaaac 13166762  T
Q  168 ttaaccgtga-ggatttatttggcaaacggaggaaaaattgagggac 213  Q
    ||||| || | |||||||||||||||||||| |||||| ||||||||    
T  13166763 ttaacagtcaaggatttatttggcaaacggatgaaaaagtgagggac 13166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 42810118 - 42810264
Alignment:
Q  87 ggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatt 186  Q
    |||| ||||||||| | |||||| | |||||||||||| ||||||||| ||||| |||| |||||||| |  | ||||||||||||    ||||||||||    
T  42810118 ggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacatc-tgggggttaaacttaacaccaaggatttatt 42810216  T
Q  187 tggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||||  ||||||||  |||  ||||| ||||||||    
T  42810217 tggcaaacggaggaaaatgtgagggacttaaaagtacgttttattaat 42810264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 52963743 - 52963624
Alignment:
Q  113 tctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgaggga 212  Q
    |||||| ||||||||| |||||| ||||||||| |||||||  || |||||||| ||||| ||   |||||||||| ||||||||| |||| ||||||||    
T  52963743 tctatgatggaccacttttaaggctggtccaccatagacat--ttggagttaaagttaacagtcgagatttatttgacaaacggagaaaaacttgaggga 52963646  T
Q  213 ccaaaagatacgtgttattaat 234  Q
    |||||| |||||  ||||||||    
T  52963645 ccaaaacatacgatttattaat 52963624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 7053390 - 7053321
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccac 144  Q
    ||||||||||| | || ||||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  7053390 aaaagatcaaacgatttaaattaaaaaaattaataggatctatggtggatcactcttaagattggtccac 7053321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 134
Target Start/End: Complemental strand, 26630044 - 26629944
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactctta 132  Q
    |||| ||||||||||||| ||| || |||  |||||| ||| |||||||||||  ||| | ||||||||||||||||||| |||||||||||||||||||    
T  26630044 gataaaatacacctacgtaatctaatggtcatcctttaaaa-aaaagatcaaacagtttacattaaaataattaataggacctatggtggaccactctta 26629946  T
Q  133 ag 134  Q
    ||    
T  26629945 ag 26629944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 27847889 - 27847733
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct-taaggttggtccaccgtagacatcatttgagttaaacttaacc 173  Q
    ||||||||||| |||||||||| ||| |||||||| | |||||||||||| | ||| |||  |||| ||||| || ||||  || | |||||||||||||    
T  27847889 aaaagatcaaagggttaaaattgaaa-aattaataaggtctatggtggacta-tctataatcttggcccaccatatacat--ttggggttaaacttaacc 27847794  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||  |||||||||||||||||||| |||||||| ||||||| ||| |||| | ||||||||    
T  27847793 gtctggatttatttggcaaacggaagaaaaattaagggaccgaaaaatacattttattaat 27847733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 4714233 - 4714116
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    |||||||||||||||||||||| |||  ||||||    |||||||||||||||||||||||||| |||||| |||||||  ||  ||||||||||||  |    
T  4714233 aaaagatcaaatggttaaaatttaaaatattaatgaagtctatggtggaccactcttaaggttgatccaccatagacat--ttgaagttaaacttaatag 4714136  T
Q  175 t-gaggatttatttggcaaa 193  Q
    | || |||||||||||||||    
T  4714135 tcgatgatttatttggcaaa 4714116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 218
Target Start/End: Original strand, 11438476 - 11438613
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgag- 178  Q
    ||||||||||| ||||||||  |||||||||| | |||||||||||||    |  |||||||||||||||||||  || | |||||||||||  || ||     
T  11438476 atcaaatggtttaaattaaagaaattaatagggtttatggtggaccacctacactgttggtccaccgtagacat--ttggggttaaacttaaaagtcaga 11438573  T
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||| ||||| |||||||||| |||||||||||||    
T  11438574 gatttatttagcaaatggaggaaaaagtgagggaccaaaa 11438613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 36845664 - 36845557
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactctta 132  Q
    |||| ||||||||| ||| |||||| |||  || ||||||| |||| ||||||  ||| | ||||||||||||||||||| |||||||||||||||||||    
T  36845664 gataaaatacacctgcgtaatccaatggtcatc-ttttaaaaaaaatatcaaacagtttacattaaaataattaataggacctatggtggaccactctta 36845566  T
Q  133 aggttggtc 141  Q
    | |||||||    
T  36845565 atgttggtc 36845557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 52138683 - 52138771
Alignment:
Q  63 ctccttttaaagaaaaga-tcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtaga 150  Q
    ||||||||||| |||| | ||||| |||| |||||| |||||||||||||||||||||||||||| |||||| ||||||| ||| ||||    
T  52138683 ctccttttaaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccattcttaaagttggtctaccataga 52138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 145
Target Start/End: Original strand, 49896462 - 49896557
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    ||||| || ||||||| ||| | | |||| |||||| |||| |||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  49896462 tgatctaatggttctcttttaataaaaaatatcaaacggtttaaattaaaataattaacaggatctacagtggaccactctttaggttggtccacc 49896557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 393568 - 393699
Alignment:
Q  102 aattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgagg-atttatttggcaaacggagga 200  Q
    |||||||| | |||| | ||||||||| |||||||||||||||  || ||||  || || ||||| ||||| ||  || ||||||||||||||||||| |    
T  393568 aattaataaggtctacgatggaccacttttaaggttggtccactataaacat--ttagaattaaagttaacagtccgggatttatttggcaaacggagaa 393665  T
Q  201 aaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||| |||||||||||||||||| | ||||||||    
T  393666 aaaagtgagggaccaaaagatactttttattaat 393699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 26496212 - 26496290
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| |||||| |||| |||||| |||||||||||||||||||||||||||| | |||| || |||||||| |||||||    
T  26496212 aaaatatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat 26496290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 1188954 - 1188898
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||    
T  1188954 ggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaat 1188898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 34326926 - 34326870
Alignment:
Q  89 ttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    |||||||| |||||||||||||||||||| || |||||||||||| |||||||||||    
T  34326926 ttaaaatttaaataattaataggatctatagtagaccactcttaaagttggtccacc 34326870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 1520065 - 1519970
