View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10698_high_45 (Length: 207)
Name: NF10698_high_45
Description: NF10698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10698_high_45 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 24718611 - 24718438
Alignment:
| Q |
18 |
ggtggatatcagcaccatggttgaggagggtgcccagctcaatatgtaaaaattttacagcttccaattaaggtagaaacctgaggattctcgtttctct |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24718611 |
ggtggatatcagcaccatggttgaggagggtgcccagctcaatatgtaaaaattttacagcttccaattaaggtagaaacctgaggattctcgtttctct |
24718512 |
T |
|
| Q |
118 |
gcatttaaattttagctcagtgcaagaaaaaagttcaatactacacctttgcaaataaaattactgatcatttt |
191 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24718511 |
gcatttaaattttagctcaatgcaagaaaaaagttcaatactacacctttgcaaataaaattactgatcatttt |
24718438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University