View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10698_low_28 (Length: 271)
Name: NF10698_low_28
Description: NF10698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10698_low_28 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 271
Target Start/End: Complemental strand, 32378651 - 32378398
Alignment:
| Q |
18 |
ataaggttgcgtccgaaatagagtacaaatacaacctttcatagtacaattgttagtaactaaaatcaatgagaactttagagtcacactgagatgggag |
117 |
Q |
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| T |
32378651 |
ataaggttgcgtccgaaatagagtacaaatacaacctttcatagtacaattgttagtaactaaaatcaatgagaactttagagtcacactgagatgggag |
32378552 |
T |
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| Q |
118 |
acaccttccttccaagccatgtccatgccaatatacattcttcatatttcttcttggagagctttattggttccgatcttgtggctattatctttatcca |
217 |
Q |
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| T |
32378551 |
acaccttccttccaagccatgtccatgctaatatacattcttcatatttcttcttggagagctttattggttccgatcttgtggctattatctttatcca |
32378452 |
T |
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| Q |
218 |
tcttccgtctaaatcactaagtgtttgtcttagcggtaagatatatactaacgc |
271 |
Q |
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| T |
32378451 |
tcttccgtctaaatcactaagtgtttgtcttagcggtaagatttatactaacgc |
32378398 |
T |
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