View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10698_low_31 (Length: 259)
Name: NF10698_low_31
Description: NF10698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10698_low_31 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 5219756 - 5219994
Alignment:
| Q |
18 |
tcagataggaaagatttcaagcaaccttagccccattaaatcctgagattctctcatctatggagctggtgttctacttgaatttatgtcccagtcaaat |
117 |
Q |
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| T |
5219756 |
tcagataggaaagatttcaagcaaccttagccccattaaatcctgagattctctcatctatggaactggtgttctacttgaatttatatcccagtcaaat |
5219855 |
T |
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| Q |
118 |
atctgtgtacatcgaaagttttagttagttttcatgtttctcattattctttaaagctagagagagagtactctggtgtgttcatggtggtcactctgta |
217 |
Q |
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| T |
5219856 |
atctgtgtacatcgaaagttttagttagttttcatgtttctcattattctttaaagctagagagagagtactctggtgtgttcatggtggtcactctgta |
5219955 |
T |
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| Q |
218 |
catatatttctcacatgtatatctcctatgctactccac |
256 |
Q |
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| T |
5219956 |
catatatttctcacatgtatatatcccaggctattccac |
5219994 |
T |
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