View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10698_low_25 (Length: 298)

Name: NF10698_low_25
Description: NF10698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10698_low_25
NF10698_low_25
[»] chr7 (43 HSPs)
chr7 (11-296)||(26639176-26639455)
chr7 (80-234)||(3904706-3904861)
chr7 (80-235)||(36146496-36146652)
chr7 (80-235)||(12097947-12098102)
chr7 (89-235)||(48491513-48491659)
chr7 (115-233)||(1360243-1360361)
chr7 (76-235)||(41317522-41317681)
chr7 (115-235)||(5116564-5116684)
chr7 (89-235)||(47676224-47676370)
chr7 (88-233)||(4253619-4253765)
chr7 (79-227)||(8153266-8153414)
chr7 (89-235)||(27347751-27347897)
chr7 (89-235)||(31733057-31733203)
chr7 (89-235)||(47674031-47674177)
chr7 (89-235)||(1113591-1113737)
chr7 (76-210)||(18396235-18396373)
chr7 (76-187)||(30843369-30843480)
chr7 (89-235)||(48489365-48489511)
chr7 (89-229)||(4586095-4586235)
chr7 (89-235)||(23554974-23555120)
chr7 (111-235)||(30024820-30024945)
chr7 (169-235)||(43363562-43363628)
chr7 (89-235)||(26417250-26417396)
chr7 (89-235)||(41649099-41649244)
chr7 (89-235)||(43864178-43864324)
chr7 (99-227)||(2361068-2361196)
chr7 (99-235)||(6431915-6432051)
chr7 (260-296)||(4253566-4253602)
chr7 (89-235)||(14069921-14070067)
chr7 (89-235)||(14379949-14380095)
chr7 (89-235)||(35853849-35853994)
chr7 (89-227)||(38671318-38671456)
chr7 (89-186)||(2761439-2761536)
chr7 (161-235)||(22269978-22270053)
chr7 (126-230)||(45511127-45511234)
chr7 (88-149)||(24526071-24526132)
chr7 (99-165)||(40808533-40808599)
chr7 (77-149)||(5514183-5514256)
chr7 (10-43)||(9184964-9184997)
chr7 (88-227)||(31518728-31518867)
chr7 (175-235)||(2390302-2390362)
chr7 (11-43)||(2647488-2647520)
chr7 (260-296)||(25615947-25615983)
[»] scaffold0219 (2 HSPs)
scaffold0219 (76-227)||(27539-27691)
scaffold0219 (252-296)||(27480-27524)
[»] chr4 (58 HSPs)
chr4 (88-235)||(6677401-6677549)
chr4 (115-235)||(32091438-32091558)
chr4 (88-228)||(44967924-44968065)
chr4 (80-233)||(37229812-37229966)
chr4 (113-235)||(38811277-38811399)
chr4 (80-235)||(36463477-36463632)
chr4 (88-235)||(52467442-52467590)
chr4 (89-227)||(24969045-24969184)
chr4 (89-235)||(5429613-5429759)
chr4 (132-235)||(22882839-22882942)
chr4 (132-235)||(22934503-22934606)
chr4 (89-235)||(54199994-54200140)
chr4 (89-235)||(48142976-48143123)
chr4 (85-185)||(23042928-23043028)
chr4 (76-186)||(29056278-29056388)
chr4 (87-227)||(31474082-31474223)
chr4 (89-229)||(5871754-5871894)
chr4 (169-235)||(34788863-34788929)
chr4 (89-196)||(13009558-13009665)
chr4 (127-235)||(21703924-21704033)
chr4 (88-231)||(48142470-48142614)
chr4 (86-235)||(6542267-6542418)
chr4 (89-235)||(26175724-26175870)
chr4 (89-235)||(36994458-36994604)
chr4 (89-235)||(52095450-52095596)
chr4 (89-235)||(56178725-56178870)
chr4 (76-167)||(3739260-3739351)
chr4 (89-226)||(47038507-47038643)
chr4 (89-229)||(34570508-34570648)
chr4 (89-235)||(9927546-9927691)
chr4 (115-235)||(41961377-41961497)
chr4 (76-136)||(45687371-45687430)
chr4 (161-235)||(379385-379460)
chr4 (99-193)||(6766206-6766301)
chr4 (132-235)||(33089855-33089958)
chr4 (99-235)||(54882964-54883100)
chr4 (88-140)||(5208025-5208078)
chr4 (89-236)||(29254428-29254575)
chr4 (178-235)||(33989867-33989924)
chr4 (86-235)||(4587889-4588039)
chr4 (260-296)||(5871914-5871950)
chr4 (175-235)||(8665428-8665488)
chr4 (89-235)||(12739638-12739784)
chr4 (89-235)||(12747844-12747990)
chr4 (99-142)||(26699626-26699670)
chr4 (155-227)||(44570462-44570533)
chr4 (253-296)||(33089966-33090009)
chr4 (86-144)||(51336995-51337053)
chr4 (252-298)||(33989931-33989977)
chr4 (176-234)||(34112838-34112896)
chr4 (93-202)||(52065534-52065643)
chr4 (89-142)||(52082838-52082891)
chr4 (89-233)||(53345150-53345295)
chr4 (103-235)||(55085453-55085585)
chr4 (252-293)||(6677556-6677597)
chr4 (158-234)||(22628984-22629060)
chr4 (83-127)||(37782092-37782136)
chr4 (260-296)||(48893676-48893712)
[»] chr8 (48 HSPs)
chr8 (83-235)||(41266896-41267049)
chr8 (75-235)||(3231884-3232045)
chr8 (89-210)||(38863805-38863926)
chr8 (88-235)||(18141753-18141900)
chr8 (76-235)||(7597535-7597694)
chr8 (88-227)||(29796418-29796558)
chr8 (101-233)||(8965781-8965914)
chr8 (83-233)||(11712091-11712242)
chr8 (76-227)||(32902270-32902421)
chr8 (76-229)||(40321001-40321154)
chr8 (76-227)||(30291526-30291679)
chr8 (89-235)||(4731592-4731738)
chr8 (89-235)||(15212720-15212866)
chr8 (89-235)||(27811212-27811358)
chr8 (89-227)||(41364943-41365081)
chr8 (136-235)||(11137007-11137105)
chr8 (89-226)||(43036357-43036494)
chr8 (89-229)||(1345465-1345605)
chr8 (132-230)||(7444911-7445009)
chr8 (99-227)||(44353736-44353865)
chr8 (89-235)||(30143276-30143420)
chr8 (89-227)||(1292559-1292697)
chr8 (89-235)||(33352084-33352230)
chr8 (74-144)||(1872088-1872159)
chr8 (89-235)||(31218191-31218337)
chr8 (99-235)||(40221689-40221825)
chr8 (99-235)||(42435079-42435215)
chr8 (89-235)||(42498128-42498274)
chr8 (88-227)||(3303766-3303905)
chr8 (99-235)||(19491787-19491922)
chr8 (111-235)||(34254419-34254542)
chr8 (132-235)||(34256595-34256697)
chr8 (86-132)||(3318740-3318786)
chr8 (99-235)||(4283468-4283604)
chr8 (91-235)||(4743292-4743435)
chr8 (170-236)||(12702721-12702787)
chr8 (89-232)||(10929734-10929876)
chr8 (11-43)||(4696399-4696431)
chr8 (260-296)||(6599066-6599102)
chr8 (260-296)||(6674519-6674555)
chr8 (89-144)||(8153695-8153751)
chr8 (99-229)||(10930293-10930423)
chr8 (175-227)||(11384005-11384057)
chr8 (252-296)||(11712038-11712082)
chr8 (260-296)||(15212880-15212916)
chr8 (260-296)||(18141914-18141950)
chr8 (260-296)||(18655494-18655530)
chr8 (252-296)||(40321167-40321210)
[»] chr3 (53 HSPs)
chr3 (72-235)||(1313893-1314057)
chr3 (80-228)||(44700573-44700722)
chr3 (76-235)||(31314366-31314525)
chr3 (80-235)||(8166545-8166702)
chr3 (80-235)||(29196474-29196631)
chr3 (103-235)||(35138794-35138928)
chr3 (89-235)||(5236544-5236690)
chr3 (99-228)||(3148086-3148215)
chr3 (134-235)||(20937635-20937736)
chr3 (99-235)||(26323162-26323300)
chr3 (89-235)||(22835090-22835236)
chr3 (89-227)||(40734432-40734570)
chr3 (86-235)||(23391997-23392146)
chr3 (89-235)||(45095099-45095243)
chr3 (88-227)||(32891036-32891176)
chr3 (104-233)||(33191780-33191910)
chr3 (74-234)||(37761559-37761720)
chr3 (89-235)||(760781-760927)
chr3 (89-227)||(39153457-39153595)
chr3 (89-235)||(44331479-44331625)
chr3 (88-149)||(9666641-9666703)
chr3 (136-225)||(1683457-1683546)
chr3 (85-235)||(23200226-23200374)
chr3 (144-228)||(4055860-4055943)
chr3 (89-235)||(19683977-19684123)
chr3 (89-235)||(29682293-29682439)
chr3 (99-235)||(46860416-46860554)
chr3 (99-229)||(49199564-49199694)
chr3 (99-233)||(5433966-5434102)
chr3 (89-235)||(9581217-9581362)
chr3 (99-227)||(4569895-4570024)
chr3 (99-227)||(43403841-43403969)
chr3 (85-235)||(23198027-23198175)
chr3 (175-227)||(24635277-24635329)
chr3 (76-143)||(28253822-28253889)
chr3 (99-228)||(30236069-30236198)
chr3 (252-295)||(33191917-33191960)
chr3 (133-223)||(50432754-50432845)
chr3 (99-235)||(6095687-6095823)
chr3 (99-227)||(43401898-43402026)
chr3 (99-235)||(54593648-54593784)
chr3 (89-228)||(40735317-40735456)
chr3 (174-235)||(46173376-46173437)
chr3 (88-227)||(53921599-53921738)
chr3 (105-197)||(2020098-2020190)
chr3 (74-149)||(2075231-2075306)
chr3 (89-235)||(7762200-7762345)
chr3 (86-149)||(23410503-23410566)
chr3 (99-198)||(25173618-25173717)
chr3 (260-296)||(44700516-44700552)
chr3 (11-43)||(47649846-47649878)
chr3 (76-120)||(51352317-51352361)
chr3 (93-227)||(51398752-51398886)
[»] chr2 (38 HSPs)
chr2 (76-228)||(13121689-13121842)
chr2 (83-188)||(28671857-28671962)
chr2 (76-227)||(36773483-36773634)
chr2 (89-235)||(11151679-11151825)
chr2 (89-235)||(11690435-11690581)
chr2 (87-235)||(42019961-42020109)
chr2 (89-235)||(42362286-42362432)
chr2 (76-187)||(11049470-11049581)
chr2 (136-235)||(42261574-42261676)
chr2 (133-235)||(30218133-30218235)
chr2 (89-229)||(34139865-34140005)
chr2 (89-235)||(24885595-24885741)
chr2 (89-235)||(29867803-29867949)
chr2 (80-235)||(7815361-7815517)
chr2 (88-235)||(33162538-33162685)
chr2 (89-235)||(723832-723978)
chr2 (89-235)||(38312174-38312320)
chr2 (89-235)||(5723344-5723488)
chr2 (93-235)||(30833284-30833425)
chr2 (89-235)||(4503220-4503366)
chr2 (89-149)||(39284819-39284879)
chr2 (89-235)||(2334506-2334651)
chr2 (170-234)||(6595095-6595159)
chr2 (89-227)||(17057465-17057603)
chr2 (89-227)||(17085448-17085586)
chr2 (252-296)||(24398144-24398188)
chr2 (132-235)||(33648147-33648251)
chr2 (93-235)||(36318097-36318239)
chr2 (75-150)||(4561026-4561100)
chr2 (76-149)||(11067226-11067299)
chr2 (99-235)||(24397997-24398137)
chr2 (99-175)||(5700271-5700347)
chr2 (89-144)||(14202586-14202641)
chr2 (176-235)||(26353204-26353264)
chr2 (260-296)||(29867963-29867999)
chr2 (260-296)||(33162488-33162524)
chr2 (89-235)||(36205752-36205897)
chr2 (260-296)||(36773656-36773692)
[»] chr5 (32 HSPs)
chr5 (115-235)||(35616129-35616249)
chr5 (89-228)||(3325847-3325986)
chr5 (76-235)||(13695779-13695939)
chr5 (124-235)||(316731-316842)
chr5 (89-222)||(19806318-19806449)
chr5 (115-228)||(10054911-10055024)
chr5 (85-135)||(9049530-9049580)
chr5 (89-228)||(31182907-31183045)
chr5 (89-235)||(533703-533849)
chr5 (89-235)||(13488137-13488283)
chr5 (89-235)||(28750743-28750889)
chr5 (89-235)||(33831614-33831760)
chr5 (89-235)||(39468637-39468783)
chr5 (89-235)||(25412696-25412840)
chr5 (170-231)||(22097879-22097940)
chr5 (89-235)||(5887504-5887650)
chr5 (89-235)||(42428518-42428664)
chr5 (99-210)||(4160575-4160686)
chr5 (99-235)||(213409-213545)
chr5 (99-235)||(28278260-28278396)
chr5 (99-235)||(38746949-38747085)
chr5 (100-235)||(42426323-42426458)
chr5 (86-225)||(5007481-5007621)
chr5 (89-235)||(13239686-13239831)
chr5 (192-235)||(32609572-32609615)
chr5 (89-155)||(42926827-42926893)
chr5 (89-233)||(30182523-30182666)
chr5 (11-44)||(5007446-5007479)
chr5 (115-210)||(10700761-10700857)
chr5 (260-296)||(32636918-32636954)
chr5 (86-149)||(37439065-37439127)
chr5 (260-296)||(39468587-39468623)
[»] chr1 (49 HSPs)
chr1 (76-235)||(28265642-28265801)
chr1 (93-236)||(1050531-1050674)
chr1 (124-235)||(12318611-12318722)
chr1 (90-234)||(928065-928211)
chr1 (86-235)||(4552725-4552874)
chr1 (76-235)||(50167263-50167422)
chr1 (89-227)||(197004-197142)
chr1 (89-235)||(31659172-31659318)
chr1 (133-235)||(9109508-9109610)
chr1 (99-227)||(25652029-25652158)
chr1 (99-235)||(41135763-41135900)
chr1 (89-235)||(834255-834401)
chr1 (88-233)||(2263065-2263214)
chr1 (89-235)||(3847209-3847355)
chr1 (115-227)||(4535577-4535688)
chr1 (89-227)||(10925157-10925295)
chr1 (89-227)||(15820241-15820379)
chr1 (88-226)||(44650260-44650399)
chr1 (89-235)||(49918283-49918430)
chr1 (76-131)||(777164-777218)
chr1 (99-235)||(11348642-11348778)
chr1 (146-235)||(22079307-22079396)
chr1 (99-235)||(6808389-6808532)
chr1 (88-234)||(13138065-13138209)
chr1 (89-235)||(28220314-28220460)
chr1 (99-228)||(37879006-37879135)
chr1 (89-155)||(43342424-43342490)
chr1 (100-235)||(13547177-13547312)
chr1 (99-226)||(37033170-37033297)
chr1 (99-235)||(41360859-41360994)
chr1 (89-235)||(3156800-3156945)
chr1 (144-235)||(16914263-16914355)
chr1 (93-227)||(44455098-44455232)
chr1 (169-235)||(8871136-8871203)
chr1 (85-120)||(11031301-11031336)
chr1 (161-227)||(36683695-36683762)
chr1 (111-228)||(37503649-37503767)
chr1 (99-235)||(29136191-29136327)
chr1 (144-201)||(13938126-13938182)
chr1 (89-196)||(23555392-23555499)
chr1 (88-227)||(50169306-50169445)
chr1 (170-234)||(2926523-2926587)
chr1 (260-296)||(4552675-4552711)
chr1 (260-296)||(28265592-28265628)
chr1 (89-144)||(30476627-30476682)
chr1 (175-235)||(31925795-31925855)
chr1 (99-229)||(37168241-37168371)
chr1 (99-229)||(47115115-47115245)
chr1 (175-235)||(47255428-47255488)
[»] chr6 (18 HSPs)
chr6 (88-226)||(4045355-4045494)
chr6 (89-235)||(9183119-9183265)
chr6 (80-235)||(3038991-3039146)
chr6 (89-235)||(28137496-28137642)
chr6 (122-235)||(25073535-25073648)
chr6 (89-235)||(5406288-5406432)
chr6 (89-235)||(5410613-5410757)
chr6 (99-235)||(21593608-21593744)
chr6 (161-235)||(2973027-2973102)
chr6 (89-235)||(5413482-5413626)
chr6 (89-235)||(31404763-31404907)
chr6 (85-232)||(2171622-2171768)
chr6 (161-227)||(5043632-5043699)
chr6 (161-235)||(17758028-17758103)
chr6 (161-235)||(21588936-21589011)
chr6 (170-216)||(186729-186775)
chr6 (99-149)||(22615914-22615964)
chr6 (11-43)||(24435763-24435795)
[»] scaffold0002 (1 HSPs)
scaffold0002 (136-235)||(490409-490511)
[»] scaffold0053 (1 HSPs)
scaffold0053 (93-235)||(24990-25133)
[»] scaffold0197 (1 HSPs)
scaffold0197 (133-235)||(1483-1585)
[»] scaffold0129 (1 HSPs)
scaffold0129 (88-144)||(19118-19174)
[»] scaffold1519 (1 HSPs)
scaffold1519 (89-235)||(851-996)
[»] scaffold0016 (1 HSPs)
scaffold0016 (76-149)||(114524-114596)
[»] scaffold0066 (1 HSPs)
scaffold0066 (260-296)||(20453-20489)


Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 11 - 296
Target Start/End: Original strand, 26639176 - 26639455
Alignment:
Q  11 caaaggagataactttagggttgagtatctttgggttgagttgagaaacttaggaaataaaaggagttctcttgagaggttctcttgcgttgggaaacat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26639176 caaaggagataactttagggttgagtatctttgggttgagttgagaaacttaggaaataaaaggagttctcttgagcggttctcttgcgttgggaaacat 26639275  T
Q  111 ttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttga 210  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26639276 ttgtaaacactttaggtgagtaaaatcattgagtctcttctttttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttga 26639375  T
Q  211 tgttaatttcttgtaacccttttgtgnnnnnnnnnnnnncattgtaaataactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||||||||||    
T  26639376 tgttaatttcttgtaacccttttgt------atatatatcattgtaaataactctttgataatggattagagagatcaatctctcc 26639455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 3904861 - 3904706
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtag 179  Q
    ||||||||  |||||||| |||  ||||||||||||||||| ||||| |||| ||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  3904861 tcttgagacattctcttgagttaagaaacatttgtaaacaccttgggcgagtgaaatcattgagtctcttgttcttaggaagagattgggaaaatggtag 3904762  T
Q  180 aaattagg-tatgttcttggagagtttgttgatgttaatttcttgtaacccttttg 234  Q
    |||||||| | ||||||| |||||  | ||||   |||||||||||||| ||||||    
T  3904761 aaattaggttttgttctttgagagcctattgaatgtaatttcttgtaacacttttg 3904706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 36146652 - 36146496
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggt 177  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| |||    
T  36146652 tcttgagaggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggt 36146554  T
Q  178 agaaattag-gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||| || |||| || | ||| ||||||| | ||||||| |||||||| |||||    
T  36146553 agaaattagagtttgttatttgtgagcttgttgaagctaatttc-tgtaacccatttgt 36146496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 12098102 - 12097947
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggt 177  Q
    |||||||||||||||||| ||||||||||| |||||||||  |||||||||| ||||||||||||| |||| ||| | ||   |||||| |||||| |||    
T  12098102 tcttgagaggttctcttgggttgggaaaca-ttgtaaacatcttgggtgagtgaaaatcattgagtgtcttgttcattgg-ttagattgggaaaatgggt 12098005  T
Q  178 agaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||||  ||||| | | ||| ||||||| |||||||||||||||||| |||||    
T  12098004 agaaattagggttgttcattgtgagcttgttgaagttaatttcttgtaacccatttgt 12097947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 48491513 - 48491659
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  48491513 gttctcttgggttgggaaacatt-gtaaacactttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 48491610  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  48491611 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 48491659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 1360361 - 1360243
Alignment:
Q  115 aaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgtt 214  Q
    |||||| || ||||||| ||||||||||||||||| ||| ||| | ||||||| ||||| |||||||||||||| |  |||||||||  ||||||| |      
T  1360361 aaacacctttggtgagtgaaatcattgagtctcttgttcatggaatgagattgggaaaaaggtagaaattaggttttgtcttggagaacttgttgaagcg 1360262  T
Q  215 aatttcttgtaaccctttt 233  Q
    |||||||||||||||||||    
T  1360261 aatttcttgtaaccctttt 1360243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 41317681 - 41317522
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa- 173  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||| |||| ||||| |||||||||||||||||| ||| | ||  ||||||| |||||     
T  41317681 gttctcttgaggggttctcttgggttgggaaaca-ttgtaaacaccttggatgagtgaaaatcattgagtctcttgttcattgg-tgagattgggaaaat 41317584  T
Q  174 tggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||||||||  ||||||| | ||| ||||  | | ||||||||||||| || |||||    
T  41317583 tggtagaaattagggttgttctttgtgagcttgtcaaagctaatttcttgtaatccatttgt 41317522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 5116564 - 5116684
Alignment:
Q  115 aaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgtt 214  Q
    |||||| ||||| | || ||||||||||||||||| ||  ||||| ||||||  |||||  ||||||||||||| |||||||||| |||||||||| | |    
T  5116564 aaacacattgggcgggtgaaatcattgagtctcttgtttatgggaggagattaggaaaagagtagaaattaggtttgttcttggatagtttgttgaagat 5116663  T
Q  215 aatttcttgtaacccttttgt 235  Q
    ||||| |||||| ||||||||    
T  5116664 aatttattgtaaaccttttgt 5116684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 47676370 - 47676224
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||| ||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  47676370 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcaatgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattag 47676273  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | || |||||||| | |||||||||||||||| |||||    
T  47676272 ggttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgt 47676224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 233
Target Start/End: Complemental strand, 4253765 - 4253619
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaatta- 185  Q
    |||||||||| ||||| |||||||||||||||| || ||||||| ||||||||||||| |||| ||| | ||  || ||||  ||||||||||||||||     
T  4253765 ggttctcttgggttggaaaacatttgtaaacaccttaggtgagtgaaaatcattgagtttcttgttcattgg-tgaaattggtaaaatggtagaaattag 4253667  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaaccctttt 233  Q
    ||| ||||||| | ||| ||||||| | ||||||| ||||||||||||    
T  4253666 ggtttgttctttgtgagcttgttgaagctaatttcatgtaaccctttt 4253619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 8153266 - 8153414
Alignment:
Q  79 ctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatg-g 176  Q
    |||||||| |||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| ||||||| |    
T  8153266 ctcttgaggggttctcttgggttgggaaaca-ttgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgag 8153363  T
Q  177 tagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |||||||||||  ||||||| | ||| ||||  | | ||||||||||||||    
T  8153364 tagaaattagggttgttctttgtgagattgtcaaagctaatttcttgtaac 8153414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 27347751 - 27347897
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||  ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  27347751 gttctcttaggttgggaaacatt-gtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 27347848  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  27347849 gattgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 27347897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 31733203 - 31733057
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||| || |||||||| ||||||||||    
T  31733203 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagactgagaaaatgggtagaaattag 31733106  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| ||| ||| | |||||||||||||||| |||||    
T  31733105 ggttgttctttgtgagcttggtgaagctaatttcttgtaacccatttgt 31733057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 47674177 - 47674031
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||| ||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  47674177 gttctcttgggttggaaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattag 47674080  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  47674079 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 47674031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 1113591 - 1113737
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||  |||||||||| ||||||||||||| |||| ||| |  |  ||||||| |||||||| ||||||||||    
T  1113591 gttctcttgggttgggaaaca-ttgtaaacaacttgggtgagtgaaaatcattgagtgtcttgttcatttg-tgagattgagaaaatggatagaaattag 1113688  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| ||||||| | ||||||||| |||||| |||||    
T  1113689 ggttgttctttgtgagcttgttgaagctaatttcttataacccatttgt 1113737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 18396235 - 18396373
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattg---tgaaa 172  Q