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccact 128  Q
    |||| ||||||| ||||| ||| || |||  |||||||||| | |  |||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  1520065 gataaaatacacttacgtaatctaatggtcatccttttaaaaatataatcaaacggtttaaattaaaataattaataggatctatggtggatcact 1519970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 1588045 - 1588128
Alignment:
Q  130 ttaaggttggtccaccgtagacatcatttgag-ttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgaggga 212  Q
    |||||||||||| ||| ||||||||||||| | ||||||||||| || |  |||||||||| |||||||||||||| |||||||    
T  1588045 ttaaggttggtctaccatagacatcatttggggttaaacttaacagtcataatttatttggtaaacggaggaaaaagtgaggga 1588128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 37882944 - 37882889
Alignment:
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||    
T  37882944 gatttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaat 37882889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 2311052 - 2310978
Alignment:
Q  160 agttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||| ||||| || |||||||||||||||| ||||||||||  |||||||||||||  ||||| ||||||||    
T  2311052 agttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaat 2310978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 218
Target Start/End: Original strand, 7708702 - 7708833
Alignment:
Q  85 atggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggattta 184  Q
    ||||||| |||||| | |||||||| | |||||| || |||||| |||||||||||||||| |||| ||  || |||||||| |||||  |  |||||||    
T  7708702 atggttagaattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatat--ttagagttaaagttaacacttgggattta 7708799  T
Q  185 tttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||| ||| ||||  |||||||| ||||    
T  7708800 tttggcaaacagagaaaaaggtgagggactaaaa 7708833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 23103901 - 23103962
Alignment:
Q  64 tccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||||  |||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  23103901 tccttttaaatcaaagatcaaacggtttaaattaaaa-aattaataggatctatggtggacca 23103962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 24426448 - 24426394
Alignment:
Q  180 atttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  24426448 atttttttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaat 24426394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 45535268 - 45535207
Alignment:
Q  64 tccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    |||||||||| |||||||||||  ||| ||||||||| |||||||||||||||||||||||||    
T  45535268 tccttttaaataaaagatcaaacagtttaaattaaaa-aattaataggatctatggtggacca 45535207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 31965947 - 31965906
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  31965947 aggatttatttggcaaacggaggaaaaagtgagggaccaaaa 31965906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 36243732 - 36243663
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccac 144  Q
    ||||||||||| ||||||| |||||| | | ||||| |||||||||||| |||||||||| |||||||||    
T  36243732 aaaagatcaaacggttaaagttaaaaaattcaatagaatctatggtggaacactcttaagattggtccac 36243663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 37884265 - 37884338
Alignment:
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||| ||  ||||||||||||||||||||||||||| | | |||||||||| ||| | ||||||||    
T  37884265 gttaaacttaacagtctggatttatttggcaaacggaggaaaaagtaaaggaccaaaaggtacattttattaat 37884338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 218
Target Start/End: Original strand, 13533140 - 13533305
Alignment:
Q  50 tgatccaacggttctc-cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct-taaggttggtccaccgt 147  Q
    |||||||||||| ||| || ||||| |||||||||||||||||||||| ||| |||||||| | |||||||||||| | ||| ||| ||||||||||| |    
T  13533140 tgatccaacggtcctctctcttaaa-aaaagatcaaatggttaaaattgaaa-aattaataaggtctatggtggacta-tctataatgttggtccaccat 13533236  T
Q  148 agacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||  ||  ||||||| ||||| ||  ||||||||||| |  ||||||  |||  |||||||||||||    
T  13533237 agacat--ttgaagttaaatttaacagtctggatttatttgaccgacggagacaaacgtgagggaccaaaa 13533305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 145
Target Start/End: Original strand, 28590782 - 28590877
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    ||||| |||||| ||| ||| | | |||||||||||  ||| | ||||||||||||||||||||||||| || | ||||||||| |||||| ||||    
T  28590782 tgatctaacggtactcttttaataaaaaagatcaaacagtttatattaaaataattaataggatctatgatgaatcactcttaaagttggttcacc 28590877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 33231599 - 33231525
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||||| ||||||||| |||||||||  | ||||||||||||||  ||||||| ||||||| |||||||    
T  33231599 agatcaaatggttgaaattaaaa-aattaatagagtttatggtggaccacttctaaggtttgtccaccatagacat 33231525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 35350021 - 35350064
Alignment:
Q  84 aatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  35350021 aatggttaaaattaaaagaattaataagatctatggtggaccac 35350064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 38370556 - 38370441
Alignment:
Q  13 gtgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctcctttt-aaagaaaagatcaaatggttaaaattaaaataattaatagg 111  Q
    |||||||| ||||| || |||||| || | || ||  ||||||||| |||||| |||| ||| |||| |||||| |||||||||||||  |||| ||| |    
T  38370556 gtgttgattgttcaccgtatgatacaacagacatatatgatccaacagttctcttttttaaaaaaaatatcaaagggttaaaattaaatgaatttataag 38370457  T
Q  112 atctatggtggaccac 127  Q
    ||||||||||||||||    
T  38370456 atctatggtggaccac 38370441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 39057680 - 39057723
Alignment:
Q  84 aatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  39057680 aatggttaaaattaaaagaattaataagatctatggtggaccac 39057723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 26393010 - 26393111
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||||| | ||| ||||||  |||| ||||||||||||||||||||| | ||| || | |||||||||||||||   ||| |||||| |||| |||||    
T  26393010 atccaacgatcctctttttaactaaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggtggaccacctataatgttggttcaccttagac 26393109  T
Q  152 at 153  Q
    ||    
T  26393110 at 26393111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 31968396 - 31968453
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||||| ||||||||| ||| |||||||||  ||||| ||||||||    
