View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10698_low_62 (Length: 223)
Name: NF10698_low_62
Description: NF10698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10698_low_62 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 51223207 - 51222987
Alignment:
| Q |
1 |
tgaacaatgttgaacacttatcgtcgcgtttaaatgcatattttcacactaatgtccacctatctaatgtgttcctgaatctacacaagcttcactcact |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51223207 |
tgaacaatgttgaacacttatcgtcgcgtttaaatgcatattttcacactaatgtccacctatctaatgtgttcctgaatctacacaagcttcactcact |
51223108 |
T |
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| Q |
101 |
gataacttcttctacaagtaactgcctgtgatcatctcatacgttgcatcagttgaactgatttgatgttcagaaccatttaacagcatctcacaagcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
51223107 |
gataacttcttctacaagtaactgcctgtgatca--tcatacgttgcatcagttgaactgatttgatgttcagaaccatttaacagcatctcacaagctt |
51223010 |
T |
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| Q |
201 |
aggcatggaagaacaccacacct |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
51223009 |
aggcatggaagaacaccacacct |
51222987 |
T |
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