    ||||| ||||| |||||| ||| |||  ||||||||||||||||| |||||||||| ||||  |||||||  || |||||| ||||||||||     |||    
T  18396235 gttctattgagtggttcttttgagttatgaaacatttgtaaacaccttgggtgagtgaaattgttgagtccattgttcttgagaagagattggaaaaaaa 18396334  T
Q  173 atggtagaaattagg-tatgttcttggagagtttgttga 210  Q
    |  |||||||||||| | |||||||||||||||||||||    
T  18396335 aaagtagaaattaggttttgttcttggagagtttgttga 18396373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 30843480 - 30843369
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgag-taaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||| || | |||| |||||||||||||| |||| ||| | || |||||||| | |||     
T  30843480 gttctcttgaaaggttctcttgggttgagaaacatttgtaaacaccttagatgagttaaaatcattgagtatcttgttcattgg-agagattgagtaaaa 30843382  T
Q  175 ggtagaaattagg 187  Q
    |||| ||||||||    
T  30843381 ggtataaattagg 30843369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 48489365 - 48489511
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||| | | |||| ||| | ||  ||||||| |||||| ||||||||||||    
T  48489365 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattaaatgtcttgttcattgg-tgagattgggaaaatgggtagaaattag 48489462  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| || |  ||||||| | |||||||||||||||| |||||    
T  48489463 ggttgttctttgaaaacttgttgaagctaatttcttgtaacccatttgt 48489511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 229
Target Start/End: Original strand, 4586095 - 4586235
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||  |||||||||||| |||| ||| | ||  ||||||| |||||| ||||||||||||    
T  4586095 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgtaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaattag 4586192  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaaccc 229  Q
    |  ||||||| | ||  ||||||| | |||||| |||||||||    
T  4586193 ggttgttctttgtgaacttgttgaagctaattttttgtaaccc 4586235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 23554974 - 23555120
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtg--aaaatggtagaaatta 185  Q
    ||||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||| |||| ||| | ||  ||||||| |  ||||||||||||||||    
T  23554974 gttctcttgagttgggaaaca-ttgtaaacacctt-ggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaaaatggtagaaatta 23555070  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||  ||||||| | ||  ||||||| | |||||||||||||| |||||||    
T  23555071 gggttgttctttgtgaacttgttgaagctaatttcttgtaacacttttgt 23555120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 30024945 - 30024820
Alignment:
Q  111 ttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttcttggagagtttgtt 208  Q
    |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| |||||||||||  ||||| | | ||| |||||    
T  30024945 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttcattgtgagcttgtt 30024847  T
Q  209 gatgttaatttcttgtaacccttttgt 235  Q
    || | |||||||||||||||| |||||    
T  30024846 gaagctaatttcttgtaacccatttgt 30024820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 43363628 - 43363562
Alignment:
Q  169 gaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||||||||||||||||| ||||||||||||| |||||||   |||||| ||||||| |||||||    
T  43363628 gaaaatggtagaaattaggtttgttcttggagagcttgttgaaactaatttattgtaactcttttgt 43363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 26417250 - 26417396
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    |||||||||  |||||||||||| |||||||| ||| | | || ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  26417250 gttctcttggattgggaaacatt-gtaaacaccttgagcgggtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 26417347  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  26417348 ggttgttctttgtgagcttgttgaagataatttcttgtaacccatttgt 26417396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 41649244 - 41649099
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa-tggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||| ||| ||||||||||||| |||| ||| |  |  |||||||  |||| |||||||||||||    
T  41649244 gttctcttgggttgggaaaca-ttgtaaacaccttgggtaagtgaaaatcattgagtgtcttgttcatttg-tgagattggaaaaattggtagaaattag 41649147  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  41649146 gtttgttctttgtgagcttgttta-gctaatttcttgtaacccatttgt 41649099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 43864178 - 43864324
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||| | ||||||||||||    
T  43864178 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattggaaaagtgggtagaaattag 43864275  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | ||||||| |||||||| |||||    
T  43864276 ggttgttctttgtgaacttgttgaagctaatttcctgtaacccatttgt 43864324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 2361196 - 2361068
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||||||    
T  2361196 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctt 2361099  T
Q  197 ggagagtttgttgatgttaatttcttgtaac 227  Q
     | ||| ||||||| | ||||||||||||||    
T  2361098 tgtgagcttgttgaagctaatttcttgtaac 2361068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 6431915 - 6432051
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||   |||||| |||||||| |||||||||||  |||||||    
T  6431915 gttgggaaacaattgtaaacacattgggagagtgaaaatcat-gagtgtcttgttcattggtt-agattgggaaaatgggtagaaattaggattgttctt 6432012  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||||||||||||| |||||    
T  6432013 tgtgagcttgttgaagctaatttcttgtaacccatttgt 6432051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 4253602 - 4253566
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    ||||| |||||||||||||||||||||||||||||||    
T  4253602 aactcattgataatggattagagagatcaatctctcc 4253566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 14070067 - 14069921
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| |||||| |||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| || ||||||||||    
T  14070067 gttctcttgggttgggtaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattag 14069970  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||  | | |||||||||||||||| |||||    
T  14069969 ggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgt 14069921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 14380095 - 14379949
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| |||||| |||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| || ||||||||||    
T  14380095 gttctcttgggttgggtaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattag 14379998  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||  | | |||||||||||||||| |||||    
T  14379997 ggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgt 14379949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 35853849 - 35853994
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| || ||||||||||    
T  35853849 gttctcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattag 35853945  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  35853946 ggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 35853994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 227
Target Start/End: Complemental strand, 38671456 - 38671318
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgag-taaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||| |||| ||| |  |  ||||||| |||||| ||||||||||||    
T  38671456 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagcgaaaatcattgagtgtcttgttcatttg-tgagattgggaaaatgggtagaaattag 38671359  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |  ||||||| | ||| ||||| | | |||||| |||||||    
T  38671358 ggttgttctttgtgagcttgtttaagctaatttattgtaac 38671318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 2761536 - 2761439
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa-tggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| |||||||| |||| |||| ||| | ||  ||||||| ||||| |||||||||||||    
T  2761536 gttctcttgggttgggaaaca-ttgtaaacacattgggtgagtgaaaatcatcgagtgtcttgttcattgg-tgagattgggaaaattggtagaaattag 2761439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 22269978 - 22270053
Alignment:
Q  161 gagattgtgaaaatgg-tagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||| |||||||| |||||||||||  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  22269978 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 22270053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 45511127 - 45511234
Alignment:
Q  126 gtgagtaaaatcattgagtctcttcttcttgggaagagattgtg-aaaatggtagaaattag-gtatgttcttggagagtttgttg-atgttaatttctt 222  Q
    ||||||||||||||| ||| ||||  |   |||||||||||  | ||||||||| ||||||| || ||||||| |||||||||||| |||| ||||||||    
T  45511127 gtgagtaaaatcatttagtatcttgataaagggaagagattaagcaaaatggtacaaattagtgtttgttcttagagagtttgttgaatgtaaatttctt 45511226  T
Q  223 gtaaccct 230  Q
    ||||||||    
T  45511227 gtaaccct 45511234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 24526132 - 24526071
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctctt 149  Q
    |||||||||  ||||||||||| |||||||||| |||||||||| ||||||||||||| ||||    
T  24526132 ggttctcttaggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtctt 24526071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 40808533 - 40808599
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagat 165  Q
    |||||||| ||||||| ||||| |||||| ||| ||||||||| | ||||| ||| |||||||||||    
T  40808533 gttgggaaccatttgtgaacaccttgggttagtgaaatcattgcgcctcttgttcatgggaagagat 40808599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 5514256 - 5514183
Alignment:
Q  77 ttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctctt 149  Q
    ||||||| |||  |||||||| ||||||||||| |||||||||| || | ||||| ||||||||||||| ||||    
T  5514256 ttctcttaagaaattctcttgggttgggaaacacttgtaaacaccttcgatgagtgaaaatcattgagtttctt 5514183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 9184964 - 9184997
Alignment:
Q  10 gcaaaggagataactttagggttgagtatctttg 43  Q
    ||||||||| ||||||||||||||||||||||||    
T  9184964 gcaaaggaggtaactttagggttgagtatctttg 9184997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 227
Target Start/End: Original strand, 31518728 - 31518867
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaatta 185  Q
    |||||| ||| ||||| ||||||  |||||||| |||||||||| |||||||| |||| |||| ||| | ||  ||||||| |||||| |||||||||||    
T  31518728 ggttcttttgggttggaaaacatc-gtaaacaccttgggtgagtgaaaatcatcgagtgtcttgttcattggt-gagattgggaaaataggtagaaatta 31518825  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    ||| ||||||| | ||| || |||| | || |||||||||||    
T  31518826 ggtttgttctttgtgagcttattgaagctagtttcttgtaac 31518867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 2390302 - 2390362
Alignment:
Q  175 ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||||||||||  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  2390302 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 2390362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 2647488 - 2647520
Alignment:
Q  11 caaaggagataactttagggttgagtatctttg 43  Q
    |||||||||||||||||||||||||| ||||||    
T  2647488 caaaggagataactttagggttgagtgtctttg 2647520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 25615947 - 25615983
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  25615947 aactcattgatagtggattagagagatcaatctctcc 25615983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 27691 - 27539
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatg 175  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||| ||||||||||| |||| ||||||||||||||||||      
T  27691 gttcacttgagaggttctcttgagttgggaaacatttgtaaacaccttggatgagtgaaatctttgagtctcttgttctagggaagagattgtgaaaaga 27592  T
Q  176 gtagaaattaggta-tgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |||||||||| ||| |||||||| |||| ||||||| | ||||||||||||||    
T  27591 gtagaaattatgtattgttcttgaagagcttgttgaagctaatttcttgtaac 27539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 27524 - 27480
Alignment:
Q  252 ttgtaaataactctttgataatggattagagagatcaatctctcc 296  Q
    ||||||||||||  |||||| |||||| |||||||||||||||||    
T  27524 ttgtaaataacttattgatagtggattggagagatcaatctctcc 27480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 6677401 - 6677549
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    |||||||||| |||||||||||||||||||||| |||| ||||| |||| |||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  6677401 ggttctcttgggttgggaaacatttgtaaacacattggatgagtgaaataattgagtctcttgttcttgggaagaaattg-gaaaatggtagaaattagg 6677499  T
Q  188 --tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
      | | ||||||||||| ||||||| | ||||||||||||||||||||||    
T  6677500 ttttttttcttggagagcttgttgaagctaatttcttgtaacccttttgt 6677549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 32091438 - 32091558
Alignment:
Q  115 aaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgtt 214  Q
    |||||| |||||||||  ||||||||||||||||| ||| |||||  |||||| ||||||| |||||||||||| |||||||||||||||||||||   |    
T  32091438 aaacacattgggtgagcgaaatcattgagtctcttgttcatgggagaagattgggaaaatgctagaaattaggtttgttcttggagagtttgttgaaact 32091537  T
Q  215 aatttcttgtaacccttttgt 235  Q
    ||||||||||||| |||||||    
T  32091538 aatttcttgtaactcttttgt 32091558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 88 - 228
Target Start/End: Complemental strand, 44968065 - 44967924
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||||||  || |||||||||||||||||  |||| ||||| ||||||||||| || || ||||||||||||||||| |||||||||||||||||||    
T  44968065 ggttctcttggatttggaaacatttgtaaacaaattggttgagtgaaatcattgagcctgttgttcttgggaagagattgggaaaatggtagaaattagg 44967966  T
Q  188 -tatgttcttggagagtttgttgatgttaatttcttgtaacc 228  Q
     | || |||||||||| ||| ||| |  ||||||||||||||    
T  44967965 ttttgctcttggagagcttgctgaagccaatttcttgtaacc 44967924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 37229966 - 37229812
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggta 178  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||| ||||| |||| ||| | ||  ||||||| ||||||||||    
T  37229966 tcttgagaggttctcttgggttggaaaacatttgtaaacaccttgggtgagtgaaaatcaatgagtgtcttgttcattgg-tgagattgggaaaatggta 37229868  T
Q  179 gaaatta-ggtatgttcttggagagtttgttgatgttaatttcttgtaaccctttt 233  Q
    ||||||| ||| ||||||| | ||| ||||| | |  ||||| |||||||||||||    
T  37229867 gaaattagggtgtgttctttgtgagcttgttaaagcaaatttgttgtaaccctttt 37229812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 38811399 - 38811277
Alignment:
Q  113 gtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatg 212  Q
    |||||||| |||||||||| ||||||||||||||||| ||| | | ||||||||| ||||  |||| |||||| || |||||||||||||||||||||      
T  38811399 gtaaacaccttgggtgagtgaaatcattgagtctcttgttcatagaaagagattgagaaatgggtacaaattaagtttgttcttggagagtttgttgaat 38811300  T
Q  213 ttaatttcttgtaacccttttgt 235  Q
    ||||||||| || ||| ||||||    
T  38811299 ttaatttctagtgaccattttgt 38811277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 36463632 - 36463477
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-t 177  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||| ||||||||| |||| ||| | ||  ||||||| |||||||| |    
T  36463632 tcttgagaggttctcttgagttgggaaaca-ttgtaaacaccttgggtgagtgaaattcattgagtgtcttgttcattgg-tgagattgggaaaatggat 36463535  T
Q  178 agaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||||  ||||| | | ||| ||||||| | |||||||||||||||| |||||    
T  36463534 agaaattagggctgttcattgtgagcttgttgaagctaatttcttgtaacccatttgt 36463477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 52467590 - 52467442
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaatta 185  Q
    |||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||| |  |  ||| ||| |||||| |||||||||||    
T  52467590 ggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttg-tgaggttgggaaaatgggtagaaatta 52467492  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||| ||||||| | ||| ||||||| | |||| ||||||||||| |||||    
T  52467491 ggtttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgt 52467442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 24969045 - 24969184
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||  |||| ||||| ||  |||||||  ||||| ||||||||||||    
T  24969045 gttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagagtcttgttctttgg-tgagattggaaaaatgggtagaaattag 24969143  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
     | ||||||| | ||| ||||||| | ||||||||||||||    
T  24969144 atttgttctttgtgagcttgttgaagctaatttcttgtaac 24969184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 5429613 - 5429759
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatg-gtagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| ||||||| |||||||||||    
T  5429613 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgagtagaaattag 5429710  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  | ||||| | ||| ||||||| | |||||||||||||||| |||||    
T  5429711 ggttattcttcgtgagcttgttgaagctaatttcttgtaacccatttgt 5429759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 22882942 - 22882839
Alignment:
Q  132 aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaaccct 230  Q
    |||||||||||||  ||| ||| ||| |||||||||  ||||||| || ||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  22882942 aaaatcattgagtgccttgttcatggaaagagattga-aaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttgtaaccct 22882844  T
Q  231 tttgt 235  Q
    |||||    
T  22882843 tttgt 22882839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 22934606 - 22934503
Alignment:
Q  132 aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaaccct 230  Q
    |||||||||||||  ||| ||| ||| |||||||||  ||||||| || ||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  22934606 aaaatcattgagtgccttgttcatggaaagagattga-aaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttgtaaccct 22934508  T
Q  231 tttgt 235  Q
    |||||    
T  22934507 tttgt 22934503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 54200140 - 54199994
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  54200140 gttctcttgggttgggaaacatt-gtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 54200043  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  54200042 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 54199994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 48142976 - 48143123
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtg--aaaatggtagaaatta 185  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |  |||| |||||||||||    
T  48142976 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaaaaaggtagaaatta 48143073  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||  ||||||| | ||  ||||||| | ||||||||||||||||||||||    
T  48143074 gggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgt 48143123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 23043028 - 23042928
Alignment:
Q  85 agaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaatt 184  Q
    ||||||||||||   ||||||||||||||||||||| |||| ||| | |||||||||| |||||| || ||||||||||||||   |||| |||||||||    
T  23043028 agaggttctcttagattgggaaacatttgtaaacaccttggatgaatgaaatcattgaatctcttgtttttgggaagagattggacaaatagtagaaatt 23042929  T
Q  185 a 185  Q
    |    
T  23042928 a 23042928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 29056278 - 29056388
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    ||||||||||||| || ||||| ||||||||||||||| |||||| |||||||||| ||||||||||||| | || ||| |  | |||||||| ||||||    
T  29056278 gttctcttgagagattatcttgtgttgggaaacatttggaaacaccttgggtgagtaaaaatcattgagtgttttgttcattag-agagattgggaaaat 29056376  T
Q  175 ggtagaaattag 186  Q
    ||||| ||||||    
T  29056377 ggtaggaattag 29056388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 31474082 - 31474223
Alignment:
Q  87 aggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaatt 184  Q
    |||||||||||   ||||||||||| ||||||||||||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| ||||||||||    
T  31474082 aggttctcttggagtgggaaacatt-gtaaacactttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgagaaaatgggtagaaatt 31474179  T
Q  185 aggt-atgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    ||||  |||||||   ||||||||||| | ||||||||||||||    
T  31474180 aggtcttgttctttttgagtttgttgaagctaatttcttgtaac 31474223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 229
Target Start/End: Original strand, 5871754 - 5871894
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||||||| ||||||||||    
T  5871754 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattag 5871851  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaaccc 229  Q
    || ||||||| | ||| ||||| | |  |||||||||||||||    
T  5871852 gtttgttctttgtgagcttgtttaagcaaatttcttgtaaccc 5871894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 34788929 - 34788863
Alignment:
Q  169 gaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||||||||||||||||  || |||||||||| ||||||| |||||||||||||||| |||||||    
T  34788929 gaaaatggtagaaattaggattgctcttggagagcttgttgaagttaatttcttgtaactcttttgt 34788863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 13009665 - 13009558