T  31968396 aggatttatttggcaaacagaggaaaaagtgaaggaccaaaacgtacgttttattaat 31968453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 42872303 - 42872344
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||| ||||||||||||||||||||||| |||||||||||||    
T  42872303 aggaattatttggcaaacggaggaaaaagtgagggaccaaaa 42872344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 234
Target Start/End: Original strand, 52241063 - 52241216
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||| ||||||||| | || ||||| | |||||  ||||||||| |||||| ||||| ||| |||| ||  || |||||||| ||||| ||      
T  52241063 agatcgaatggataaaattaacaaaactaataaggtctatcatggaccacttttaaggatggtc-accatagatat--ttggagttaaagttaacggtcg 52241159  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    | ||||||||||||||||||||||||  ||||| | |||||  ||||| ||||||||    
T  52241160 gaatttatttggcaaacggaggaaaagatgaggaatcaaaacgtacgttttattaat 52241216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 56000520 - 56000419
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||||| | ||| ||||||  |||| ||||||||||||||||||||| | ||| || | |||| ||||||||||   ||| ||||||||||| |||||    
T  56000520 atccaacgatcctctttttaatcaaaatatcaaatggttaaaattaaaaaacttagtaaggtctacggtggaccacctataatgttggtccaccttagac 56000421  T
Q  152 at 153  Q
    ||    
T  56000420 at 56000419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 33232678 - 33232742
Alignment:
Q  154 catttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||| ||||| |  | |||||||||||||||||||||||||  |||||||| ||||    
T  33232678 catttgagttaaagttaacggaaaagatttatttggcaaacggaggaaaatgtgagggactaaaa 33232742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 44503684 - 44503724
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  44503684 ggatttatttggcaaacagaggaaaaagtgagggaccaaaa 44503724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 53205488 - 53205528
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  53205488 ggatttatttggcaaacggaggaaaaagtgagggactaaaa 53205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 54866617 - 54866661
Alignment:
Q  159 gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaa 203  Q
    |||||||||||||| || | |||||||||||||||||||||||||    
T  54866617 gagttaaacttaacagtcatgatttatttggcaaacggaggaaaa 54866661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 53401351 - 53401441
Alignment:
Q  38 aatacacctacgtgatccaacggttctcctttt-aaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccact 128  Q
    |||| |||||| ||||||||||||| ||  ||| ||| |||||||||||  ||||||||||||| | |||||||| |||||||| |||||||    
T  53401351 aatagacctacatgatccaacggttttctatttgaaaaaaaagatcaaacagttaaaattaaaaaatttaatagg-tctatggtagaccact 53401441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 6140242 - 6140315
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggac 124  Q
    |||||||||||| |||| |||||| |||||||||||  ||||||| ||||| | |||||| | ||||||||||||    
T  6140242 tgatccaacggt-ctccatttaaaaaaaagatcaaactgttaaaaataaaagatttaataaggtctatggtggac 6140315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 8682756 - 8682809
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaag 134  Q
    |||||| |||| ||||||||| |||||||| |||||||| |||||||||||||||    
T  8682756 atcaaagggttgaaattaaaa-aattaatatgatctatgatggaccactcttaag 8682809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 36604604 - 36604646
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaat 108  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||    
T  36604604 cttttaacgaaaaaatcaaatggttaaaattaaaaaaattaat 36604646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 36604737 - 36604771
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaa 100  Q
    ||||||||||||| |||||||||||||||||||||    
T  36604737 cttttaaagaaaaaatcaaatggttaaaattaaaa 36604771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 40792914 - 40792822
Alignment:
Q  122 gaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||| |||||||||||||||  |||||||  ||  ||||||| |||||  |  ||||||||||||||||||||| ||||  |||||||||||||    
T  40792914 gaccacttttaaggttggtccactatagacat--ttaaagttaaagttaac--tcgggatttatttggcaaacggagaaaaatctgagggaccaaaa 40792822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 3533491 - 3533564
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacc 125  Q
    |||||||| | ||| ||||||  |||| ||||||||||||||||||||| | ||| || | |||||||||||||    
T  3533491 atccaacgatcctctttttaatcaaaatatcaaatggttaaaattaaaaaacttagtaaggtctatggtggacc 3533564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 41401602 - 41401679
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||| |||||||||| |||| || |||| ||| ||||||||||||||||  |||| ||| | | |||||||||||||    
T  41401602 tgatcaaacggttctctttttgaaaaaaatatcgaatggttaaaattaaatgaatttataaggtttatggtggaccac 41401679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 43894324 - 43894279
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaatagg 111  Q
    ||||||||||||| ||||||||||||| ||||||| | ||||||||    
T  43894324 cttttaaagaaaaaatcaaatggttaagattaaaaaatttaatagg 43894279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 44302939 - 44302878
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    |||||||||||   ||||||||||||||||||||| | |||||| | ||||||||| |||||    
T  44302939 cttttaaagaatcaatcaaatggttaaaattaaaaaatttaatacggtctatggtgaaccac 44302878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 1831268 - 1831324
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||  ||| |||||||||| |||||||||||||  ||||| ||||||||    
T  1831268 ggatttatttgaaaaatggaggaaaaaatgagggaccaaaatgtacgttttattaat 1831324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 2162822 - 2162770
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    |||||||||||  ||||||||| ||| |||||||| | |||||||||||||||    
T  2162822 aaaagatcaaagtgttaaaattgaaaaaattaataaggtctatggtggaccac 2162770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 4129104 - 4129064
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||||||| ||||| | |||||||||||    
T  4129104 ggatttatttggcaaacggagaaaaaagtaagggaccaaaa 4129064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 10168788 - 10168828
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||||||||||||  |||||||| ||||    
T  10168788 ggatttatttggcaaacggaggaaaatgtgagggactaaaa 10168828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 50548204 - 50548268
