View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10698_low_41 (Length: 248)
Name: NF10698_low_41
Description: NF10698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10698_low_41 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 5279743 - 5279990
Alignment:
| Q |
1 |
acaacattaattaaattaaattaaaccattaacaactttggaccatctctttccaagtctccgatccacatgtggtgcacatcacaaggaaggacaattc |
100 |
Q |
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| T |
5279743 |
acaacattaattaaattaaattaaagcattaacaactttggaccatctctttcgaagcctccgatccacatgcggtgcacatgacaaggaaggacaatta |
5279842 |
T |
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| Q |
101 |
cttcgtttatttaattgtgaggaacataagctaaggtttgactaatgaaatttgtgtgatcttaacaatttgaaatccccgtggtcggtcattttgttgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5279843 |
cttcgtttatttaattgtgaggaacataagctaaggtttgactaatgaaatttgtgtgatcttaacaatttgaaatccccgtggtcggtcattttgttgg |
5279942 |
T |
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| Q |
201 |
accagaaaaacagtaacccttctcagagatgaaagaatgaatcacttg |
248 |
Q |
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||||||||||||||||||||||| |||| ||||||||||||||||||| |
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| T |
5279943 |
accagaaaaacagtaacccttcttagaggtgaaagaatgaatcacttg |
5279990 |
T |
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