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| |  |  |||||||||||||| ||||||||||||    
T  13009665 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttg-tgagattgtgaaaatgggtagaaattag 13009568  T
Q  187 gtatgttctt 196  Q
    || |||||||    
T  13009567 gtttgttctt 13009558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 21704033 - 21703924
Alignment:
Q  127 tgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg-tatgttcttggagagtttgttgatgttaatttcttgta 225  Q
    ||||| |||||||| ||||| || ||||||||||||||||| ||||| ||||||||||||| | ||||||| || || ||||||| | | ||||||||||    
T  21704033 tgagtgaaatcattaagtctattgttcttgggaagagattgagaaaaaggtagaaattaggttttgttcttagaaagcttgttgaagatgatttcttgta 21703934  T
Q  226 acccttttgt 235  Q
     || ||||||    
T  21703933 ccctttttgt 21703924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 48142614 - 48142470
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaatta- 185  Q
    |||||||||| |||||||||||||| ||||||||| |||||||| ||||||||||||| ||||   | |  || ||||||| ||| ||| |||||||||     
T  48142614 ggttctcttgagttgggaaacatttttaaacacttcgggtgagtgaaaatcattgagtgtcttgcccat-tgatgagattgggaacatgatagaaattag 48142516  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaaccctt 231  Q
    ||| ||||||| | ||| ||||||| | || |||||||||||||||    
T  48142515 ggtttgttctttgtgagcttgttgaagctagtttcttgtaaccctt 48142470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 6542418 - 6542267
Alignment:
Q  86 gaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttc-ttgggaagagattgtg--aaaatggtagaa 181  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||| ||||| ||||||| |||| ||| |||||  ||||||| |  ||||||||||||    
T  6542418 gaggttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaattattgagtgtcttgttcattggg--gagattgggaaaaaatggtagaa 6542322  T
Q  182 attagg-tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||| | ||||||| | ||| |||||||   ||||||||||| | ||||||||    
T  6542321 attaggatttgttctttgtgagcttgttgaaactaatttcttgttagccttttgt 6542267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 26175870 - 26175724
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggt-agaaattag 186  Q
    ||||| ||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| ||||||||  |||||||||    
T  26175870 gttctgttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatggggagaaattag 26175773  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| |||||||   |||||||||||||||| |||||    
T  26175772 ggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgt 26175724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 36994458 - 36994604
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    |||||||||  |||| ||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| |||||||||     
T  36994458 gttctcttgatttggcaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaa 36994555  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  36994556 ggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 36994604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 52095596 - 52095450
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| ||||||||||||    
T  52095596 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaattag 52095499  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||  | | |||||||||||||||| |||||    
T  52095498 ggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgt 52095450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 56178870 - 56178725
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| || ||||||||||    
T  56178870 gttctcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattag 56178774  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | ||||||||||||||||||||||    
T  56178773 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgt 56178725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 3739351 - 3739260
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattg 167  Q
    |||||||||||||||||| ||| |||| |||||| |||||||| | |||| ||  ||||||||||||||||||  ||||| | |||||||||    
T  3739351 gttctcttgagaggttcttttgggttgagaaacagttgtaaacgcattggatgtataaaatcattgagtctctgtttctttgaaagagattg 3739260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 47038643 - 47038507
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| |||||||||||||  ||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  47038643 gttctcttgggttgggaaacatta-taaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattg-gaaaatgggtagaaattag 47038547  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaa 226  Q
    |  ||||||| | ||| ||||||| | |||||||||||||    
T  47038546 ggttgttctttgtgagcttgttgaagctaatttcttgtaa 47038507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 229
Target Start/End: Complemental strand, 34570648 - 34570508
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||||| | |||||  |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| ||||||||||||    
T  34570648 gttctcttgggttgggaaacatt-gaaaacatcttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaataggtagaaattag 34570551  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaaccc 229  Q
    |  ||||||| | ||  ||||||| | ||||||||||||||||    
T  34570550 ggttgttctttgtgaacttgttgaagctaatttcttgtaaccc 34570508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 9927691 - 9927546
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||| ||||||| ||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  9927691 gttctcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcactgagtgtcttattcattggt-gagattgggaaaatgggtagaaattag 9927595  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  9927594 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 9927546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 41961377 - 41961497
Alignment:
Q  115 aaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgtt 214  Q
    |||||| |||| ||| | ||||||||||||||||| ||| || ||||||||||  ||||  |||||||||| || ||||| ||||||| ||| |  || |    
T  41961377 aaacaccttggctgattgaaatcattgagtctcttgttcatgagaagagattggaaaaagagtagaaattaagtttgttcatggagagcttggtagtgct 41961476  T
Q  215 aatttcttgtaacccttttgt 235  Q
    |||||||||||| | ||||||    
T  41961477 aatttcttgtaatcattttgt 41961497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 45687430 - 45687371
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaat 136  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||| ||||    
T  45687430 gttctcttgaggggttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaat 45687371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 379385 - 379460
Alignment:
Q  161 gagattgtgaaaatgg-tagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||| |||||||| |||||||||||| ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  379385 gagattgagaaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 379460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 6766301 - 6766206
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagatt-gtgaaaatggtagaaattaggtatgtt 193  Q
    |||| |||||| || |||||||||||||||||| |||||||||||||||||  ||  ||| ||||||| | ||||| | |||||||||||| ||||    
T  6766301 gttgtgaaacaattctaaacactttgggtgagtgaaatcattgagtctcttggtcacgggtagagattcgggaaaaagatagaaattaggtttgtt 6766206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 33089855 - 33089958
Alignment:
Q  132 aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaaccctt 231  Q
    ||||||||||||| |||| ||| ||||||||||||| || |    ||||||||| || ||||||||||||| ||||||| | |||||| || ||||| ||    
T  33089855 aaaatcattgagtgtcttgttcatgggaagagattgagagatgaatagaaattatgtttgttcttggagagcttgttgaagctaatttattataaccatt 33089954  T
Q  232 ttgt 235  Q
    ||||    
T  33089955 ttgt 33089958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 54882964 - 54883100
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||| ||    
T  54882964 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttttt 54883061  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||||||||||||| |||||    
T  54883062 tgtgagcttgttgaagctaatttcttgtaacccatttgt 54883100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 5208078 - 5208025
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcatt 140  Q
    ||||||||||  ||||||||||||||||||||| |||||||||| |||||||||    
T  5208078 ggttctcttggattgggaaacatttgtaaacaccttgggtgagtgaaaatcatt 5208025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 236
Target Start/End: Original strand, 29254428 - 29254575
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||| ||| | ||  ||||||| |||| | ||||||||||||    
T  29254428 gttctcttgggttgggaaaca-ttgtaaacacattgggtgaatgaaaatcattgagtgtcttgttcattgg-tgagattgggaaattgggtagaaattag 29254525  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgtg 236  Q
       |||| ||   ||| ||||||| |||||||||||| ||||| ||||||    
T  29254526 agttgttttttatgagcttgttgaagttaatttcttgcaacccatttgtg 29254575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 33989867 - 33989924
Alignment:
Q  178 agaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||| ||||| ||||||| ||||||||||||| | ||||||||||||| ||||||||    
T  33989867 agaaactaggtttgttcttagagagtttgttgaagctaatttcttgtaatccttttgt 33989924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 4587889 - 4588039
Alignment:
Q  86 gaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtg-aaaatggtagaaat 183  Q
    ||||||||| || ||||||||||| |||||||||| |||||||||| ||||||||||||| || | ||| | ||  || |||| | |||| |||||||||    
T  4587889 gaggttctcatgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcatgttcattgg-tgaaattgggaaaaaaggtagaaat 4587986  T
Q  184 t-aggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | || | ||||||| |  || ||||||| | ||||||||||||||||||||||    
T  4587987 taagatttgttctttgtaagcttgttgaagctaatttcttgtaacccttttgt 4588039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 5871914 - 5871950
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||| ||||||||||||||||||||||||    
T  5871914 aactctttgatagtggattagagagatcaatctctcc 5871950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 8665428 - 8665488
Alignment:
Q  175 ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||||||||||  ||||||| ||||| ||||||| | |||||||||||||||| |||||    
T  8665428 ggtagaaattagggttgttctttgagagcttgttgaagctaatttcttgtaacccatttgt 8665488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 12739784 - 12739638
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| || |||||||  |||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  12739784 gttctcttgggttgggaaaca-ttgtaaacaccttaggtgagtggaaatcattgagtgtcttgttcattgg-tgagattgggaaaatggatagaaattag 12739687  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||  | | |||||||||||||||| |||||    
T  12739686 ggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgt 12739638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 12747990 - 12747844
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| || |||||||  |||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  12747990 gttctcttgggttgggaaaca-ttgtaaacaccttaggtgagtggaaatcattgagtgtcttgttcattgg-tgagattgggaaaatggatagaaattag 12747893  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||  | | |||||||||||||||| |||||    
T  12747892 ggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgt 12747844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 26699670 - 26699626
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattga 142  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||    
T  26699670 gttgggaaacaattgtaaacactttgggtgagtgaaaatcattga 26699626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 44570533 - 44570462
Alignment:
Q  155 tgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |||||||||||||  |||||||||||||||| || |||| |||||||| |||||||   ||||||||||||||    
T  44570533 tgggaagagattga-aaaatggtagaaattatgtttgttgttggagagcttgttgaaactaatttcttgtaac 44570462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 33089966 - 33090009
Alignment:
Q  253 tgtaaataactctttgataatggattagagagatcaatctctcc 296  Q
    |||||| ||||| |||||| ||||||||||||||||||||||||    
T  33089966 tgtaaagaactcattgatagtggattagagagatcaatctctcc 33090009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 51336995 - 51337053
Alignment:
Q  86 gaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagt 144  Q
    |||||||||||| ||||| ||||| |||||||||| |||||||||| |||||||||||||    
T  51336995 gaggttctcttgggttggaaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagt 51337053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 33989931 - 33989977
Alignment:
Q  252 ttgtaaataactctttgataatggattagagagatcaatctctccac 298  Q
    ||||||||||||| || ||| |||||| |||||||||||||||||||    
T  33989931 ttgtaaataactcgttaatagtggattggagagatcaatctctccac 33989977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 34112838 - 34112896
Alignment:
Q  176 gtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttg 234  Q
    |||||||||| || |||||| |||||| ||||||| | ||||||| |||||||||||||    
T  34112838 gtagaaattatgtttgttctaggagagcttgttgaagctaatttcatgtaacccttttg 34112896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 52065534 - 52065643
Alignment:
Q  93 tcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatg 191  Q
    ||||| ||||||||||| |||| ||| | |||||||||| |||||||| |||||||||  ||   |||||| |||| ||||  |||||||||||||| ||    
T  52065534 tcttgggttgggaaacaattgtgaaccccttgggtgagtgaaaatcatcgagtctcttgatcaacggaagatattgggaaacaggtagaaattaggt-tg 52065632  T
Q  192 ttcttggagag 202  Q
    ||||| |||||    
T  52065633 ttcttagagag 52065643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 52082891 - 52082838
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattga 142  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||    
T  52082891 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattga 52082838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 233
Target Start/End: Original strand, 53345150 - 53345295
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||||| | || |||| |||||| ||||||||  |||||| ||||||||||||| |||| ||  | ||| ||||||| ||||||| ||||||||| |    
T  53345150 gttctcttggggtgagaaaaatttgttaacactttaagtgagtgaaaatcattgagtgtcttgtttatcgga-gagattgagaaaatgatagaaattaag 53345248  T
Q  188 tatg-ttcttggagagtttgttgatgttaatttcttgtaaccctttt 233  Q
      || ||||| | ||| |||||||   ||||||||||||||||||||    
T  53345249 gttgattctttgtgagcttgttgaaactaatttcttgtaaccctttt 53345295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 55085585 - 55085453
Alignment:
Q  103 ggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattaggtatgttcttggag 200  Q
    ||||||| |||||||||| |||||||||| ||||||||||| | |||| ||| | ||  ||||||| |||||| ||||||||||| |  ||||||| | |    
T  55085585 ggaaacaattgtaaacaccttgggtgagtgaaaatcattgactgtcttgttcattggt-gagattg-gaaaataggtagaaattaaggttgttctttgtg 55085488  T
Q  201 agtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||||||||||||| || |||||    
T  55085487 agcttgttgaagctaatttcttgtaaaccatttgt 55085453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 6677556 - 6677597
Alignment:
Q  252 ttgtaaataactctttgataatggattagagagatcaatctc 293  Q
    ||||||| || |||||||||||||||| ||||||||||||||    
T  6677556 ttgtaaagaagtctttgataatggatttgagagatcaatctc 6677597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 22629060 - 22628984
Alignment:
Q  158 gaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttg 234  Q
    ||||||||| | ||||  ||||||||||||  || |||||||||| || |||| ||||||||||| |||| ||||||    
T  22629060 gaagagattttaaaaaatgtagaaattaggattgctcttggagagcttattgaagttaatttcttataactcttttg 22628984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 37782136 - 37782092
Alignment:
Q  83 tgagaggttctcttgcgttgggaaacatttgtaaacactttgggt 127  Q
    ||||||| ||||||| ||||| |||||||||||||||| ||||||    
T  37782136 tgagaggctctcttgggttggaaaacatttgtaaacaccttgggt 37782092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 48893712 - 48893676
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||| |||||| |||||||||||||||||    
T  48893712 aactctttgatagtggattggagagatcaatctctcc 48893676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 235
Target Start/End: Original strand, 41266896 - 41267049
Alignment:
Q  83 tgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaa 182  Q
    ||||||||||||||| ||||||| ||| ||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||| ||| ||||||||||||||    
T  41266896 tgagaggttctcttgggttgggagacagttgtaaatactttgggtgagtgaaatcattgagtctcttgttcttaggaagagtttgagaaaatggtagaaa 41266995  T
Q  183 ttagg-tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||| | ||||||| ||||  |||||||   |||||||||||||| |||||||    
T  41266996 ttaggttttgttcttagagaacttgttgagactaatttcttgtaactcttttgt 41267049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 235
Target Start/End: Complemental strand, 3232045 - 3231884
Alignment:
Q  75 agttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||| ||||||| || || |||||||||||||| ||||| ||||||||||| |||||     
T  3232045 agttcttttgagaggttctcttgagttgggaaacattagtaaacaccttgggtgggtgaattcattgagtctcttgttcttaggaagagattgagaaaaa 3231946  T
Q  175 ggtagaaattagg-tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     |||||||||||| | ||||||| | ||| ||||||| | |||||| || ||||| ||||||    
T  3231945 tgtagaaattaggctttgttcttcgtgagcttgttgaagctaattttttttaaccattttgt 3231884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 38863805 - 38863926
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg- 187  Q
    ||||||||| |||||||||||||||||||||  ||||  |||||||||||||||||||||| ||||||| ||||||||  | |||||||||||||||||     
T  38863805 gttctcttgggttgggaaacatttgtaaacatcttgga-gagtaaaatcattgagtctcttgttcttggaaagagattagggaaatggtagaaattaggt 38863903  T
Q  188 tatgttcttggagagtttgttga 210  Q
    | |||| | ||||||||||||||    
T  38863904 tttgttttgggagagtttgttga 38863926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 18141753 - 18141900
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaatta 185  Q
    |||||||||  |||||||||||||||||||||| ||||| |||| ||||||||||||| |||| ||| | ||  |||||||||||||| |||||||||||    
T  18141753 ggttctcttaggttgggaaacatttgtaaacaccttgggcgagtgaaaatcattgagtgtcttgttcattgg-tgagattgtgaaaatgggtagaaatta 18141851  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||| ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  18141852 ggt-tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 18141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 7597535 - 7597694
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatg 175  Q
    ||||||||||||| ||||||||  |||||||||||||||||| || ||| ||||||  ||||||||||||| || |||||||||||||||||  ||||      
T  7597535 gttctcttgagagtttctcttggattgggaaacatttgtaaataccttgagtgagt-gaatcattgagtcttttgttcttgggaagagattggaaaaaga 7597633  T
Q  176 gtagaaattagg-tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | | |||| ||| | ||||||||||||| ||||||| | ||||||||| ||| ||||||||    
T  7597634 gaataaatcaggttttgttcttggagagcttgttgaagctaatttcttataatccttttgt 7597694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 29796558 - 29796418
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaat-tag 186  Q
    |||||||||| ||||||||||||||||||| |  ||||| |||| || |||||||||||||| |||||| |||||||||| |||||  ||||||||  ||    
T  29796558 ggttctcttgggttgggaaacatttgtaaatatcttgggcgagtgaattcattgagtctcttgttcttgagaagagattgggaaaagagtagaaatcaag 29796459  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    || ||||||||||||  ||||||| | | ||||||||||||    
T  29796458 gtttgttcttggagaacttgttgaagctgatttcttgtaac 29796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 8965914 - 8965781
Alignment:
Q  101 tgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaatta-ggtatgttcttgg 198  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| ||||||||||| ||| |||||||      
T  8965914 tgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaaaggtagaaattagggtttgttcttta 8965816  T
Q  199 agagtttgttgatgttaatttcttgtaaccctttt 233  Q
     ||||||||||| ||||||||||| ||||||||||    
T  8965815 tgagtttgttgaagttaatttcttataaccctttt 8965781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 11712242 - 11712091
Alignment:
Q  83 tgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaa 182  Q
    ||||||||| ||||| |||  ||| ||||||||||||  |||| ||||| |||||||||||||| || ||||| ||||||||||| ||||||  || |||    
T  11712242 tgagaggttttcttgggttccgaagcatttgtaaacatcttggatgagtgaaatcattgagtcttttgttctttggaagagattgagaaaataatataaa 11712143  T
Q  183 ttagg-tatgttcttggagagtttgttgatgttaatttcttgtaaccctttt 233  Q
    ||||| | ||||| | ||||| ||||||| | |||||||||| |||||||||    
T  11712142 ttaggttttgttccttgagagcttgttgaagctaatttcttgaaaccctttt 11712091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 32902421 - 32902270
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatg 175  Q
    |||||||||||||||| |||||  |||||||||||||| || ||| ||  |||||| |||||||||||||||||  || || || |||||||  |||  |    
T  32902421 gttctcttgagaggttatcttggattgggaaacatttgaaagcacattaagtgagtgaaatcattgagtctcttgatcatgagaggagattgataaatgg 32902322  T