Alignment:
Q  154 catttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||| || || |  |||||||||||||||||| ||||||||  |||||||| ||||    
T  50548204 catttgagttaaagttgacggaaaggatttatttggcaaacagaggaaaatgtgagggactaaaa 50548268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 53204472 - 53204440
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagg 210  Q
    ||||||||||||||||||||| |||||||||||    
T  53204472 ggatttatttggcaaacggagaaaaaattgagg 53204440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 234
Target Start/End: Original strand, 45584929 - 45585070
Alignment:
Q  94 attaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgag-ttaaacttaaccgtgaggatttatttggcaa 192  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||| | ||||||||||| || ||||||||||||||||    
T  45584929 attaaaataattaataggatctatggtggagcactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtcaggatttatttggcaa 45585028  T
Q  193 acggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||| ||| |||||||||| ||||| ||||||||    
T  45585029 acggaggaaaaagtgaaggaccaaaaggtacgttttattaat 45585070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 52 - 218
Target Start/End: Complemental strand, 15232988 - 15232823
Alignment:
Q  52 atccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagac 151  Q
    |||||| ||||||| ||||||| |||| |||||| |||| | ||||||||||||||||||||||||| ||||||||| |||| ||||||||||  || ||    
T  15232988 atccaatggttctc-ttttaaaaaaaatatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccactatatac 15232890  T
Q  152 atcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||| |||||||||||| || | |||||||||||||||| ||||||||  |||||||| ||||    
T  15232889 atcatttgggttaaacttaacggtcatgatttatttggcaaacagaggaaaatgtgagggactaaaa 15232823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 16964992 - 16965157
Alignment:
Q  38 aatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggtt 137  Q
    |||| |||| ||| || ||| ||||||| ||| |||||||| | |||| |||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  16964992 aatagacctgcgtaatacaatggttctcttttaaaagaaaaaa-caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagtt 16965090  T
Q  138 ggtccaccgtagacatcattt-gagttaaacttaaccgtgaggatttatttggcaaacggaggaaaa 203  Q
    |||||||| || ||||||||| | ||||||||||||| |  | |||||||||  ||||||| |||||    
T  16965091 ggtccaccatatacatcatttggggttaaacttaaccatcggaatttatttgataaacggaagaaaa 16965157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 46110501 - 46110337
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaac 167  Q
    |||||| ||||||||||| |||||||||||| | |||||||| | |||| | |||||||||||||||||||||||||| |||| ||  || ||||||||     
T  46110501 tttaaaaaaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactcttaaggttggtccaccatagatat--ttagagttaaag 46110404  T
Q  168 ttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||| ||   ||||||||| |||||||||| |||| ||||| ||||||||  ||||| ||||||||    
T  46110403 ttaacagtcgagatttatttagcaaacggagaaaaacttgagtgaccaaaaagtacgttttattaat 46110337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 52078006 - 52078125
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactctta 132  Q
    |||| ||||||| ||||| ||| || ||| |||||||| || |||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||    
T  52078006 gataaaatacacttacgtaatctaatggtcctcctttttaaaaaaa-atcaaacggttaaaattaaaataattaataggatctatggtgtatcactctta 52078104  T
Q  133 aggttggtccaccgtagacat 153  Q
    |||||||| |||| |||||||    
T  52078105 aggttggttcaccatagacat 52078125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 27814493 - 27814347
Alignment:
Q  87 ggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaac-ttaaccgtgaggatttat 185  Q
    |||||||||||| | |||||||| | | || | ||||||||| |||| ||||||||||| |||||||  || ||||||||  ||||||||  ||||||||    
T  27814493 ggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagacat--ttagagttaaaagttaaccgtcgggatttat 27814396  T
Q  186 ttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||| ||||||||| |||||||||||||| ||||| ||||||||    
T  27814395 ttggcaaacagaggaaaaaatgagggaccaaaaggtacgttttattaat 27814347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 49801831 - 49801712
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttga-gttaaacttaacc 173  Q
    |||| |||||| |||| ||||||||||||||||||| || |||||||||||||| |||||||||||  |||||| ||||||||||| |||||| |||||     
T  49801831 aaaaaatcaaacggtttaaattaaaataattaatagaatttatggtggaccacttttaaggttggtttaccgtaaacatcatttgaggttaaaattaaca 49801732  T
Q  174 gtgaggatttatttggcaaac 194  Q
    ||  |||||||||||||||||    
T  49801731 gt-cggatttatttggcaaac 49801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 50444602 - 50444759
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg 174  Q
    ||||||||||| ||||||||| || | |||||||| | |||| | ||||| |||||||||||||||||| | ||||| |  || |||||||| ||||| |    
T  50444602 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaacatagacgtt-ttggagttaaagttaacgg 50444699  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |  ||||||||||||||| ||||||||||| |||||||||||||  ||||| ||||||||    
T  50444700 tttggatttatttggcaatcggaggaaaaaatgagggaccaaaatgtacgttttattaat 50444759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 15746673 - 15746811
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgt-g 176  Q
    |||||||| |||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| |||||||  ||  ||||||||||||| || |    
T  15746673 agatcaaagggttaaaattaaaaga-ttaataggatctatggtggaccactcttaagattggtccaccatagacat--ttgaagttaaacttaacagtgg 15746769  T
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    | |||||||||| |  ||||||  | |||| |||||||||||    
T  15746770 atgatttatttgactgacggagatacaattaagggaccaaaa 15746811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 13147336 - 13147397
Alignment:
Q  92 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  13147336 aaattaaaataattaataggatctatggtggaccactattaaggttggtccaccatagacat 13147397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 16964043 - 16963905
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| || |||||||||||| | |||||||| | |||||| ||||||||| |||||||||||||| | || ||||  || |||||||| ||||| || |    
T  16964043 agatcgaagggttaaaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcataaacat--ttagagttaaagttaacagtca 16963946  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    | ||||||||||||||||||||||||  |||||||| ||||    