Q  176 gtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |||||||||| || ||||| |||||| | |||||| | ||||||||||||||    
T  32902321 gtagaaattatgtttgttcatggagactctgttgaagctaatttcttgtaac 32902270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 229
Target Start/End: Original strand, 40321001 - 40321154
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||| ||| |||| | ||||||||||||| |||| ||| | ||  ||||||| ||||||    
T  40321001 gttctcttgaggggttctcttgagttgggaaaca-ttgtaaacaccttgagtgactgaaaatcattgagtgtcttgttcatagg-tgagattgggaaaat 40321098  T
Q  175 -ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaaccc 229  Q
     |||||||||||||  ||||| | | ||| ||||||| ||||||||||||||||||    
T  40321099 gggtagaaattagggttgttcattgtgagcttgttgaagttaatttcttgtaaccc 40321154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 227
Target Start/End: Original strand, 30291526 - 30291679
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    ||||||||||| |||| | ||| |||||||||||||||||||||| |||||||| | ||||||||||||| |||| ||| | ||  ||||||| ||||||    
T  30291526 gttctcttgaggggtttttttgggttgggaaacatttgtaaacaccttgggtgattgaaaatcattgagtgtcttgttcattgg-tgagattgagaaaat 30291624  T
Q  175 -ggtagaaattagg-tatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
     ||||||||||||| | ||||||| | ||| ||||||| | ||||||||||||||    
T  30291625 gggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaac 30291679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 4731592 - 4731738
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  4731592 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 4731689  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  || |||| | ||| |||||||   |||||||||||||||| |||||    
T  4731690 ggttgctctttgtgagcttgttgaacctaatttcttgtaacccatttgt 4731738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 15212720 - 15212866
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||| | |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  15212720 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcattggt-gagattgggaaaatgggtagaaattag 15212817  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  15212818 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 15212866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 27811212 - 27811358
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||  ||||| ||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  27811212 gttctcttaggttggaaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 27811309  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  27811310 ggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 27811358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 227
Target Start/End: Complemental strand, 41365081 - 41364943
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||| ||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| |||  |    ||||||| |||||| ||||||||||||    
T  41365081 gttcttttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcaagact-gagattgggaaaattggtagaaattag 41364984  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    || ||||||| | ||||||||| | | ||||||||||||||    
T  41364983 gtttgttctttgtgagtttgtttaagctaatttcttgtaac 41364943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 11137007 - 11137105
Alignment:
Q  136 tcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||||| || ||| ||| ||||||||| ||||||||||||||||| |||||| |||| |||  ||||||| | ||||||||| ||||| ||||||    
T  11137007 tcattgagtctatttttcatgg-aagagattgagaaaatggtagaaattaagtatgtccttgaagaacttgttgaagctaatttcttataaccgttttgt 11137105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 43036357 - 43036494
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| ||||||||||||    
T  43036357 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaattag 43036454  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaa 226  Q
    |  ||||||| | ||  |||||||   |||||||||||||    
T  43036455 ggttgttctttgtgaacttgttgaaactaatttcttgtaa 43036494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 229
Target Start/End: Complemental strand, 1345605 - 1345465
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatg-gtagaaattag 186  Q
    ||||||||| ||||||||| ||| |||||||| |||||||||| ||||||||||| | |||| ||| |  |  ||||||| ||||||| |||||||||||    
T  1345605 gttctcttgagttgggaaatatt-gtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcatttgt-gagattgggaaaatgtgtagaaattag 1345508  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaaccc 229  Q
    |  ||||||| | |||||| |||| | ||||||||||||||||    
T  1345507 ggttgttctttgtgagtttattgaagctaatttcttgtaaccc 1345465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 7445009 - 7444911
Alignment:
Q  132 aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaaccct 230  Q
    |||||| ||||||||||| ||| ||||||||||||| |||| ||||||||||||| | ||||||   | || ||||||| || ||||| ||||||||||    
T  7445009 aaaatctttgagtctcttgttcatgggaagagattgagaaattggtagaaattagatttgttctaatatagcttgttgaagtaaatttgttgtaaccct 7444911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 44353736 - 44353865
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| |  |  ||||||| |||||| |||||||||||||  |||||||    
T  44353736 gttgggaaacaattgtaaacacattgggtgagtaaaaatcattgagtatcttgttcatttg-tgagattgggaaaatgggtagaaattagggttgttctt 44353834  T
Q  197 ggagagtttgttgatgttaatttcttgtaac 227  Q
     | ||  ||||||| | ||||||||||||||    
T  44353835 tgtgaacttgttgaagctaatttcttgtaac 44353865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 30143276 - 30143420
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| |||||||||  || |||| ||| | ||   |||||| |||||| ||||||||||||    
T  30143276 gttctcttgggttgggaaaca-ttgtaaacacattgggtgagtgaaaatcatt--gtgtcttgttcattgg-ccagattgggaaaatgggtagaaattag 30143371  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  30143372 ggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 30143420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 227
Target Start/End: Complemental strand, 1292697 - 1292559
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||| ||| ||||||||||| | || ||||| |||||||||| ||||| ||||||| |||| ||||| ||  ||||||| |||||||| |||||||||     
T  1292697 gttcttttgggttgggaaacact-gtgaacaccttgggtgagtgaaaattattgagtgtcttgttctttggt-gagattgagaaaatgggtagaaattaa 1292600  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    || ||||||| | ||| ||||||| | ||||||||||||||    
T  1292599 gtttgttctttgtgagcttgttgaagctaatttcttgtaac 1292559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 33352084 - 33352230
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||| ||| | ||  ||||||| |||||| |||| |||||||    
T  33352084 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgattgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggtaaaaattag 33352181  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  |||||||   |||||||||||||||| |||||    
T  33352182 ggttgttctttgtgaacttgttgaacctaatttcttgtaacccatttgt 33352230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 1872159 - 1872088
Alignment:
Q  74 gagttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagt 144  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||| || |||| ||||| |||||||||||||    
T  1872159 gagttttcttgagaggttctcttggattggaaaacatttgtaaatacattggctgagtgaaaatcattgagt 1872088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 31218191 - 31218337
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtg--aaaatggtagaaatta 185  Q
    ||||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||| |||| ||| | ||  ||||||| |  ||||||||||||||||    
T  31218191 gttctcttgggttgggaaaca-ttgtaaacacctt-ggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaaaatggtagaaatta 31218287  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||  ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  31218288 gggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 31218337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 40221689 - 40221825
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||||| ||  |||||||  ||||||| |||||||||||  |||||||    
T  40221689 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttctttggt-gagattggtaaaatgggtagaaattagggttgttctt 40221786  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| |||||||   |||||||||||||||| |||||    
T  40221787 tgtgagcttgttgaaactaatttcttgtaacccatttgt 40221825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 42435215 - 42435079
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||| ||||| |||||||||||||||| |||| |||||||| |||| |||| ||| | ||  |||||||  ||||||| |||||||||||  |||||||    
T  42435215 gttggtaaacaattgtaaacactttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattggaaaaatgggtagaaattagggttgttctt 42435118  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||||||||||||| |||||    
T  42435117 tgtgagcttgttgaagctaatttcttgtaacccatttgt 42435079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 42498128 - 42498274
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat--ggtagaaatta 185  Q
    ||||||||| |||||||||| || |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| |||||   |||||||||||    
T  42498128 gttctcttgggttgggaaacgtt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaaaaaggtagaaatta 42498224  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||  ||||||| | ||  ||||||| | ||||||||||||||||||||||    
T  42498225 gggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgt 42498274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 3303905 - 3303766
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaatta 185  Q
    |||||||||| ||||||||||| |||||||||| ||| |||||| ||||||||||||| |||| ||  | ||  ||||||| |||||| |||||||||||    
T  3303905 ggttctcttgggttgggaaaca-ttgtaaacaccttgagtgagtgaaaatcattgagtatcttgtttattgg-tgagattgggaaaatgggtagaaatta 3303808  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
     || ||||||| | ||| ||||| |   ||||||||||||||    
T  3303807 agtttgttctttgtgagcttgtttaacctaatttcttgtaac 3303766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 19491922 - 19491787
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttcttg 197  Q
    ||||||||||||  |||||||  |||||||||| |||  ||||||| |||| ||| | ||  ||||||| |||||||| |||||||||||| |||||||     
T  19491922 gttgggaaacatc-gtaaacatcttgggtgagtgaaaatattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggtttgttcttt 19491825  T
Q  198 gagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | ||| |||||||   |||||||||||||||| |||||    
T  19491824 gtgagcttgttgaaactaatttcttgtaacccatttgt 19491787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 34254542 - 34254419
Alignment:
Q  111 ttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttg 209  Q
    |||||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| |||||||||||||  ||||||| | ||  ||||      
T  34254542 ttgtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaagggtagaaattagggttgttctttgtgaacttgtca 34254445  T
Q  210 atgttaatttcttgtaacccttttgt 235  Q
    | ||||||||||||||||||||||||    
T  34254444 aagttaatttcttgtaacccttttgt 34254419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 34256697 - 34256595
Alignment:
Q  132 aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaaccctt 231  Q
    ||||||||||||| |||| ||| | ||  |||||||  ||||||||||||||||||  ||||||| | ||  ||||  | ||||||||||||||||||||    
T  34256697 aaaatcattgagtgtcttgttcattggt-gagattggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaaccctt 34256599  T
Q  232 ttgt 235  Q
    ||||    
T  34256598 ttgt 34256595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 3318786 - 3318740
Alignment:
Q  86 gaggttctcttgcgttgggaaacatttgtaaacactttgggtgagta 132  Q
    |||||||||||| ||| ||||||||||| |||||| |||||||||||    
T  3318786 gaggttctcttgggttaggaaacatttgaaaacaccttgggtgagta 3318740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 4283468 - 4283604
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| || || |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||| ||    
T  4283468 gttgggaaacaattgtaaacaccttaggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttttt 4283565  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||||||||||||| |||||    
T  4283566 tgtgagcttgttgaagctaatttcttgtaacccatttgt 4283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 4743435 - 4743292
Alignment:
Q  91 tctcttgcgttgggaaacatttgtaaacactttgggtgag-taaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattaggt 188  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||| |||| ||| | ||  |||||||  ||||| ||||| ||||||||    
T  4743435 tctcttgggttgggaaaca-ttgtaaacaccttgggtgagcgaaaatcattgagtgtcttgttcattgg-tgagattggaaaaatgggtag-aattaggt 4743339  T
Q  189 atgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     ||||||| | | ||||||||| | |||  ||||||||||| |||||    
T  4743338 ttgttctttgtgtgtttgttgaagctaaaatcttgtaacccatttgt 4743292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 12702787 - 12702721
Alignment:
Q  170 aaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgtg 236  Q
    |||| |||||||||||||  ||||||| | ||  ||||||| | |||||||||||||||||||||||    
T  12702787 aaaagggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtg 12702721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 10929734 - 10929876
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| |||||||| |||| |||||||| |||| | ||| ||||||||||||| |||| ||||| ||  |||||   |||||| |||||||||||     
T  10929734 gttctcttgggttgggaa-catt-gtaaacaccttggattagtgaaaatcattgagtgtcttgttctttgg-tgagatatggaaaatgggtagaaattat 10929830  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttt 232  Q
    || ||||||| | ||| ||||||| | |||||||||||||| ||||    
T  10929831 gtttgttctttgtgagcttgttgaagctaatttcttgtaactcttt 10929876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 4696399 - 4696431
Alignment:
Q  11 caaaggagataactttagggttgagtatctttg 43  Q
    |||||||||||||||||||||||||| ||||||    
T  4696399 caaaggagataactttagggttgagtgtctttg 4696431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 6599066 - 6599102
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  6599066 aactcattgatagtggattagagagatcaatctctcc 6599102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 6674519 - 6674555
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  6674519 aactcattgatagtggattagagagatcaatctctcc 6674555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 8153695 - 8153751
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagt 144  Q
    ||||| ||| ||||||||||||||||| |||| |||| ||||| |||||||||||||    
T  8153695 gttcttttgggttgggaaacatttgtatacaccttggatgagtgaaaatcattgagt 8153751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 10930423 - 10930293
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| ||||||||| |||||| |||| ||||||| ||||| |||| ||| | ||  ||||||| |||||||| |||||||||||  || ||||    
T  10930423 gttgggaaacaattgtaaacattttgggagagtgaaaatca-tgagtgtcttgttcatcgg-tgagattgggaaaatggatagaaattagggttgctctt 10930326  T
Q  197 ggagagtttgttgatgttaatttcttgtaaccc 229  Q
     | ||| | ||||| | ||||||||||||||||    
T  10930325 tgtgagctcgttgaagctaatttcttgtaaccc 10930293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 11384005 - 11384057
Alignment:
Q  175 ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |||||||||||||  ||||||| | ||||||||||| | ||||||||||||||    
T  11384005 ggtagaaattagggttgttctttgtgagtttgttgaagctaatttcttgtaac 11384057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 11712082 - 11712038
Alignment:
Q  252 ttgtaaataactctttgataatggattagagagatcaatctctcc 296  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||    
T  11712082 ttgtaaataactcattgatagtggattgaagagatcaatctctcc 11712038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 15212880 - 15212916
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  15212880 aactcattgataatggattggagagatcaatctctcc 15212916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 18141914 - 18141950
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||| |||||| |||||||||||||||||    
T  18141914 aactctttgatagtggattggagagatcaatctctcc 18141950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 18655494 - 18655530
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  18655494 aactcattgatagtggattagagagatcaatctctcc 18655530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 40321167 - 40321210
Alignment:
Q  252 ttgtaaataactctttgataatggattagagagatcaatctctcc 296  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||    
T  40321167 ttgtaaa-aactctttgatagtggattggagagatcaatctctcc 40321210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 1314057 - 1313893
Alignment:
Q  72 aggagttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaa 171  Q
    ||||||||||||||||||  ||||||  ||||||||||||||||||||| |||||||||| |||| |||||||||||| |||||| |||||||||| |||    
T  1314057 aggagttctcttgagaggacctcttggattgggaaacatttgtaaacaccttgggtgagtgaaattattgagtctcttattcttgagaagagattgagaa 1313958  T
Q  172 aatggtagaaatta-ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || |||| |||||| | | ||||||||||||| ||||| | | |||||||||| || ||||||||    
T  1313957 aagggtaaaaattatgttttgttcttggagagcttgttaaagctaatttcttgcaagccttttgt 1313893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 228
Target Start/End: Complemental strand, 44700722 - 44700573
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggt 177  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| |||    
T  44700722 tcttgaggggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggt 44700624  T
Q  178 agaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacc 228  Q
    ||||||||||  ||||||| | ||||||||||| | |||||||||||||||    
T  44700623 agaaattagggttgttctttgtgagtttgttgaagctaatttcttgtaacc 44700573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 31314366 - 31314525
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||| | ||  ||||||| ||||||    
T  31314366 gttctcttgaggggttctcttgggttgggaaaca-ttgtaaacactttgggtgagtgaaaatcattgagtgtcttgttcatagg-tgagattgagaaaat 31314463  T
Q  175 -ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     |||||||||||||  ||||| | | ||  ||||||| | |||||||||||||||| |||||    
T  31314464 gggtagaaattagggttgttcattgtgatcttgttgaagctaatttcttgtaacccatttgt 31314525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 8166702 - 8166545
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtct--cttcttcttgggaagagattgtgaaaatgg 176  Q
    |||||| ||||||||||| ||||  |||||||||||||||| ||||||| || ||||||||||||| |  ||| ||| ||| |||||||||  |||   |    
T  8166702 tcttgaaaggttctcttgagttgaaaaacatttgtaaacacattgggtgggtgaaaatcattgagtgtgtcttgttcatgg-aagagattgataaatgag 8166604  T
Q  177 tagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||||||||| ||||||||||||||||||||| |||||| |||| ||||| ||||||    
T  8166603 tagaaattaggtttgttcttggagagtttgttgaagttaatatcttataacctttttgt 8166545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 29196631 - 29196474
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggt 177  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| |||    
T  29196631 tcttgagaggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggt 29196533  T
Q  178 agaaatta-ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||||| ||| ||||||| | ||| ||||  | | |||||||||| ||||| |||||    
T  29196532 agaaattagggtttgttctttgtgagcttgtcaaagctaatttcttggaacccatttgt 29196474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 35138928 - 35138794
Alignment:
Q  103 ggaaacatttgt-aaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggag 200  Q
    ||||||| |||| |||||| ||||| |||| ||||||||||||| |||| ||| ||| ||||||||| ||||  ||||||||||| || ||||||||| |    
T  35138928 ggaaacaattgtgaaacaccttgggagagtgaaaatcattgagtgtcttgttcatggaaagagattgagaaatgggtagaaattatgtttgttcttggtg 35138829  T
Q  201 agtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||||||| |||||||||||| ||| |||||||    
T  35138828 agtttgttgaagttaatttcttgcaactcttttgt 35138794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 5236690 - 5236544
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  5236690 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 5236593  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  5236592 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 5236544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 3148215 - 3148086
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttg 197  Q
    ||||||||||| ||||||||| ||||| ||||| ||||| ||||||||| || ||  ||||||||||||| ||||  | |||||||||||| | ||||||    
T  3148215 gttgggaaacaattgtaaacattttgg-tgagtgaaaataattgagtcttttgtttgtgggaagagattgagaaatggatagaaattaggtttcttcttg 3148117  T
Q  198 gagagtttgttgatgttaatttcttgtaacc 228  Q
     |||| ||||||| | |||||||||||||||    
T  3148116 aagagcttgttgaagctaatttcttgtaacc 3148086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 20937635 - 20937736
Alignment:
Q  134 aatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttt 232  Q
    |||||||||||||||| ||| | | ||||||| | |||||| ||||||||||| || |||| |||||||| ||||||| |||||||||||||||||||||    