T  16963945 gcatttatttggcaaacggaggaaaagatgagggactaaaa 16963905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 48096935 - 48097046
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttga-gttaaacttaacc 173  Q
    ||||||||||| | |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || |   ||||||| ||||||||||||     
T  48096935 aaaagatcaaacgattaatatttaaataattaataggatctatggtagaccactcttaaggttggtccaccatata---catttgaggttaaacttaaca 48097031  T
Q  174 gtgaggatttatttg 188  Q
    ||  |||||||||||    
T  48097032 gtagggatttatttg 48097046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 15072693 - 15072851
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgag-ttaaacttaacc 173  Q
    |||||||||||   || ||||||| | |||||||||  |||| |||||||||||||| ||||||||||||| |||||||   ||||| ||||| |||||     
T  15072693 aaaagatcaaacaatttaaattaagaaaattaatagagtctacggtggaccactctttaggttggtccaccatagacat---ttgaggttaaagttaaca 15072789  T
Q  174 gtga-ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |  | ||||||||||||||||||||||||||| | |||||||||||  ||||| ||||||||    
T  15072790 gacatggatttatttggcaaacggaggaaaaaataagggaccaaaatgtacgttttattaat 15072851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 210
Target Start/End: Original strand, 44999367 - 44999499
Alignment:
Q  77 aagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccg-t 175  Q
    |||||||||||||| || ||||||||||||||| ||||||||||| |||||||||| | |||||||||| |||||||  ||   |||||| ||||| | |    
T  44999367 aagatcaaatggtttaagttaaaataattaataagatctatggtgaaccactcttacgattggtccaccatagacat--ttaaggttaaagttaacagct 44999464  T
Q  176 gaggatttatttggcaaacggaggaaaaattgagg 210  Q
      ||||||||||||||||| ||||||||| |||||    
T  44999465 agggatttatttggcaaacagaggaaaaaatgagg 44999499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 9226118 - 9226196
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||||||||   || ||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  9226118 aaaagatcaaacaatttaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatagacat 9226196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 14478491 - 14478401
Alignment:
Q  63 ctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| |||| |||||| |||| |||||| |||||||||||||||||||||||||||| | |||| || |||||||| |||||||    
T  14478491 ctccttttaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat 14478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 3617417 - 3617478
Alignment:
Q  92 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  3617417 aaattaaaataattaataggatctatagtggaccactcttaaggttggttcaccatagacat 3617478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 35943289 - 35943508
Alignment:
Q  14 tgttgatggttcaacgcatgatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggtta-aaattaaaataattaatagga 112  Q
    |||| |||||||| || | |||| |||| |||| ||| || ||| |||  |||||| ||| ||||||||||| ||||  ||| ||||| | |||||| |     
T  35943289 tgttaatggttcatcgtaagataaaatagacctgcgtaattcaatggtcatcctttcaaa-aaaagatcaaacggttttaaaataaaaaatttaataagg 35943387  T
Q  113 tctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaac--cgtgaggatttatttggcaaacggaggaaaaattgagg 210  Q
    ||||||||||| ||||||||||||||||||||| |||||||  || | ||||||||||||  |  | |||||||||||||||||| |||||||| ||| |    
T  35943388 tctatggtggatcactcttaaggttggtccaccatagacat--ttagggttaaacttaacagccaggggatttatttggcaaacgaaggaaaaagtga-g 35943484  T
Q  211 gaccaaaagatacgtgttattaat 234  Q
    ||||||||  ||||| ||||||||    
T  35943485 gaccaaaatgtacgttttattaat 35943508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 41873875 - 41874037
Alignment:
Q  76 aaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaac-cg 174  Q
    |||||||||| |||||||||| ||| |||||||    ||||||||||||||||||||||||||||||||| |||||||  ||   ||||||||||||       
T  41873875 aaagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccatagacat--ttgtggttaaacttaacaac 41873972  T
Q  175 tgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaatgatga 239  Q
      ||||||||||||| |||||||||||||  | | || ||||||||||| | |||||||| ||||    
T  41873973 caaggatttatttggtaaacggaggaaaagctaaagggccaaaagatactttttattaattatga 41874037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 48527754 - 48527669
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||| |||||||||||  ||| |||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||| |||||||    
T  48527754 tttaaaaaaaagatcaaacagtttaaattaaaataattgataagatctatggtggaccactcttaaagttggtcgaccatagacat 48527669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 18821642 - 18821720
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||| ||||||| || ||| |||||||||||||| |||| |||||||||||||||| ||||||| |||||||    
T  18821642 aaaagatcaaacggttaaattttaaaaaattaataggatctttggtagaccactcttaaggttagtccaccatagacat 18821720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 13894833 - 13894760
Alignment:
Q  68 tttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtc 141  Q
    |||||| ||||||||||| |||| |||||||||||||||| |||||||||||| ||| |||||| |||||||||    
T  13894833 tttaaaaaaaagatcaaacggtttaaattaaaataattaacaggatctatggtagacaactctttaggttggtc 13894760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 52628861 - 52628934
Alignment:
Q  161 gttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||| ||   |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  52628861 gttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaat 52628934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 14471069 - 14470932
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaac-c 173  Q
    ||||||||||| ||| |||||| ||| |||||||    | ||||||||||||||||||||||||||||||  ||||| |  || | |||||||||||| |    
T  14471069 aaaagatcaaacggtcaaaatttaaaaaattaatgaagtttatggtggaccactcttaaggttggtccactatagacgt--ttggggttaaacttaacac 14470972  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggac 213  Q
       ||||||||||||||||||| |||||||| ||||||||    
T  14470971 cgaaggatttatttggcaaacgaaggaaaaagtgagggac 14470932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 14477699 - 14477852
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga-g 178  Q
    |||||| |||||||||| ||| |||||||    |||||||||||| ||||||||| ||| || ||| |||||||  || ||||||||||||||   || |    
T  14477699 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatctaccatagacat--ttagagttaaacttaacatcgaag 14477796  T
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||||||| ||||| ||||||||  |||  ||||| ||||||||    