T  20937635 aatcattgagtctcttgttcatagaaagagatcg-gaaaataggtagaaattatgtttgtttttggagagcttgttgaagttaatttcttgtaacccttt 20937733  T
Q  233 tgt 235  Q
    |||    
T  20937734 tgt 20937736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 26323300 - 26323162
Alignment:
Q  99 gttgggaaacatttgt-aaacactttgggtgagtaaa-atcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttctt 196  Q
    ||||||||||| |||  |||||| ||| |||||| || |||||| ||| |||| ||| ||||| ||||||| ||||| |||| ||||||||| |||| ||    
T  26323300 gttgggaaacaattgggaaacaccttgagtgagtgaacatcattaagtgtcttgttcatgggatgagattgagaaaagggtaaaaattaggtttgttttt 26323201  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | |||||||||||| | ||||||||||||||| ||||||    
T  26323200 gaagagtttgttgaagctaatttcttgtaacctttttgt 26323162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 22835236 - 22835090
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||| ||| |||||||||| ||||||||||||| |||| ||| |  |  ||||||| |||||||| ||||||||||    
T  22835236 gttctcttgtgttgggaaacatt-gtaatcaccttgggtgagtgaaaatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattag 22835139  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  22835138 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 22835090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 40734432 - 40734570
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  40734432 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 40734529  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |  ||||||| | ||| |||||||   ||||||||||||||    
T  40734530 ggttgttctttgtgagcttgttgaacctaatttcttgtaac 40734570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 23392146 - 23391997
Alignment:
Q  86 gaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatg-gtagaaat 183  Q
    |||||||||||| ||||||||||||| |||||||| |||||||||| ||||||||| ||| |||| ||| | ||  ||| ||| ||||||| ||||||||    
T  23392146 gaggttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcatttagtgtctttttcattggt-gagtttgggaaaatgagtagaaat 23392049  T
Q  184 taggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || || ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  23392048 taagtttgttctttgtgagcttgtttaagataatttcttgtaacccatttgt 23391997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 45095099 - 45095243
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||||||||||||||    
T  45095099 gttctcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatggtagaaattagg 45095195  T
Q  188 tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
      ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  45095196 gttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 45095243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 227
Target Start/End: Original strand, 32891036 - 32891176
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaatt- 184  Q
    |||||||||| | ||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||||| ||  ||||||| |||||| ||||||||||     
T  32891036 ggttctcttggggtgggaaacatt-gtaaacaccttgggtgagtaaaaatcattgagtgtcttgttcttcgg-tgagattgagaaaatgggtagaaatta 32891133  T
Q  185 aggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    || | ||||||| | ||| ||||||| | ||||||||||||||    
T  32891134 agttttgttctttgtgagcttgttgaagctaatttcttgtaac 32891176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 233
Target Start/End: Original strand, 33191780 - 33191910
Alignment:
Q  104 gaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaatta-ggtatgttcttggagag 202  Q
    ||||||||||||||||  || ||||| | |||| |||||||||||| || |||| ||||||||| |||||| ||||||| || | | ||||||| |||||    
T  33191780 gaaacatttgtaaacatattaggtgattgaaataattgagtctcttgttattggtaagagattgagaaaatagtagaaactatgttttgttcttagagag 33191879  T
Q  203 tttgttgatgttaatttcttgtaaccctttt 233  Q
     ||||||| | ||| ||||||||||| ||||    
T  33191880 cttgttgaagctaagttcttgtaaccatttt 33191910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 37761720 - 37761559
Alignment:
Q  74 gagttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaa 173  Q
    |||||||||||| ||| |||| |  |||  ||||||||||||||||| ||||  ||||||| ||||| |||||||| ||||||| |||||| || |||||    
T  37761720 gagttctcttgaaaggatctcctaggttatgaaacatttgtaaacaccttggacgagtaaattcattaagtctcttgttcttggaaagagaatgagaaaa 37761621  T
Q  174 tggtagaaatt-aggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttg 234  Q
     |||| ||||| |||| ||||||| | | | ||||| |   |||||| ||||||||||||||    
T  37761620 aggtaaaaattaaggtttgttctttgtgggcttgttaaaactaatttattgtaacccttttg 37761559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 760781 - 760927
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| |||||||||||||  ||||||| |||| ||||| ||||||||||||| |||| ||| |  |  ||||||| |||||||| ||||||||||    
T  760781 gttctcttgggttgggaaacatta-taaacaccttggatgagtgaaaatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattag 760878  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  760879 gtctgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 760927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 227
Target Start/End: Complemental strand, 39153595 - 39153457
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||| | ||||||||||||| |||| ||| || |  ||||||| |||||||| ||||||||||    
T  39153595 gttctcttgggttgggaaacatt-gtaaacaccttgggtgaatgaaaatcattgagtgtcttgttcatgtgt-gagattgggaaaatgggtagaaattag 39153498  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    || ||||| | | ||| ||||| | | ||||||||||||||    
T  39153497 gtttgttcattgtgagcttgtttaagctaatttcttgtaac 39153457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 44331479 - 44331625
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||  |||||||| ||||||||||    
T  44331479 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattaggaaaatgggtagaaattag 44331576  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||| | | ||| ||||||| | ||||||||||||| || |||||    
T  44331577 ggttgttcattgtgagcttgttgaagctaatttcttgtaagccatttgt 44331625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 9666703 - 9666641
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctctt 149  Q
    |||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  9666703 ggttctcttcagttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtctt 9666641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 1683457 - 1683546
Alignment:
Q  136 tcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgta 225  Q
    |||| ||||||||| ||| ||| || |||||| ||||||||||||||||| ||  |||||| ||||| || |||||| ||||||||||||    
T  1683457 tcatcgagtctcttgttcatggaaatagattgagaaaatggtagaaattaagttcgttcttcgagagcttattgatgctaatttcttgta 1683546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 23200374 - 23200226
Alignment:
Q  85 agaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtg-aaaatggtagaaa 182  Q
    |||| |||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||| |||| |||||||   ||||||| | |||||||||||||    
T  23200374 agagtttctcttgggttgggaaaca-ttgtaaacacctt-ggtgagtgaaaatcattgagtgtcttgttcttgg--tgagattgggaaaaatggtagaaa 23200279  T
Q  183 ttaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||   ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  23200278 ttagagttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 23200226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 4055943 - 4055860
Alignment:
Q  144 tctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacc 228  Q
    |||||| ||| ||||||||||||| ||||  |||||||||||||| ||||||||||||  ||||  | |||||||||||||||||    
T  4055943 tctcttgttcatgggaagagattgggaaatgggtagaaattaggt-tgttcttggagaacttgtaaaagttaatttcttgtaacc 4055860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 19684123 - 19683977
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||| | |||| ||| |  |  ||||||| |||||| ||||||||||||    
T  19684123 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcatttg-tgagattgggaaaatgggtagaaattag 19684026  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  19684025 ggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 19683977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 29682293 - 29682439
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||  |  |  ||||||| |||||| |||||||||||     
T  29682293 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgtttatttg-tgagattgggaaaatgggtagaaattat 29682390  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||| ||||| | | ||||||||||| |||| |||||    
T  29682391 gtttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgt 29682439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 46860416 - 46860554
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagtaaaa--tcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttct 195  Q
    |||| |||||| |||||||||| ||||| |||| |||  ||| ||||| |||| ||| | ||  ||||||| |||||||| |||||||||||| ||||||    
T  46860416 gttgagaaacaattgtaaacaccttgggagagtgaaaattcaatgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattaggtttgttct 46860514  T
Q  196 tggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | | ||| ||||||| | |||||||||||||||| |||||    
T  46860515 ttgtgagcttgttgaagctaatttcttgtaacccatttgt 46860554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 49199694 - 49199564
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||||||||| |||| ||||||| ||||| |||| ||| | ||  ||||||| |||||| ||||||||||| |  |||||||    
T  49199694 gttgggaaacaattgtaaacactttgggagagtgaaaatca-tgagtgtcttgttcgttgg-tgagattgggaaaatgggtagaaattaaggttgttctt 49199597  T
Q  197 ggagagtttgttgatgttaatttcttgtaaccc 229  Q
     | ||| ||||||| | ||||||||||||||||    
T  49199596 tgtgagcttgttgaagctaatttcttgtaaccc 49199564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 233
Target Start/End: Complemental strand, 5434102 - 5433966
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtga--aaatggtagaaattagg-tatgttc 194  Q
    ||||||||||| |||||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||  ||||||||||||||||| | |||||    
T  5434102 gttgggaaacaattgtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggagaaaatggtagaaattagggtttgttc 5434005  T
Q  195 ttggagagtttgttgatgttaatttcttgtaaccctttt 233  Q
    || | ||| ||||| | | ||||||||||||||||||||    
T  5434004 tttgtgagcttgttaaagctaatttcttgtaaccctttt 5433966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 9581217 - 9581362
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| |  |  | ||||  ||||  |||||||||||||    
T  9581217 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttg-tgggattcggaaatgggtagaaattagg 9581314  T
Q  188 tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | ||||||| | ||| ||||| | | ||||||||| |||||| |||||    
T  9581315 tttgttctttgtgagcttgtttaagctaatttcttttaacccatttgt 9581362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 4569895 - 4570024
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||| ||||| |||||||||| |||||||||| ||||||||||||| | || ||||| ||  ||||||| |||||||| |||||||||||  ||||| |    
T  4569895 gttggaaaacaattgtaaacaccttgggtgagtgaaaatcattgagtgttttgttctttggt-gagattgggaaaatgggtagaaattagggttgttcat 4569993  T
Q  197 ggagagtttgttgatgttaatttcttgtaac 227  Q
     | ||| || |||| | ||||||||||||||    
T  4569994 tgtgagcttattgaagctaatttcttgtaac 4570024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 43403969 - 43403841
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||||||||| |||| ||||||| ||||| |||| ||| | ||  ||||||| |||||| |||||||||||||  |||||||    
T  43403969 gttgggaaacaattgtaaacactttgggagagtgaaaatca-tgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaattaggcttgttctt 43403872  T
Q  197 ggagagtttgttgatgttaatttcttgtaac 227  Q
     | ||| ||||||| | | ||||||||||||    
T  43403871 tgtgagcttgttgaagctcatttcttgtaac 43403841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 23198175 - 23198027
Alignment:
Q  85 agaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtg-aaaatggtagaaa 182  Q
    |||| |||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||| |||| |||||||   ||||||| | |||||||||||||    
T  23198175 agagtttctcttgggttgggaaaca-ttgtaaacacctt-ggtgagtgaaaatcattgagtgtcttgttcttgg--tgagattgggaaaaatggtagaaa 23198080  T
Q  183 ttaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||   |||| || | ||  ||||  | | ||||||||||||||||||||||    
T  23198079 ttagagttgttttttgtgaacttgtcaaagctaatttcttgtaacccttttgt 23198027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 24635277 - 24635329
Alignment:
Q  175 ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    ||||||||||| || ||||||||||||||||||||| | |||||| |||||||    
T  24635277 ggtagaaattaagtttgttcttggagagtttgttgaagctaattttttgtaac 24635329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 28253889 - 28253822
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgag 143  Q
    ||||||||||| |||||||||  ||||| ||||| ||||||||| ||||| ||||| || ||||||||    
T  28253889 gttctcttgaggggttctctttagttggaaaacaattgtaaacaatttggatgagtgaattcattgag 28253822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 228
Target Start/End: Original strand, 30236069 - 30236198
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| |||||  ||| |||||||| |||| |||| ||| | | | ||||||| |||||||| |||||||||||  |||||||    
T  30236069 gttgggaaacaattgtaaacaccttgggatagtgaaaatcat-gagtgtcttgttcattg-atgagattgggaaaatgggtagaaattagggttgttctt 30236166  T
Q  197 ggagagtttgttgatgttaatttcttgtaacc 228  Q
     | ||| ||||||| | |||||||||||||||    
T  30236167 tgtgagcttgttgaagctaatttcttgtaacc 30236198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 33191917 - 33191960
Alignment:
Q  252 ttgtaaataactctttgataatggattagagagatcaatctctc 295  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||    
T  33191917 ttgtaaagaactcattgatagtggattagagagatcaatctctc 33191960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 50432845 - 50432754
Alignment:
Q  133 aaatcattgagtctcttcttcttgggaagagatt-gtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttg 223  Q
    |||||||||||||||||  ||   ||| |||||| | ||||| |||||||||||||| || ||||||||||  |||||| ||||||||||||    
T  50432845 aaatcattgagtctcttggtcacaggatgagattcgggaaaagggtagaaattaggtctgctcttggagagcgtgttgaagttaatttcttg 50432754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 6095823 - 6095687
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatg-gtagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| ||||||| ||||||||||||  |||||||    
T  6095823 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttattcattggt-gagattgggaaaatgagtagaaattagggttgttctt 6095726  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     |  |  || |||| |||||||||||||||||| |||||    
T  6095725 tgtaaacttcttgaagttaatttcttgtaacccatttgt 6095687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 43402026 - 43401898
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||  |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||||||    
T  43402026 gttgggaaacgattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctt 43401929  T
Q  197 ggagagtttgttgatgttaatttcttgtaac 227  Q
     | ||| ||||||| | ||||||||||||||    
T  43401928 tgtgagcttgttgaagctaatttcttgtaac 43401898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 54593648 - 54593784
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatg-gtagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| ||||||| ||||| |||| ||| | ||  ||||||| ||||||| | ||||||||||  |||||||    
T  54593648 gttgggaaacaattgtaaacaccttgggagagtgaaaatca-tgagtgtcttgttcattgg-tgagattgggaaaatgtgcagaaattagggttgttctt 54593745  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||| ||||||||| |||||    
T  54593746 tgtgagcttgttgaagctaatttattgtaacccatttgt 54593784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 40735317 - 40735456
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||| ||||||||| |||||||| ||||   ||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  40735317 gttctcttgggttaggaaacatt-gtaaacaccttggaaaagtgaaaatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattag 40735414  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacc 228  Q
    |  ||||||| | ||| ||||||| | |||||| ||||||||    
T  40735415 ggttgttctttgtgagcttgttgaagctaatttattgtaacc 40735456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 46173376 - 46173437
Alignment:
Q  174 tggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||||||||  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  46173376 tggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 46173437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 53921738 - 53921599
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaatta 185  Q
    |||| ||||| ||||| ||||||| ||||| || |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||||||| |||||||||    
T  53921738 ggttttcttgggttggaaaacatt-gtaaaaaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaatta 53921641  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    ||| |||| || | ||| ||||| | | ||||||||||||||    
T  53921640 ggtttgttgtttgtgagcttgttaaagctaatttcttgtaac 53921599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 2020098 - 2020190
Alignment:
Q  105 aaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttg 197  Q
    |||||| |||||||   ||| |||||| || |||||||||||||| ||  ||||||||||||| ||||  ||||||| |||| | ||||||||    
T  2020098 aaacatctgtaaacgtattgtgtgagtgaattcattgagtctcttgtttatgggaagagattgagaaatgggtagaagttagatttgttcttg 2020190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 2075306 - 2075231
Alignment:
Q  74 gagttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctctt 149  Q
    ||||||| |||||| ||| ||||| |||||||||||||| ||||||| || | ||||| ||||||||||||| ||||    
T  2075306 gagttcttttgagaagttatcttgggttgggaaacatttataaacacctt-gctgagtgaaaatcattgagtgtctt 2075231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 7762200 - 7762345
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||| ||| || ||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| || ||||||||||    
T  7762200 gttctcttgggttgggaaatatt-gtgaacaccttgg-tgagtgaaaatcattgagtgtcttattcattggt-gagattgagaaaaagggtagaaattag 7762296  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||| |||||||    
T  7762297 ggttgttctttgtgaacttgttgaagctaatttcttgtaactcttttgt 7762345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 23410566 - 23410503
Alignment:
Q  86 gaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctctt 149  Q
    |||||||||||| ||||| ||||| |||||||||| ||| |||||| ||||||||||||| ||||    
T  23410566 gaggttctcttgggttggaaaaca-ttgtaaacaccttgagtgagtgaaaatcattgagtgtctt 23410503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 25173717 - 25173618
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgt-gaaaatggtagaaattaggtatgttcttg 197  Q
    |||| |||||| |||||||||| |||| | ||| |||||||||||||||||  ||  ||  ||||||| | ||||| |||||||||||||| ||||||||    
T  25173717 gttgagaaacaattgtaaacaccttgg-taagtgaaatcattgagtctcttggtcacggctagagattctggaaaagggtagaaattaggtttgttcttg 25173619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 44700552 - 44700516
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||| |||||| |||||||||||||||||    
T  44700552 aactctttgatagtggattggagagatcaatctctcc 44700516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 47649878 - 47649846
Alignment:
Q  11 caaaggagataactttagggttgagtatctttg 43  Q
    |||||||||||||||||||||||||| ||||||    
T  47649878 caaaggagataactttagggttgagtgtctttg 47649846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 51352361 - 51352317
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacac 120  Q
    |||||||||||||||||||| | ||| | ||||||||||||||||    
T  51352361 gttctcttgagaggttctctcgggttagaaaacatttgtaaacac 51352317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 51398752 - 51398886
Alignment:
Q  93 tcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtat 190  Q
    ||||| ||||||||| ||| |||||||| |||| ||||| ||||||||||||| |||| ||| | | | |||||||  ||||||| |||||||||||  |    
T  51398752 tcttgggttgggaaatatt-gtaaacaccttggatgagtgaaaatcattgagtgtcttgttcattg-atgagattggaaaaatgggtagaaattagggtt 51398849  T
Q  191 gttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |||||| | ||  ||||||| | ||||||||||||||    
T  51398850 gttcttagtgaacttgttgaagctaatttcttgtaac 51398886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 9e-30; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 13121689 - 13121842
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||| || ||||||    
T  13121689 gttctcttgagagcttctcttgggttgggaaacatttgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagactgggaaaat 13121787  T
Q  175 ggtagaaatta-ggtatgttcttggagagtttgttgatgttaatttcttgtaacc 228  Q
    ||||||||||| ||| ||||||| | ||| ||||||| | |||||||||||||||    
T  13121788 ggtagaaattagggtttgttctttgtgagcttgttgaagataatttcttgtaacc 13121842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 28671857 - 28671962
Alignment:
Q  83 tgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaa 182  Q
    ||||||||||| ||| |||||||||||||||||||  | |||| ||||| |||| |||||||||||| |||||||||||| ||||  ||||| |||||||    
T  28671857 tgagaggttcttttgggttgggaaacatttgtaaatgcattggatgagtgaaattattgagtctcttgttcttgggaagatattggaaaaattgtagaaa 28671956  T
Q  183 ttaggt 188  Q
    ||||||    
T  28671957 ttaggt 28671962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 227
Target Start/End: Original strand, 36773483 - 36773634
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| ||||||    
T  36773483 gttctcttgaggggttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaat 36773580  T
Q  175 -ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
     || | ||||||||  ||||||| | ||| ||||||| | ||||||||||||||    
T  36773581 gggaataaattagggttgttctttgtgagcttgttgaagctaatttcttgtaac 36773634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 11151825 - 11151679
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |||||||||||||||||| ||| | ||  || |||| |||||||| ||||||||||    
T  11151825 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtctcttgttcattggt-gaaattgggaaaatgggtagaaattag 11151728  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  11151727 atttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 11151679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 11690435 - 11690581
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| |  |  ||||||| |||||| ||||||||||||    
T  11690435 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttg-tgagattgggaaaatgggtagaaattag 11690532  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  11690533 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 11690581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 42020109 - 42019961
Alignment:
Q  87 aggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattag 186  Q
    ||||||||||| ||||  ||| |||||||||||   ||||||||| |||||||||||||| || ||||||||||||||||   |||| ||||||| |||     
T  42020109 aggttctcttgagttgataaatatttgtaaacatcgtgggtgagtgaaatcattgagtctatttttcttgggaagagattagaaaaagggtagaatttat 42020010  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || |||||||  | || |||| || | |||||||||||||| |||||||    
T  42020009 gtttgttcttataaagcttgtagaagctaatttcttgtaactcttttgt 42019961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 42362286 - 42362432
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| |  |  ||||||| |||||| ||||||||||||    
T  42362286 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttg-tgagattgggaaaatgggtagaaattag 42362383  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  42362384 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 42362432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 11049470 - 11049581
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    ||||| ||||||| |||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||| || || ||  ||||||  ||||||    
T  11049470 gttcttttgagagcttctcttgtgttgggaaacatttgtaaacaccttgggtaagtgaaaatcattgagtgtcttgttttttgg-tgagattaggaaaat 11049568  T
Q  175 ggtagaaattagg 187  Q
    |||| ||||||||    
T  11049569 ggtataaattagg 11049581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 42261676 - 42261574
Alignment:
Q  136 tcattgagtctcttcttcttg---ggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttt 232  Q
    |||||||||||||| ||| ||   ||| ||||||| |||||| |||||||||| || ||||||||||||| ||||||| | |||||||||||||| ||||    
T  42261676 tcattgagtctcttgttcatgaaaggaggagattgagaaaatcgtagaaattaagtttgttcttggagagcttgttgaagctaatttcttgtaactcttt 42261577  T
Q  233 tgt 235  Q
    |||    
T  42261576 tgt 42261574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 30218235 - 30218133
Alignment:
Q  133 aaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttt 232  Q
    |||||||||||| |||| ||| ||| | ||||||| ||||  ||||||| |||||| ||||||||||||| || |||| | ||||||||||||||| |||    
T  30218235 aaatcattgagtgtcttgttcatggaaggagattgagaaatgggtagaagttaggtttgttcttggagagcttattgaagctaatttcttgtaaccattt 30218136  T
Q  233 tgt 235  Q
    |||    
T  30218135 tgt 30218133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 229
Target Start/End: Complemental strand, 34140005 - 34139865
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| |  |  ||||||| |||||| ||||||||||||    
T  34140005 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttg-tgagattgagaaaatgggtagaaattag 34139908  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaaccc 229  Q
    |  ||||||| | ||| ||||| | | ||||||||||||||||    
T  34139907 ggttgttctttgtgagcttgtttaagctaatttcttgtaaccc 34139865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 24885595 - 24885741
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatg-gtagaaattag 186  Q
    |||||| || ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| |  | | | |||| ||||||| |||||||||||    
T  24885595 gttctcatgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtaaa-attgggaaaatgagtagaaattag 24885692  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  24885693 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 24885741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 29867803 - 29867949
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| ||||||||||||    
T  29867803 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaattag 29867900  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||  | | |||||||||||||||| |||||    
T  29867901 ggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgt 29867949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 7815517 - 7815361
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggta 178  Q
    |||||||||||||| ||| |||| ||||||||||||||||| || |||| || |||||||||| || |||| ||| | ||  ||||||| ||||| |||     
T  7815517 tcttgagaggttctattgggttgagaaacatttgtaaacaccttaggtgggtgaaaatcattgcgtgtcttgttcattgg-tgagattgagaaaaaggtt 7815419  T
Q  179 gaaatta-ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||| ||| |||||||    || ||||||| | |||||||||||||| |||||||    
T  7815418 gaaattagggtttgttctttagaagcttgttgaagctaatttcttgtaactcttttgt 7815361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 33162685 - 33162538
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaatta 185  Q
    |||||||||| ||||||||||||| |||||||| |||||||| | |||||||| |||| |||| ||| | ||  || |||  |||||||| |||||||||    
T  33162685 ggttctcttgagttgggaaacatt-gtaaacaccttgggtgattgaaaatcatcgagtgtcttgttcattggt-gaaattaggaaaatgggtagaaatta 33162588  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  33162587 gggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 33162538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 723978 - 723832
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||| ||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| |  |  |||||||  ||| ||| ||||||||||    
T  723978 gttcttttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgt-gagattggaaaactgggtagaaattag 723881  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  723880 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 723832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 38312174 - 38312320
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| ||| |||| ||| |||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  38312174 gttctcttgggttgggaaacatt-gtatacaccttgtgtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 38312271  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  |||||||   |||||||||||||||| |||||    
T  38312272 ggttgttctttgtgaacttgttgaaactaatttcttgtaacccatttgt 38312320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 5723488 - 5723344
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| |||||||||||||    
T  5723488 gttctcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgagaaaagggtagaaattagg 5723392  T
Q  188 tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
      ||||||| | ||  ||||  | | ||||||||||||||| ||||||    
T  5723391 cttgttctttgtgaacttgtcaaagctaatttcttgtaacctttttgt 5723344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 235
Target Start/End: Original strand, 30833284 - 30833425
Alignment:
Q  93 tcttgcgttgggaaacatttgtaaacactttgggtgagta-aaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatg 191  Q
    ||||| ||||||||||||| ||||||||||||| |||||  |||||||||||| |||| |||||||  |||    | ||||| |||||||||||||  ||    
T  30833284 tcttgggttgggaaacatt-gtaaacactttgg-tgagtgtaaatcattgagtgtcttgttcttggtgagattgggagaaaagggtagaaattagggttg 30833381  T
Q  192 ttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||| | ||  ||||  | ||||||||||||||||||||||||    
T  30833382 ttctttgtgaacttgtcaaagttaatttcttgtaacccttttgt 30833425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 4503366 - 4503220
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa--tggtagaaatta 185  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||| ||||||| |||||  ||||||||||||    
T  4503366 gttctcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattgga-gagattgggaaaaaatggtagaaatta 4503270  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||  ||||||| | ||  ||||  | | |||||||||||||| |||||||    
T  4503269 gggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgt 4503220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 39284819 - 39284879
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctctt 149  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| ||||    
T  39284819 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtatctt 39284879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 2334651 - 2334506
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| ||||||||| ||    
T  2334651 gttctcttgggttgggaaaca-ttgtaaacacctt-ggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaataag 2334555  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||| ||||| |||||||    
T  2334554 ggttgttctttgtgaacttgttgaagctaatttctagtaactcttttgt 2334506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 6595159 - 6595095
Alignment:
Q  170 aaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttg 234  Q
    ||||||||||||||||||  ||||||| | ||  ||||||| | |||||||||||||||||||||    
T  6595159 aaaatggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttg 6595095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 227
Target Start/End: Complemental strand, 17057603 - 17057465
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||| ||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||||||| ||||||||||    
T  17057603 gttctcttgggttgggaaatatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattag 17057506  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |  ||||||| |  || ||||||| | |||||| |||||||    
T  17057505 ggttgttctttgcaagcttgttgaagctaattttttgtaac 17057465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 227
Target Start/End: Complemental strand, 17085586 - 17085448
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||| ||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||||||| ||||||||||    
T  17085586 gttctcttgggttgggaaatatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattag 17085489  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |  ||||||| |  || ||||||| | |||||| |||||||    
T  17085488 ggttgttctttgcaagcttgttgaagctaattttttgtaac 17085448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 24398144 - 24398188
Alignment:
Q  252 ttgtaaataactctttgataatggattagagagatcaatctctcc 296  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  24398144 ttgtaaagaactcattgataatggattggagagatcaatctctcc 24398188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 33648147 - 33648251
Alignment:
Q  132 aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg-tatgttcttggagagtttgttgatgttaatttcttgtaaccct 230  Q
    ||||| ||||||| |||| | | || || ||||||| |||||||||| |||||||| | ||||||| | ||| ||||||| | ||||||| |||||||||    
T  33648147 aaaataattgagtgtcttgtacatgagaggagattgagaaaatggtaaaaattagggtttgttctttgtgagcttgttgaagctaatttcctgtaaccct 33648246  T
Q  231 tttgt 235  Q
    |||||    
T  33648247 tttgt 33648251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 36318239 - 36318097
Alignment:
Q  93 tcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtat 190  Q
    ||||| ||||||||| ||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||||||| |||||||||||  |    
T  36318239 tcttgggttgggaaatatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattagggtt 36318142  T
Q  191 gttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||| | ||| |||||||   |||||| ||||||||| |||||    
T  36318141 gttctttgtgagcttgttgaaactaatttattgtaacccatttgt 36318097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 4561026 - 4561100
Alignment:
Q  75 agttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttc 150  Q
    ||||||||||| ||||||| ||| || |||||| |||||||||||  || ||||||| ||||||| ||||||||||    
T  4561026 agttctcttgataggttcttttgggt-gggaaatatttgtaaacatgtttggtgagtgaaatcatcgagtctcttc 4561100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 11067226 - 11067299
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctctt 149  Q
    ||||||||||| | ||| |||  ||||||||||| |||||||||| |||||||||| ||||||||||||| ||||    
T  11067226 gttctcttgagggcttcgcttcggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtctt 11067299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 24397997 - 24398137
Alignment:
Q  99 gttgggaaacatttgtaaacac-tttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaa--aatggtagaaatta-ggtatgtt 193  Q
    ||||||||||| |||||||||| |||||  |||| ||||||| ||||| |||| ||| | ||  |||||||||||  || ||||||| ||| ||| ||||    
T  24397997 gttgggaaacaattgtaaacacctttggaagagtgaaaatcaatgagtgtcttgttcattggt-gagattgtgaagaaagggtagaagttaaggtttgtt 24398095  T
Q  194 cttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||| | ||| ||||||| | ||||||||||||||||||||||    
T  24398096 ctttgtgagcttgttgaagctaatttcttgtaacccttttgt 24398137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 5700347 - 5700271
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatg 175  Q
    |||| |||||||||||||||||||||||||| | |||| |||||||| |||| ||| | || |||||||| |||||||    
T  5700347 gttgagaaacatttgtaaacactttgggtgaatgaaaaacattgagtgtcttgttcattgg-agagattgagaaaatg 5700271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 14202641 - 14202586
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagt 144  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||| |||||||    
T  14202641 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaattattgagt 14202586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 26353204 - 26353264
Alignment:
Q  176 gtagaaatta-ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||||||| ||| ||||||| | ||||||||||| | |||||||||||||| |||||||    
T  26353204 gtagaaattaaggtttgttctttgtgagtttgttgaagctaatttcttgtaacacttttgt 26353264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 29867963 - 29867999
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||| |||||| |||||||||||||||||    
T  29867963 aactctttgatagtggattggagagatcaatctctcc 29867999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 33162524 - 33162488
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  33162524 aactcattgatagtggattagagagatcaatctctcc 33162488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 36205897 - 36205752
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa-tggtagaaattag 186  Q
    ||||||||| ||||||||||||  |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| |||||||||||||    
T  36205897 gttctcttgggttgggaaacatg-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaaatggtagaaattag 36205801  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||  | | |||||||||||||| |||||||    
T  36205800 ggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgt 36205752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 36773656 - 36773692
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||| |||||| |||||||||||||||||    
T  36773656 aactctttgatagtggattggagagatcaatctctcc 36773692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 35616129 - 35616249
Alignment:
Q  115 aaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgtt 214  Q
    |||||| |||||||||| ||||||||||||||||| |||  |||||||||||| ||||   ||||||||||||| ||||||||||||| | ||| | |||    
T  35616129 aaacaccttgggtgagtgaaatcattgagtctcttgttcacgggaagagattgagaaatgagtagaaattaggtttgttcttggagagctcgtttaagtt 35616228  T
Q  215 aatttcttgtaacccttttgt 235  Q
    |||||||||||||||||||||    
T  35616229 aatttcttgtaacccttttgt 35616249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 3325847 - 3325986
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggt 188  Q
    ||||||||| |||| ||||||||||||||||| |||||||||| ||| ||||| || |||| ||||| |||||| ||||  |||| |||||||||||| |    
T  3325847 gttctcttgagttgagaaacatttgtaaacaccttgggtgagtgaaaccattgggtatcttgttcttaggaagaaattgaaaaaaaggtagaaattagtt 3325946  T
Q  189 atgttcttggagagtttgttgatgttaatttcttgtaacc 228  Q
     |||||||| |||| ||||||| | |||||||||||||||    
T  3325947 ttgttcttgaagagcttgttgaagctaatttcttgtaacc 3325986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 13695939 - 13695779
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    |||||||||||||||| | ||| | ||| |||||||||||||||| ||| |||||| ||||||||||||| |||| ||||| || |||||||| |||||     
T  13695939 gttctcttgagaggttttattgagctggaaaacatttgtaaacaccttgtgtgagtgaaaatcattgagtatctttttctttgg-agagattgggaaaag 13695841  T
Q  175 ggtagaaatta-ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||| |||||| ||| ||||||| | ||| ||||| | | ||||||||||||||||||||||    
T  13695840 ggtacaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttgt 13695779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 316731 - 316842
Alignment:
Q  124 gggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttg 223  Q
    |||||||| ||||||||| ||||||| ||   ||||| |||||| ||||| |||||||||||||| ||||||||||||| ||||||| | ||||||||||    
T  316731 gggtgagtgaaatcattgggtctcttgtttaggggaaaagattgagaaaaaggtagaaattaggtttgttcttggagagcttgttgaagctaatttcttg 316830  T
Q  224 taacccttttgt 235  Q
    ||| ||||||||    
T  316831 taatccttttgt 316842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 222
Target Start/End: Original strand, 19806318 - 19806449
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattagg 187  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |||||||||||| |||| ||| | ||  |||||||  ||||| |||||||||||||    
T  19806318 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaatcattgagtgtcttgttcattgg-tgagattggaaaaatgggtagaaattagg 19806415  T
Q  188 tatgttcttggagagtttgttgatgttaatttctt 222  Q
    | ||||||| | ||||||||||| | |||||||||    
T  19806416 t-tgttctttgtgagtttgttgaagctaatttctt 19806449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 10055024 - 10054911
Alignment:
Q  115 aaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgtt 214  Q
    ||||| |||||||| || |||||||||||||| || ||| | | ||||||||| ||||  ||||||||||| || |||||||| |||||||||||| | |    
T  10055024 aaacattttgggtgggtgaaatcattgagtctattgttcatagaaagagattgagaaatgggtagaaattatgtttgttcttgaagagtttgttgaagct 10054925  T
Q  215 aatttcttgtaacc 228  Q
    |||||||| |||||    
T  10054924 aatttcttataacc 10054911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 9049580 - 9049530
Alignment:
Q  85 agaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaa 135  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  9049580 agaggttctcttgatttgggaaacatttgtaaacactttgggtgagtaaaa 9049530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 31182907 - 31183045
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||| |||| ||| |  |  ||||||| |||||| ||||||||||||    
T  31182907 gttctcttgggttgggaaaca-ttgtaaacaccttaggtgagtgaaaatcattgagtgtcttgttcatttg-tgagattg-gaaaatgggtagaaattag 31183003  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacc 228  Q
    |  ||||||| | ||||||||| | |||||||||||||||||    
T  31183004 gattgttctttgtgagtttgtttaagttaatttcttgtaacc 31183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 533703 - 533849
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |||||||||| || |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  533703 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgcgtgtcttgttcattggt-gagattgggaaaatgggtagaaattag 533800  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  || |||| | ||| ||||||| | |||||| ||||||||| |||||    
T  533801 ggttggtctttgtgagcttgttgaagctaattttttgtaacccatttgt 533849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 13488137 - 13488283
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||| ||||||| |||||||| |||||||||| ||||| ||||||| |||| ||| | || | |||||| |||||||| ||||||||||    
T  13488137 gttctcttgggttggaaaacatt-gtaaacaccttgggtgagtgaaaattattgagtgtcttgttcattggta-agattgggaaaatgggtagaaattag 13488234  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  13488235 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 13488283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 28750889 - 28750743
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| ||| |||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||| ||||||||||||    
T  28750889 gttctcttgggttgggaaaca-ttgaaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaattag 28750792  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  |||||||   ||  ||||||| ||||||||| |||||||| |||||    