T  14477797 gatttatttggcaaacggagaaaaaagtgagggacttaaacgtacgttttattaat 14477852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 23091527 - 23091406
Alignment:
Q  113 tctatggtggaccactcttaaggttggtccaccgtagacatcatttgag-ttaaacttaaccg--tgaggatttatttggcaaacggaggaaaaattgag 209  Q
    |||||||||||||||| |||| ||||||||||| |||||||   ||||| ||||||||||| |  |  ||||||||||||||||||||| ||||| ||||    
T  23091527 tctatggtggaccacttttaaagttggtccaccatagacat---ttgagattaaacttaacagactagggatttatttggcaaacggagaaaaaagtgag 23091431  T
Q  210 ggaccaaaagatacgtgttattaat 234  Q
     ||||||||  ||||| ||||||||    
T  23091430 tgaccaaaacgtacgttttattaat 23091406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 26802194 - 26802075
Alignment:
Q  34 atagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaa 133  Q
    |||||||| |||||| | ||| || ||| ||| ||| ||| |||  |||||| |||| |||||||||| ||||||| ||||||| |||||| ||||||||    
T  26802194 atagaatagacctacataatcaaatggtcctcttttaaaaaaaataatcaaacggtttaaattaaaatgattaatatgatctatagtggacaactcttaa 26802095  T
Q  134 ggttggtccaccgtagacat 153  Q
    ||||||| |||| |||||||    
T  26802094 ggttggttcaccttagacat 26802075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 51445803 - 51445725
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| |||||| |||| |||||| |||||||||||||||||||||||||||| | |||| |||| |||||| |||||||    
T  51445803 aaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagttgatccaccatagacat 51445725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 28050534 - 28050465
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccac 144  Q
    ||||||||||| ||||||| |||| | ||| |||||||||||||||||| |||||||||| |||||||||    
T  28050534 aaaagatcaaacggttaaagttaagaaaatcaataggatctatggtggaacactcttaagattggtccac 28050465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 9482646 - 9482590
Alignment:
Q  97 aaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||    
T  9482646 aaaataattaataagatctatggtgaaccactcttaaagttggtccactgtagacat 9482590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 15071453 - 15071397
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||    
T  15071453 ggatttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaat 15071397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 34350288 - 34350228
Alignment:
Q  113 tctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaac 172  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||||||    
T  34350288 tctatggtggaccactcttaaggttgatccaccatagacatcatttggggttaaacttaac 34350228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 5612946 - 5613041
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccact 128  Q
    |||| ||||||| ||||| ||| || |||  |||||||||| | |  |||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  5612946 gataaaatacacttacgtaatctaatggtcatccttttaaaaatataatcaaacggtttaaattaaaataattaataggatctatggtggatcact 5613041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 12666003 - 12665944
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaag 134  Q
    ||||||||||| |||| ||||||| | |||||||| ||||||||||||||||||||||||    
T  12666003 aaaagatcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaag 12665944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 46318521 - 46318576
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactct 130  Q
    ||||||||||| | || ||||||||||| |||||||||||||||||||||||||||    
T  46318521 aaaagatcaaacgatttaaattaaaatatttaataggatctatggtggaccactct 46318576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 6049340 - 6049406
Alignment:
Q  87 ggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||| |||||||||||||||| |||||||| ||||||||||| || || |||||||||| |||||||    
T  6049340 ggtttaaattaaaataattaacaggatctacggtggaccactatttagattggtccaccatagacat 6049406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 9485224 - 9485286
Alignment:
Q  92 aaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatc 154  Q
    |||||||||||||||||||||| ||||||  ||||||||||| |||| |||||| ||||||||    
T  9485224 aaattaaaataattaataggatttatggttaaccactcttaaagttgatccaccatagacatc 9485286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 49802846 - 49802940
Alignment:
Q  122 gaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||| ||||||||||| |||| |||||||  || ||||| || ||||||||  ||||||||||||||||||||| ||||  |||||||| ||||    
T  49802846 gaccacttttaaggttggtacaccatagacat--ttagagttgaagttaaccgtcgggatttatttggcaaacggagaaaaagatgagggactaaaa 49802940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 51300168 - 51300233
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacc 145  Q
    ||||||||||||||||| | | |||||||| | |||||||||||||||| |||| |||||||||||    
T  51300168 atcaaatggttaaaattcataaaattaataaggtctatggtggaccacttttaatgttggtccacc 51300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 46111493 - 46111549
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||||| |||||||| ||||| |||||||| ||||| ||||||||    
T  46111493 ggatttatttggcaaacgaaggaaaaaatgaggaaccaaaaggtacgttttattaat 46111549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 7306163 - 7306209
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  7306163 atcaaatggctaaaattaaaagaattaataagatctatggtggacca 7306209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 10722238 - 10722347
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactctta 132  Q
    |||| |||| ||||| || ||| || ||||||| |||||||  ||| ||| || |||| ||||||||| ||||| ||| ||||||| ||||||||||||     
T  10722238 gataaaataaacctatgtaatctaatggttctcattttaaaataaa-atctaaaggtttaaattaaaaaaattagtagaatctatgatggaccactcttt 10722336  T
Q  133 aggttggtcca 143  Q
    |||||||||||    
T  10722337 aggttggtcca 10722347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 234
Target Start/End: Original strand, 34351843 - 34352017
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtag 149  Q
    ||||||||||||  || || | || |||||| |||| ||||||||||| ||  ||||||| | | ||||||||||||||||||| ||||||||||| |||    
T  34351843 tgatccaacggtcgtctttcttaaaaaaagaccaaagggttaaaattagaaatattaataaggtttatggtggaccactcttaa-gttggtccaccatag 34351941  T
Q  150 acatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    || ||       ||||  |||||| | ||||||| |||| |||||| |||||||| |||||||||||||| ||| | ||||||||    
T  34351942 ac-tc-------ttaagtttaaccatcaggattt-tttgacaaacgtaggaaaaagtgagggaccaaaaggtacattttattaat 34352017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 15233949 - 15234086
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||| ||||||||||||||| | || ||||||| |||| | ||||||||||| ||| |||||| |   |||||||  ||  ||||||| | ||| ||      
T  15233949 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattatagacat--ttgaagttaaagt-aacagtcg 15234045  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    ||||||||||||||||||||||||||  |||||||| ||||    
T  15234046 ggatttatttggcaaacggaggaaaatgtgagggactaaaa 15234086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 44278353 - 44278410
Alignment:
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||| |||||||||||||||| ||||| |||||||||||||  ||||| ||||||||    
T  44278353 aggatctatttggcaaacggagaaaaaaatgagggaccaaaacgtacgttttattaat 44278410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 50678581 - 50678521
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| ||||||||||||||||||||| | |||||| | ||||||||| |||||    
T  50678581 cttttaaagaaaaaatcaaatggttaaaattaaaa-atttaatacggtctatggtgaaccac 50678521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 24499660 - 24499700
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  24499660 ggatttatttggtaaacggaggaaaaagtgagggaccaaaa 24499700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 27556490 - 27556431
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||  ||||||||||  ||| ||||||||| |||||||||||||||||||||||||    
T  27556490 cttttaaattaaagatcaaactgtttaaattaaaa-aattaataggatctatggtggacca 27556431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 26286666 - 26286571
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccact 128  Q
    |||| ||||||| ||||| ||| || |||  |||||||||| | |  |||||| |||| |||||||||||||||||||  ||||||||||| ||||    
T  26286666 gataaaatacacttacgtaatctaatggtcatccttttaaaaatataatcaaacggtttaaattaaaataattaatagagtctatggtggatcact 26286571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 26056044 - 26056105
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||| | ||||||||||||||||||||| | |||||| |  |||||||| |||||    
T  26056044 cttttaaagaataaatcaaatggttaaaattaaaaaatttaatacggcctatggtgaaccac 26056105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 40811486 - 40811410
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    |||||||||||| || | |||||| |||| |||||| |||||||| ||||| | |||||| | |||||||||||||||    
T  40811486 tgatccaacggt-cttcatttaaaaaaaatatcaaacggttaaaaataaaagatttaataaggtctatggtggaccac 40811410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 51299518 - 51299441
Alignment:
Q  50 tgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    |||||||| | ||||| ||||||| ||||||||||| |||| |||||||||   || ||| | |||||||||||||||    
T  51299518 tgatccaatgattctcattttaaataaaagatcaaagggtttaaattaaaaagttttataaggtctatggtggaccac 51299441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 10712042 - 10711935
Alignment:
Q  33 gatagaatacacctacgtgatccaacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactctta 132  Q
    |||| |||| ||||| || ||| || ||||||| |||||||  ||| ||| || |||| ||||||||| ||||| ||| || |||| ||||||||||||     
T  10712042 gataaaataaacctatgtaatctaatggttctcattttaaaataaa-atctaaaggtttaaattaaaaaaattagtagaatttatgatggaccactcttt 10711944  T
Q  133 aggttggtc 141  Q
    |||||||||    
T  10711943 aggttggtc 10711935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 16123398 - 16123358
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||||||| |||||| |||||||| ||||    
T  16123398 ggatttatttggcaaacggaagaaaaaatgagggactaaaa 16123358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 54086 - 54230
Alignment:
Q  75 aaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaacc 173  Q
    |||| ||||||  ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | |||| |||||||     
T  54086 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaaca 54185  T
Q  174 gtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    || | ||||||||||||||||||||||||| ||||||||||||||    
T  54186 gtcacgatttatttggcaaacggaggaaaatttgagggaccaaaa 54230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 52749 - 52663
Alignment:
Q  130 ttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    |||||||||||||||| || ||||  ||  ||||||| ||||| ||  ||||||||||||||||||||| ||||  |||||||||||||    
T  52749 ttaaggttggtccaccatatacat--ttaaagttaaagttaactgtcgggatttatttggcaaacggagaaaaatctgagggaccaaaa 52663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 79 - 234
Target Start/End: Original strand, 125137 - 125294
Alignment:
Q  79 gatcaaatggttaaaattaaaataatt-aataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgag-ttaaacttaaccgtg 176  Q
    ||||||| |||| ||||||||| |||| |||| | |||||||||||||||| |||||||||||||| | || |||||||||| | ||||||||||||||     
T  125137 gatcaaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttggtccatcatatacatcatttggggttaaacttaaccgtt 125236  T
Q  177 aggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  125237 aggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaat 125294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 67 - 234
Target Start/End: Complemental strand, 124188 - 124024
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaa 166  Q
    ||||||| || |||||||| | || ||||||| | | |||||| ||||||||||||||||||||||||||||||||||| |||| ||  || | ||||||    
T  124188 ttttaaaaaatagatcaaacgatttaaattaaca-atttaatacgatctatggtggaccactcttaaggttggtccaccatagatat--ttggggttaaa 124092  T
Q  167 cttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||||  ||||| ||||||||    
T  124091 cttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgttttattaat 124024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 108722 - 108568
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcattt-gagttaaacttaaccgtgag 178  Q
    |||||| |||| |||||| |||||||||||| ||||||||||||||||| |||||||||||||||| || | || |||| | |||||||||||| |  ||    
T  108722 atcaaaaggtttaaattataataattaatagcatctatggtggaccacttttaaggttggtccaccata-atattatttggggttaaacttaactgcaag 108624  T
Q  179 gatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||||||||||||| |||||||||| ||||||| |||||  ||||| ||||||||    
T  108623 gatttatttggcaaatggaggaaaaaatgagggatcaaaacgtacgttttattaat 108568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 234
Target Start/End: Original strand, 109652 - 109806
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    ||||||||||||||||||||| | |||||||| | |||| | ||||| | | |||||||||||||||| || ||||  ||  ||||||| ||||  ||      