T  28750791 ggttgttctttatgaaattgttgaagttaatttcctgtaacccatttgt 28750743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 33831614 - 33831760
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||| ||||||| |||||||| |||||||||| ||||||||||||| |||| ||| |  |  |||||||  ||||||| ||||||||||    
T  33831614 gttctcttgggttggaaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttattcatttgt-gagattggaaaaatgggtagaaattag 33831711  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    || ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  33831712 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 33831760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 39468783 - 39468637
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| ||| |||||| ||||||||||||| |||| ||| |  |  ||||||| |||||| ||||||||||||    
T  39468783 gttctcttgggttgggaaaca-ttgtaaacaccttgagtgagtgaaaatcattgagtgtcttgttcattag-tgagattgggaaaatgggtagaaattag 39468686  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  39468685 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 39468637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 25412696 - 25412840
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| |||||||||||||    
T  25412696 gttctcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaagggtagaaattagg 25412792  T
Q  188 tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
      ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  25412793 gttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 25412840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 22097879 - 22097940
Alignment:
Q  170 aaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaaccctt 231  Q
    |||| |||||||||||||  |||||||||||| |||||||| ||||||||||| ||||||||    
T  22097879 aaaagggtagaaattagggttgttcttggagaatttgttgaagttaatttcttataaccctt 22097940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 5887650 - 5887504
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||| | |||| ||| |  |  ||||||| |||||||| ||||||||||    
T  5887650 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcatttg-tgagattgagaaaatggatagaaattag 5887553  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||||||| | ||| ||||| | | |||||||||| ||||| |||||    
T  5887552 atttgttctttgtgagcttgtttaagctaatttcttgcaacccatttgt 5887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 42428664 - 42428518
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||| ||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| |||||||||     
T  42428664 gttctcttgggttgggaaatatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattat 42428567  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  | ||||| | ||  ||||||| | |||||||||||||||| |||||    
T  42428566 ggtttttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 42428518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 4160575 - 4160686
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttgg 198  Q
    |||| |||||| |||||||||| |||| ||||| |||||| ||| | | ||  || || || ||||||  |||||||||||||||||||| |||||||||    
T  4160575 gttgagaaacaattgtaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttgg 4160674  T
Q  199 agagtttgttga 210  Q
    |||  |||||||    
T  4160675 agaacttgttga 4160686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 213409 - 213545
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||||||    
T  213409 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctt 213506  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||| | | |||||||||||||||| |||||    
T  213507 tgtgagcttgttaaagctaatttcttgtaacccatttgt 213545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 28278260 - 28278396
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| ||||||||| |  |||||||    
T  28278260 gttgggaaacaattgtaaacacattgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattatggttgttctt 28278357  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||||||||||||| |||||    
T  28278358 tgtgagcttgttgaagctaatttcttgtaacccatttgt 28278396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 38746949 - 38747085
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| |   | ||||||| |||||||| |||||||||||  |||||||    
T  38746949 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtatcttgttcatta-atgagattgggaaaatgggtagaaattagggttgttctt 38747046  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||||||||||||| |||||    
T  38747047 tgtgagcttgttgaagctaatttcttgtaacccatttgt 38747085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 42426458 - 42426323
Alignment:
Q  100 ttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttcttg 197  Q
    |||||||||||| |||||||| |||||||||| ||||| ||||||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||||||     
T  42426458 ttgggaaacatt-gtaaacaccttgggtgagtgaaaattattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttcttt 42426361  T
Q  198 gagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | ||  ||||||| | |||||||||| ||||| |||||    
T  42426360 gtgaaattgttgaagctaatttcttgcaacccatttgt 42426323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 5007481 - 5007621
Alignment:
Q  86 gaggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaatta 185  Q
    |||||||||||| ||||  | | |||||||||||| || ||||||| ||| | |||||||| || || || ||||| || ||| |||| | |||||||||    
T  5007481 gaggttctcttgagttgaaacatatttgtaaacaccttaggtgagtgaaagctttgagtctattgttattcggaagtgaatgttaaaaggatagaaatta 5007580  T
Q  186 gg-tatgttcttggagagtttgttgatgttaatttcttgta 225  Q
    || | | ||||||||||| ||||| | | ||||||||||||    
T  5007581 ggttttattcttggagagcttgttaaagctaatttcttgta 5007621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 13239686 - 13239831
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagatt-gtgaaaatggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||| |||| ||| | ||  |||||| |  |||||||||||||||||    
T  13239686 gttctcttgggttgggaaaca-ttgtaaacacctt-ggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattggaaaaaatggtagaaattag 13239782  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  | ||||| | ||  ||||||| | |||||||||||||| |||||||    
T  13239783 ggtttttctttgtgaacttgttgaagctaatttcttgtaactcttttgt 13239831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 32609572 - 32609615
Alignment:
Q  192 ttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||    
T  32609572 ttctttgagagtttgttgaagttaatttcttgtaactcttttgt 32609615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 42926827 - 42926893
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttctt 155  Q
    |||||||||  |||||||||||| |||||||| |||||||||| ||||||||||||| |||| |||||    
T  42926827 gttctcttggattgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttctt 42926893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 233
Target Start/End: Original strand, 30182523 - 30182666
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa-tggtagaaattag 186  Q
    ||||||||| ||||||||||||| | |||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| |||||||||||||    
T  30182523 gttctcttgggttgggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaaatggtagaaattag 30182619  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaaccctttt 233  Q
    |  ||||||| | ||  ||||  | | ||||||||||||||||||||    
T  30182620 ggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 30182666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 5007446 - 5007479
Alignment:
Q  11 caaaggagataactttagggttgagtatctttgg 44  Q
    |||||||| |||||||||||||||||||||||||    
T  5007446 caaaggaggtaactttagggttgagtatctttgg 5007479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 10700857 - 10700761
Alignment:
Q  115 aaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttga 210  Q
    |||||| ||||||| || ||||||||||||| | || ||| ||  || ||||||  |||| |||||||||||||| ||||||| ||||| |||||||    
T  10700857 aaacaccttgggtgcgtgaaaatcattgagtattttgttcatgaaaatagattggaaaaaaggtagaaattaggtttgttcttagagagcttgttga 10700761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 32636918 - 32636954
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||| |||||| |||||||||||||||||    
T  32636918 aactctttgatagtggattggagagatcaatctctcc 32636954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 37439065 - 37439127
Alignment:
Q  86 gaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctctt 149  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||    
T  37439065 gagggtctcttgggttgggaaaca-ttgtaaacacttt-ggtgagtgaaaatcattgagtgtctt 37439127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 39468623 - 39468587
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  39468623 aactcattgatagtggattagagagatcaatctctcc 39468587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 28265801 - 28265642
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat 174  Q
    ||||||||||| |||||||||  ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| ||||||    
T  28265801 gttctcttgaggggttctcttaggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggc-gagattgggaaaat 28265704  T
Q  175 -ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     |||||||||||||  ||||| | | ||| ||||||| | |||||||||||||||| |||||    
T  28265703 aggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgt 28265642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 93 - 236
Target Start/End: Complemental strand, 1050674 - 1050531
Alignment:
Q  93 tcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgt 192  Q
    ||||| ||||||||||||||||| |||| |||  ||||| |||| |||||||||||| ||| || |||||||||| ||||  |||  ||||||||| |||    
T  1050674 tcttgggttgggaaacatttgtacacacattgaatgagtgaaattattgagtctcttgttcatgtgaagagattgggaaatgggtgaaaattaggtgtgt 1050575  T
Q  193 tcttggagagtttgttgatgttaatttcttgtaacccttttgtg 236  Q
    |||| ||||| || |||| | ||||||||||||||  |||||||    
T  1050574 tcttcgagagcttattgaagctaatttcttgtaacatttttgtg 1050531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 12318722 - 12318611
Alignment:
Q  124 gggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttg 223  Q
    |||||||| |||||||||||| |||| ||| |||| |||||||  ||||  |||||||||||||| ||||| ||||||| ||||||| | ||||||||||    
T  12318722 gggtgagtgaaatcattgagtttcttgttcatgggtagagatttggaaatgggtagaaattaggtttgttcatggagagcttgttgaagctaatttcttg 12318623  T
Q  224 taacccttttgt 235  Q
    ||||| ||||||    
T  12318622 taaccattttgt 12318611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 234
Target Start/End: Complemental strand, 928211 - 928065
Alignment:
Q  90 ttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagatt-gtgaaaatggtagaaatta-g 186  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||||| ||||| |||| ||||| ||  || ||| |  |||||| ||||||||| |    
T  928211 ttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcaatgagtgtcttgttctttgg-tgatattggaaaaaatgatagaaattagg 928113  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttg 234  Q
    || ||||||| | ||| ||||||| | |||||||||||||||||||||    
T  928112 gtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttg 928065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 4552874 - 4552725
Alignment:
Q  86 gaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaat 183  Q
    |||||||||||| |||| |||||||| |||||||| |||||||||  ||||||||||||| |||| ||| | ||  ||||||| |||||||| |||||||    
T  4552874 gaggttctcttgggttgagaaacatt-gtaaacaccttgggtgagggaaaatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaat 4552777  T
Q  184 taggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||| ||| ||| | ||| ||||||| | |||||||||||||||| |||||    
T  4552776 taggtttgtcctttgtgagcttgttgaagctaatttcttgtaacccctttgt 4552725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 50167422 - 50167263
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa- 173  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||     
T  50167422 gttctcttgaggggttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgggaaaat 50167325  T
Q  174 tggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | ||||||||||||  |||| || | ||| ||||  | | |||||||||||||||| |||||    
T  50167324 tagtagaaattagggttgttatttgtgagcttgtcaaagctaatttcttgtaacccatttgt 50167263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 227
Target Start/End: Complemental strand, 197142 - 197004
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa-tggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| |  |  ||||||| ||||| |||||||||||||    
T  197142 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttg-tgagattgagaaaattggtagaaattag 197045  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |  ||||||| | ||| ||||| | ||||||||||||||||    
T  197044 ggttgttctttgtgagcttgtttaagttaatttcttgtaac 197004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 31659172 - 31659318
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||| ||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||||||| ||||||||||    
T  31659172 gttctcttgggttcggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattag 31659269  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  31659270 ggctgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 31659318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 9109610 - 9109508
Alignment:
Q  133 aaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttt 232  Q
    ||||| |||||| |||| ||| ||| | ||||||| |||||||| |||||||| || | | ||||||||  ||||||| |||||||||||||||||||||    
T  9109610 aaatccttgagtgtcttgttcatggtaggagattgagaaaatggaagaaattaagtttttacttggagaacttgttgaagttaatttcttgtaacccttt 9109511  T
Q  233 tgt 235  Q
    |||    
T  9109510 tgt 9109508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 25652029 - 25652158
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttg 197  Q
    ||||||||||| |||||||||| ||  ||| || ||||||||||||| | || ||| || ||| | |||| |||| |||||||||||| || |||| ||     
T  25652029 gttgggaaacaattgtaaacaccttaagtgtgtgaaaatcattgagtattttgttcatgagaaaatattgagaaattggtagaaattaagtgtgttattt 25652128  T
Q  198 gagagtttgttgatgttaatttcttgtaac 227  Q
    ||||||||||||| | ||||||||||||||    
T  25652129 gagagtttgttgaagctaatttcttgtaac 25652158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 41135763 - 41135900
Alignment:
Q  99 gttgggaaacatttgtaaa-cactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttg 197  Q
    |||| |||||||||| ||| ||| |||||||||  ||||||||||||||||| ||| || || |||| |   |||| |||||||||||| | ||||||||    
T  41135763 gttgagaaacatttgaaaaacaccttgggtgagggaaatcattgagtctcttgttcctgtgaggagaatagaaaaagggtagaaattagatttgttcttg 41135862  T
Q  198 gagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     |||  || |||| ||||||||||||||| ||||||||    
T  41135863 aagaactttttgaagttaatttcttgtaaaccttttgt 41135900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 834401 - 834255
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| ||||||| || ||||||||||||| |||| ||| |  |  ||||||| |||||||| ||||||||||    
T  834401 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgcgtgaaaatcattgagtgtcttgttcatttg-tgagattgggaaaatggatagaaattag 834304  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  834303 ggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 834255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 233
Target Start/End: Complemental strand, 2263214 - 2263065
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    |||||||||| ||| ||||| |||||||||||  ||||  |||| |||||||||||||| ||  |||| | ||||||||| ||||| |||||||| || |    
T  2263214 ggttctcttgagttaggaaatatttgtaaacatcttggtcgagtgaaatcattgagtcttttgctctttgaaagagattgggaaaaaggtagaaagtaag 2263115  T
Q  188 ----tatgttcttggagagtttgttgatgttaatttcttgtaaccctttt 233  Q
        | | ||||||| ||| ||||||| | ||||||||||||||||||||    
T  2263114 ttttttttttcttggtgagcttgttgaagataatttcttgtaaccctttt 2263065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 3847355 - 3847209
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| |  |  ||||||| |||||| ||||||||||||    
T  3847355 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttg-tgagattgggaaaatgggtagaaattag 3847258  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||||||||| | | ||| || ||||||||| |||||    
T  3847257 ggttgttctttgtgagtttgtttaagctaaatttttgtaacccatttgt 3847209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 4535688 - 4535577
Alignment:
Q  115 aaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgtt 214  Q
    |||||| |||||||||| ||||||||||| ||||| |||   | ||||||||| | || |||||||||||| || ||||||||||||| || |||| ||     
T  4535688 aaacacattgggtgagtgaaatcattgag-ctcttgttcaaagtaagagattgcggaattggtagaaattaagtttgttcttggagagcttattgaagtc 4535590  T
Q  215 aatttcttgtaac 227  Q
    |||||||||||||    
T  4535589 aatttcttgtaac 4535577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 10925157 - 10925295
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||||||| |||||||||     
T  10925157 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattgaaaaaatggatagaaattat 10925254  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |  ||||||| | ||| ||||||| | ||||||||||||||    
T  10925255 ggttgttctttgtgagcttgttgaagctaatttcttgtaac 10925295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 15820241 - 15820379
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||||| ||  || ||||  || || |||| |||||||    
T  15820241 gttctcttgagttgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttctttgg-tgatattggaaagatgggtaaaaattag 15820338  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    || ||||||| | ||| ||||||| | ||||||||||||||    
T  15820339 gtttgttctttgtgagcttgttgaagctaatttcttgtaac 15820379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 226
Target Start/End: Complemental strand, 44650399 - 44650260
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaatta- 185  Q
    |||||||||  ||||| ||||||||||||||||||||||||||| ||||| ||||||| |||| ||| | || |||||||| |||||  ||| ||||||     
T  44650399 ggttctcttaagttggaaaacatttgtaaacactttgggtgagtgaaaattattgagtgtcttgttcattgg-agagattgagaaaaatgtaaaaattat 44650301  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaa 226  Q
    ||| ||||||| | ||||||||| | | |||||| ||||||    
T  44650300 ggtttgttctttgtgagtttgttaacgctaatttattgtaa 44650260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 49918283 - 49918430
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    |||||||||  ||||||||||||   |||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  49918283 gttctcttggattgggaaacattataaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattag 49918381  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  49918382 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 49918430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 777164 - 777218
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt 131  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  777164 gttctcttgaggggttctcttgggttgggaaaca-ttgtaaacactttgggtgagt 777218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 11348642 - 11348778
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||| |||||||||||||  |||||||    
T  11348642 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaattggtagaaattagggttgttctt 11348739  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||||||||||||| |||||    
T  11348740 tgtgagcttgttgaagctaatttcttgtaacccatttgt 11348778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 22079307 - 22079396
Alignment:
Q  146 tcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||| ||| |||||||||||||  |||||||||||||||| || ||||||| | ||| ||||| | | ||||||||||||||| ||||||    
T  22079307 tcttgttcatgggaagagattggaaaaatggtagaaattatgtttgttctttgtgagcttgttaaagctaatttcttgtaaccattttgt 22079396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 6808389 - 6808532
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaa------attaggtatg 191  Q
    |||| |||||||| | |||||||||||| |||| ||||| ||||||| |||| ||| || | |||||||  | |||||||||||      ||||||| ||    
T  6808389 gttgagaaacattgggaaacactttgggagagtgaaaattattgagtgtcttgttcatgagtagagattagggaaatggtagaaattaggattaggtttg 6808488  T
Q  192 ttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||||| ||||||| | ||| |||||||||| |||||||    
T  6808489 ttcttggagagcttgttgaagctaacttcttgtaactcttttgt 6808532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 13138209 - 13138065
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaatta 185  Q
    |||||||||| | ||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||||||| |||||||||    
T  13138209 ggttctcttggggtgggaaaca-ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattgg-tgagattg-aaaaatggatagaaatta 13138113  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttg 234  Q
    |||  |||||| | ||| ||||||| | |||||||||||||||| ||||    
T  13138112 ggt-cgttctttgtgagcttgttgaagctaatttcttgtaacccatttg 13138065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 28220460 - 28220314
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| |||||||| |||| | |||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||  |||||||| ||||||||||    
T  28220460 gttctcttgggttgggaagcatt-gaaaacaccttgggtgagtgaaaatcattgagtgtcttattcattggt-gagattcggaaaatgggtagaaattag 28220363  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  28220362 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 28220314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 37879135 - 37879006
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||| |||||||||||||  |||||||    
T  37879135 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaataggtagaaattagggttgttctt 37879038  T
Q  197 ggagagtttgttgatgttaatttcttgtaacc 228  Q
     | ||| ||||||| | |||||||||||||||    
T  37879037 tgtgagcttgttgaagctaatttcttgtaacc 37879006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 43342490 - 43342424
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttctt 155  Q
    ||||||||  |||||||||||||| || |||||||||||| || |||||||| |||||||| |||||    
T  43342490 gttctcttcggttgggaaacatttctatacactttgggtgggtgaaatcatttagtctcttgttctt 43342424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 13547312 - 13547177
Alignment:
Q  100 ttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttcttg 197  Q
    |||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||||||     
T  13547312 ttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttcttt 13547215  T
Q  198 gagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | ||| ||||||| | || ||||||||||||| |||||    
T  13547214 gtgagcttgttgaagctattttcttgtaacccatttgt 13547177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 37033297 - 37033170
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||||||    
T  37033297 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctt 37033200  T
Q  197 ggagagtttgttgatgttaatttcttgtaa 226  Q
     | ||| ||||||| | |||||||||||||    
T  37033199 tgtgagcttgttgaagctaatttcttgtaa 37033170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 41360859 - 41360994
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttcttg 197  Q
    ||||||||||||  |||||||  |||||||||| |||  ||||||| |||| ||| | ||  ||||||| |||||||| |||||||||||| |||||||     
T  41360859 gttgggaaacatc-gtaaacatcttgggtgagtgaaaatattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggtttgttcttt 41360956  T
Q  198 gagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    | ||| |||||||   |||||||||||||||| |||||    
T  41360957 gtgagcttgttgaaactaatttcttgtaacccatttgt 41360994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 3156800 - 3156945
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||| ||||||||| ||||||||  ||| ||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  3156800 gttctcttgggtttggaaacatt-gtaaacaccctgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattag 3156896  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||  ||||||| | |||||||||||||||| |||||    
T  3156897 ggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgt 3156945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 16914355 - 16914263
Alignment:
Q  144 tctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaa-tttcttgtaacccttttgt 235  Q
    |||||| ||| ||||||||||||| ||||  |||| |||||| || |||||||||||||  |||||| | ||| |||||| ||||||||||||    
T  16914355 tctcttgttcatgggaagagattgggaaatgggtaaaaattatgtttgttcttggagagcctgttgaagctaagtttcttctaacccttttgt 16914263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 44455098 - 44455232
Alignment:
Q  93 tcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtat 190  Q
    ||||| ||||||||||||| |||||||| |||||||||| |||| |||||||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |    
T  44455098 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaaccattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggtt 44455195  T
Q  191 gttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    |||||| | ||  |||||||   ||||||||||||||    
T  44455196 gttctttgtgaacttgttgaaactaatttcttgtaac 44455232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 8871203 - 8871136
Alignment:
Q  169 gaaaatggtagaaattagg-tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||||||||||||| | ||||||| | ||||| ||||| | ||||||||||||||| ||||||    
T  8871203 gaaaatggtagaaattagggtttgttctttgtgagttcgttgaagctaatttcttgtaaccattttgt 8871136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Original strand, 11031301 - 11031336
Alignment:
Q  85 agaggttctcttgcgttgggaaacatttgtaaacac 120  Q
    ||||||||||||| ||||||||||||||||||||||    
T  11031301 agaggttctcttgggttgggaaacatttgtaaacac 11031336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 36683695 - 36683762
Alignment:
Q  161 gagattgtgaaaat-ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    ||||||| |||||| |||||||||||||| | ||||| | ||||||||||| | ||||||||||||||    
T  36683695 gagattgggaaaataggtagaaattaggtttattctttgtgagtttgttgaagctaatttcttgtaac 36683762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 37503767 - 37503649
Alignment:
Q  111 ttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttcttggagagtttgtt 208  Q
    |||||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| || ||||||||  ||||||| | ||  |||||    
T  37503767 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatgggtaaaaattagggttgttctttgtgaacttgtt 37503669  T
Q  209 gatgttaatttcttgtaacc 228  Q
    || | |||||||||||||||    
T  37503668 gaagctaatttcttgtaacc 37503649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 29136191 - 29136327
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    |||| |||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||||||    
T  29136191 gttgtgaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctt 29136288  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||||||| ||||| |||||    
T  29136289 tgtgagcttgttgaagctaatttcttggaacccatttgt 29136327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 13938126 - 13938182
Alignment:
Q  144 tctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggaga 201  Q
    |||||| ||| ||||||||||||| ||||  |||||||||||||| ||||||||||||    
T  13938126 tctcttgttcgtgggaagagattgggaaatgggtagaaattaggt-tgttcttggaga 13938182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 23555499 - 23555392
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattag 186  Q
    ||||||||| ||||||||||| |||||||||| |||||||| | ||||| ||||||| |||| ||||| ||  |||||||  ||||| ||||||||||||    
T  23555499 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgaatgaaaattattgagtgtcttattctttgg-tgagattggaaaaatgggtagaaattag 23555402  T
Q  187 gtatgttctt 196  Q
    |  |||||||    
T  23555401 ggttgttctt 23555392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 50169445 - 50169306
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaatta 185  Q
    |||| ||||| ||||||||||||| ||||| || |||||||||| ||||||||||||| |||| ||| | ||  |||||||  ||||||| |||||||||    
T  50169445 ggttatcttgggttgggaaacatt-gtaaataccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaatta 50169348  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    ||  ||||||| | ||| ||||  | | ||||||||||||||    
T  50169347 gggttgttctttgtgagcttgtcaaagctaatttcttgtaac 50169306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 2926523 - 2926587
Alignment:
Q  170 aaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttg 234  Q
    ||||||||||||||||||| ||| |||| |||  ||||| | |||||||| |||||||| |||||    
T  2926523 aaaatggtagaaattaggtttgtgcttgaagaacttgttaaagttaatttattgtaacctttttg 2926587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 4552711 - 4552675
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  4552711 aactcattgataatggattggagagatcaatctctcc 4552675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 28265628 - 28265592
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||| |||||| |||||||||||||||||    
T  28265628 aactctttgatagtggattggagagatcaatctctcc 28265592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 30476682 - 30476627
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagt 144  Q
    ||||||||| ||||||||||| |||||||||| ||||||| || |||||||||||||    
T  30476682 gttctcttgggttgggaaaca-ttgtaaacaccttgggtgggtgaaaatcattgagt 30476627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 31925855 - 31925795
Alignment:
Q  175 ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||||||| |||||| | | ||| ||||||| | |||||||||||||||| |||||    
T  31925855 ggtagaaattagggatgttcattgtgagcttgttgaagctaatttcttgtaacccatttgt 31925795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 229
Target Start/End: Original strand, 37168241 - 37168371
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||| | |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||||||    
T  37168241 gttgggaaacaattgtaaacaccttgagagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctt 37168338  T
Q  197 ggagagtttgttgatgttaatttcttgtaaccc 229  Q
     | ||| ||||| | | ||||||||||||||||    
T  37168339 tgtgagcttgtttaagctaatttcttgtaaccc 37168371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 229
Target Start/End: Original strand, 47115115 - 47115245
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaat-ggtagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||  ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||| |||||||||||||  |||||||    
T  47115115 gttgggaaacaattgtaaacatcttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaattggtagaaattagggttgttctt 47115212  T
Q  197 ggagagtttgttgatgttaatttcttgtaaccc 229  Q
     | ||| ||||| | | ||||||||||||||||    
T  47115213 tgtgagcttgtttaagctaatttcttgtaaccc 47115245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 47255488 - 47255428
Alignment:
Q  175 ggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |||||||||||||  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  47255488 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 47255428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 226
Target Start/End: Original strand, 4045355 - 4045494
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaatta- 185  Q
    |||||||||| |||||||||||||||||||||| | |||||||| ||||||||||||| |||| ||  | || |||||||| |||||||||||||||||     
T  4045355 ggttctcttgagttgggaaacatttgtaaacacctagggtgagtgaaaatcattgagtgtcttgtttattgg-agagattgggaaaatggtagaaattag 4045453  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaa 226  Q
    ||| |||||||   ||| ||||||| | |||||||||||||    
T  4045454 ggtttgttctttatgagcttgttgaagctaatttcttgtaa 4045494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 9183265 - 9183119
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    |||||| || ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||| ||||||||||    
T  9183265 gttctcctgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattag 9183168  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | || |||||||| | |||||||||||||||| |||||    
T  9183167 ggttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgt 9183119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 3039146 - 3038991
Alignment:
Q  80 tcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa-tggt 177  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||| |||||| ||||||||||| | |||| ||| | ||  ||||||| ||||| ||||    
T  3039146 tcttgagaggttctcttgggttgggaaaca-ttgtaaacaccttgagtgagtgaaaatcattgaatgtcttgttcattgg-tgagattgggaaaattggt 3039049  T
Q  178 agaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||||||  ||||| | | ||| || |||| | |||||||||||||||| |||||    
T  3039048 agaaattagggttgttcattgtgagctttttgaagctaatttcttgtaacccatttgt 3038991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 28137642 - 28137496
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattag 186  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||| | ||  |||| || |||||||| ||||||||||    
T  28137642 gttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggt-gagaatgggaaaatgggtagaaattag 28137545  T
Q  187 gtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    |  ||||||| | ||| ||||| | | |||||||||||||||| |||||    
T  28137544 ggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgt 28137496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 25073535 - 25073648
Alignment:
Q  122 ttgggtgagtaaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttct 221  Q
    |||||||||| |||||||||||| |||| ||| ||||| |||||||  ||||||||||||||||| | | ||||| | ||| ||||| | | || ||| |    
T  25073535 ttgggtgagtgaaatcattgagtatcttgttcatgggaggagattgaaaaaatggtagaaattagatttattcttcgtgagcttgttaaagctattttat 25073634  T
Q  222 tgtaacccttttgt 235  Q
    ||||||||||||||    
T  25073635 tgtaacccttttgt 25073648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 5406432 - 5406288
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||| | ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||||||||||||||    
T  5406432 gttctctcgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatggtagaaattagg 5406336  T
Q  188 tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
      ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  5406335 gttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 5406288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 5410757 - 5410613
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||| | ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| |||||||||||||||||||    
T  5410757 gttctctcgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaatggtagaaattagg 5410661  T
Q  188 tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
      ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  5410660 gttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 5410613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 21593608 - 21593744
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatgg-tagaaattaggtatgttctt 196  Q
    ||||||||||| |||||||||| ||||| |||| |||||||| |||| |||| ||| | ||  ||||||| |||||||| |||||||||||  |||||||    
T  21593608 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat-gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctt 21593705  T
Q  197 ggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
     | ||| ||||||| | |||||||||||||||| |||||    
T  21593706 tgtgagcttgttgaagctaatttcttgtaacccatttgt 21593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 2973102 - 2973027
Alignment:
Q  161 gagattgtgaaaatgg-tagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||| |||||||| |||||||||||| ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  2973102 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 2973027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 5413626 - 5413482
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||| | ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| |||||||||||||    
T  5413626 gttctctcgggttgggaaacatt-gtaaacacattgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaaaggtagaaattagg 5413530  T
Q  188 tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
      ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  5413529 gttgttctttgcgaacttgtcaaagctaatttcttgtaacccttttgt 5413482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 31404907 - 31404763
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattagg 187  Q
    ||||||||| ||||| ||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| |  |  ||||||| |||||||||||||||||||    
T  31404907 gttctcttgggttggaaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcatcagt-gagattgggaaaatggtagaaattagg 31404811  T
Q  188 tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
      ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  31404810 gttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 31404763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 2171768 - 2171622
Alignment:
Q  85 agaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtgaaaa-tggtagaaa 182  Q
    |||| |||||||| ||||||||||||| |||||||| |||| ||||| ||||||||||||| |||| ||| | ||  ||||||| ||||| |||||||||    
T  2171768 agagtttctcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcattggt-gagattgggaaaaatggtagaaa 2171672  T
Q  183 ttaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttt 232  Q
    |||||  ||||||| | ||  ||||  | | |||||||||||||||||||    
T  2171671 ttagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttt 2171622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 5043632 - 5043699
Alignment:
Q  161 gagattgtgaaaatg-gtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaac 227  Q
    ||||||| ||||||| ||||||||||||| ||||||| | ||| ||||||| | ||||||||||||||    
T  5043632 gagattgagaaaatgagtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaac 5043699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 17758028 - 17758103
Alignment:
Q  161 gagattgtgaaaatgg-tagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||| |||||||| |||||||||||  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  17758028 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 17758103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 21588936 - 21589011
Alignment:
Q  161 gagattgtgaaaatgg-tagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||||| |||||||| |||||||||||  ||||||| | ||| ||||||| | |||||||||||||||| |||||    
T  21588936 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgt 21589011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 186729 - 186775
Alignment:
Q  170 aaaatggtagaaattaggtatgttcttggagagtttgttgatgttaa 216  Q
    |||||||||||||| |||| ||||||||||||| ||||||| |||||    
T  186729 aaaatggtagaaataaggtttgttcttggagagcttgttgaagttaa 186775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 22615914 - 22615964
Alignment:
Q  99 gttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctctt 149  Q
    |||| |||||||||||||| |  |||||||||| |||||||||||||||||    
T  22615914 gttgtgaaacatttgtaaatatcttgggtgagtgaaatcattgagtctctt 22615964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 24435763 - 24435795
Alignment:
Q  11 caaaggagataactttagggttgagtatctttg 43  Q
    |||||||||||||||||||||||||| ||||||    
T  24435763 caaaggagataactttagggttgagtgtctttg 24435795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 490511 - 490409
Alignment:
Q  136 tcattgagtctcttcttcttg---ggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttt 232  Q
    |||||||||||||| ||| ||   ||| ||||||| |||||| |||||||||| || ||||||||||||| ||||||| | |||||||||||||| ||||    
T  490511 tcattgagtctcttgttcatgaaaggaggagattgagaaaatcgtagaaattaagtttgttcttggagagcttgttgaagctaatttcttgtaactcttt 490412  T
Q  233 tgt 235  Q
    |||    
T  490411 tgt 490409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 235
Target Start/End: Original strand, 24990 - 25133
Alignment:
Q  93 tcttgcgttgggaaacatttgtaaacactttgggtgagtaaaatcattgagtctcttcttcttgggaagagatt-gtgaaaatggtagaaattaggtatg 191  Q
    ||||| ||| ||||||| |||||||||| ||||| |||| |||||||||||||| ||  ||    ||  ||||| | |||||||||||||| ||| | ||    
T  24990 tcttgggtttggaaacaattgtaaacaccttgggagagtgaaatcattgagtctgttgatcacatgacaagattcgggaaaatggtagaaactagttttg 25089  T
Q  192 ttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||||| ||||||||||||| | ||||||||||||||| ||||||    
T  25090 ttctttgagagtttgttgaaggtaatttcttgtaacctttttgt 25133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 1585 - 1483
Alignment:
Q  133 aaatcattgagtctcttcttcttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttt 232  Q
    |||| |||||||  ||| ||| |||||||||||||||||| ||||| ||||||||| |||||| || ||| ||| ||| ||| |||| ||| ||||||||    
T  1585 aaataattgagttacttgttcatgggaagagattgtgaaattggtaaaaattaggtttgttctgggtgagcttggtgaagttgattttttgcaacccttt 1486  T
Q  233 tgt 235  Q
    |||    
T  1485 tgt 1483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 19174 - 19118
Alignment:
Q  88 ggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagt 144  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  19174 ggttctcttgggttgggaaacatttgtaaacac-ttgggtgagtgaaaatcattgagt 19118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 851 - 996
Alignment:
Q  89 gttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctcttcttcttgggaagagattgtg--aaaatggtagaaatta 185  Q
    ||||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||| |||| |||||||   ||||||| |  |||| |||||||||||    
T  851 gttctcttgggttgggaaaca-ttgtaaacacctt-ggtgagtgaaaatcattgagtgtcttgttcttgg--tgagattgggaaaaaagggtagaaatta 946  T
Q  186 ggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgt 235  Q
    ||  ||||||| | ||  ||||  | | ||||||||||||||||||||||    
T  947 gggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgt 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 114524 - 114596
Alignment:
Q  76 gttctcttgagaggttctcttgcgttgggaaacatttgtaaacactttgggtgagt-aaaatcattgagtctctt 149  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||| ||||    
T  114524 gttctcttgaggggttctcttgggttgggaaaca-ttgtaaacacctt-ggtgagtgaaaatcattgagtgtctt 114596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 20489 - 20453
Alignment:
Q  260 aactctttgataatggattagagagatcaatctctcc 296  Q
    |||||||||||| |||||| |||||||||||||||||    
T  20489 aactctttgatattggattggagagatcaatctctcc 20453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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