T  109652 agatcaaatggttaaaattaacaaaattaataaggtctacgatggactatttttaaggttggtccaccatatacat--ttgaagttaaagttaatagttg 109749  T
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    ||||| ||||||||||  ||| ||||| |||||||| ||||  ||||| ||||||||    
T  109750 ggattcatttggcaaattgagaaaaaagtgagggactaaaatgtacgttttattaat 109806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 234
Target Start/End: Complemental strand, 21339 - 21182
Alignment:
Q  76 aaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgt 175  Q
    |||||||||| |||||||||| ||| |||||||    |||||||||||||||||| |||||||||||||| |||||||  ||   ||||||||||||       
T  21339 aaagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactctgaaggttggtccaccatagacat--ttgtggttaaacttaacaac 21242  T
Q  176 g-aggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaat 234  Q
    | | |||||||||||||||||||||||||| | ||||| |||||| ||| | ||||||||    
T  21241 gaatgatttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaat 21182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 218
Target Start/End: Complemental strand, 127660 - 127504
Alignment:
Q  60 gttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttg 159  Q
    |||||||||||||| |||| ||| || |||| |||||||||  |||||||||||||||||||||||||||||||||||| | |||| ||||   ||||||    
T  127660 gttctccttttaaaaaaaa-atctaacggtttaaattaaaaacattaataggatctatggtggaccactcttaaggttgtttcaccataga---catttg 127565  T
Q  160 a-gttaaacttaaccgtga-ggatttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    | |||||| ||||| || | ||||||||||| |  ||||||| |||  |||||||||||||    
T  127564 aggttaaagttaactgtcagggatttatttgaccgacggaggcaaacatgagggaccaaaa 127504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 576 - 652
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtcca 143  Q
    ||||||| || |||||||| |||| ||||||||| | |||||| | |||||||||||||||||||||||||||||||    
T  576 ttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtcca 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 190
Target Start/End: Complemental strand, 32790 - 32670
Alignment:
Q  70 taaagaaaagatcaaatggttaaaattaaaataat--taataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaac 167  Q
    |||| ||||||||||| |||| ||||||||| ||   |||||||||||||| |||||||||| ||||||||||||||| |||||||  ||   ||||||     
T  32790 taaaaaaaagatcaaacggtttaaattaaaaaaaaaataataggatctatgatggaccactcctaaggttggtccaccatagacat--ttaaggttaaag 32693  T
Q  168 ttaaccgtgaggatttatttggc 190  Q
    ||||| || ||||||||||||||    
T  32692 ttaacagttaggatttatttggc 32670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 63037 - 63176
Alignment:
Q  78 agatcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtga 177  Q
    |||||||| |||||||||| ||| |||||||    | |||||||||||| ||||||| ||| |||| | |||||||  ||  ||||||||||||| || |    
T  63037 agatcaaacggttaaaatttaaaaaattaatgaagtttatggtggaccattcttaagattgatccatcatagacat--ttgaagttaaacttaacagtca 63134  T
Q  178 gg-atttatttggcaaacggaggaaaaattgagggaccaaaa 218  Q
    || ||||||||||||||||||| ||||  |||||||| ||||    
T  63135 gggatttatttggcaaacggagaaaaatgtgagggactaaaa 63176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 8099 - 8171
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacat 153  Q
    |||||| |||| ||||||||||||||||||  ||||||| |||||| |||||||||||| |||||| |||||||    
T  8099 atcaaacggtttaaattaaaataattaatataatctatgatggacc-ctcttaaggttgatccaccatagacat 8171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 39798 - 39859
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggaccac 127  Q
    ||||||||||||| ||||||||||||||||||||| | |||||| | || |||||| |||||    
T  39798 cttttaaagaaaaaatcaaatggttaaaattaaaaaatttaatacggtccatggtgaaccac 39859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 2426 - 2537
Alignment:
Q  122 gaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaaccgtgaggatttatttggcaaacggaggaaaaattgagggaccaaaagat 221  Q
    ||||||| |||||||||||||||| |  ||||  || |||||||| ||||| ||  | |||||||||| |||| ||||||||| | |||||||||||| |    
T  2426 gaccacttttaaggttggtccaccatt-acatatttggagttaaagttaacagtcggaatttatttggaaaacagaggaaaaactaagggaccaaaaggt 2524  T
Q  222 acgtgttattaat 234  Q
    || | ||||||||    
T  2525 actttttattaat 2537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 22188 - 22099
Alignment:
Q  80 atcaaatggttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccgtagacatcatttgagttaaacttaa 171  Q
    ||||||||||| ||||||||  |||||||||| |||||||||||||||    || ||||||||||| ||| |||  |||| |||||||||||    
T  22188 atcaaatggtttaaattaaagaaattaatagggtctatggtggaccacctacaatgttggtccaccataggcat--tttgggttaaacttaa 22099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 515 - 585
Alignment:
Q  55 caacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||||| ||| |||||||| |||||||||||||||||| || | |||||| |||||| |||| ||||    
T  515 caacggttctcattt-aaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaacca 585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 759 - 689
Alignment:
Q  55 caacggttctccttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||||| ||| |||||||| |||||||||||||||||| || | |||||| |||||| |||| ||||    
T  759 caacggttctcattt-aaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaacca 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 18923 - 18868
Alignment:
Q  178 ggatttatttggcaaacggaggaaaaattgagggaccaaaagatacgtgttattaa 233  Q
    ||||||||||||||||||||| ||||| |||||||| |||| ||| || |||||||    
T  18923 ggatttatttggcaaacggagtaaaaagtgagggactaaaacataagttttattaa 18868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 207696 - 207729
Alignment:
Q  67 ttttaaagaaaagatcaaatggttaaaattaaaa 100  Q
    |||||||||||| |||||||||||||||||||||    
T  207696 ttttaaagaaaaaatcaaatggttaaaattaaaa 207729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 9379 - 9435
Alignment:
Q  70 taaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
    ||||||||| |||||||||||||||||| || | |||||| |||||| |||| ||||    
T  9379 taaagaaaaaatcaaatggttaaaattagaaaatttaataagatctacggtgaacca 9435  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 13101 - 13161
Alignment:
Q  66 cttttaaagaaaagatcaaatggttaaaattaaaataattaataggatctatggtggacca 126  Q
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T  13101 cttttaaagaaaaaatcaaatggttaagattaaaaattttagtagggtatatggtggacca 13161  T

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