View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10698_low_63 (Length: 222)

Name: NF10698_low_63
Description: NF10698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10698_low_63
NF10698_low_63
[»] chr4 (11 HSPs)
chr4 (16-206)||(49106589-49106779)
chr4 (51-206)||(49108693-49108848)
chr4 (67-206)||(50077259-50077397)
chr4 (44-194)||(49533697-49533846)
chr4 (126-206)||(11652452-11652532)
chr4 (126-206)||(3461202-3461282)
chr4 (160-206)||(26984727-26984773)
chr4 (160-206)||(26998800-26998846)
chr4 (160-206)||(48205832-48205878)
chr4 (166-205)||(26982549-26982588)
chr4 (164-200)||(34481155-34481191)
[»] chr6 (5 HSPs)
chr6 (67-206)||(10795950-10796088)
chr6 (67-206)||(10791712-10791850)
chr6 (16-81)||(10796110-10796175)
chr6 (159-206)||(30521242-30521289)
chr6 (161-206)||(8875691-8875736)
[»] chr1 (20 HSPs)
chr1 (50-206)||(38175590-38175746)
chr1 (127-206)||(28366259-28366338)
chr1 (125-206)||(14669769-14669850)
chr1 (125-206)||(14674447-14674528)
chr1 (125-206)||(14679825-14679906)
chr1 (125-206)||(14706054-14706135)
chr1 (151-206)||(14654400-14654455)
chr1 (151-206)||(14664191-14664246)
chr1 (151-206)||(14708570-14708625)
chr1 (151-206)||(14716283-14716338)
chr1 (151-206)||(33988062-33988117)
chr1 (152-206)||(14676625-14676679)
chr1 (152-206)||(14683743-14683797)
chr1 (156-206)||(14667171-14667221)
chr1 (152-206)||(14681592-14681646)
chr1 (159-206)||(14652525-14652572)
chr1 (159-206)||(14662316-14662363)
chr1 (162-206)||(11872541-11872585)
chr1 (155-200)||(28698549-28698594)
chr1 (165-206)||(37422175-37422216)
[»] chr5 (4 HSPs)
chr5 (65-206)||(7524875-7525015)
chr5 (151-206)||(1716512-1716567)
chr5 (126-206)||(3643607-3643687)
chr5 (163-206)||(4103249-4103292)
[»] chr8 (11 HSPs)
chr8 (59-206)||(40054212-40054359)
chr8 (126-206)||(41841212-41841292)
chr8 (126-206)||(44878950-44879030)
chr8 (126-206)||(44880891-44880971)
chr8 (156-206)||(10944459-10944509)
chr8 (152-202)||(42872514-42872564)
chr8 (161-206)||(37679757-37679802)
chr8 (159-206)||(37682057-37682104)
chr8 (126-202)||(42220909-42220985)
chr8 (151-205)||(42555144-42555198)
chr8 (176-206)||(44582870-44582900)
[»] chr2 (20 HSPs)
chr2 (59-206)||(43849952-43850096)
chr2 (125-206)||(30731974-30732055)
chr2 (151-206)||(8973304-8973359)
chr2 (151-206)||(8979314-8979369)
chr2 (151-206)||(9023439-9023494)
chr2 (151-206)||(9026778-9026833)
chr2 (153-206)||(32918074-32918127)
chr2 (151-206)||(9032045-9032100)
chr2 (152-206)||(8984686-8984740)
chr2 (156-206)||(9008018-9008068)
chr2 (158-206)||(2841077-2841125)
chr2 (151-206)||(9020839-9020894)
chr2 (156-206)||(30733985-30734035)
chr2 (151-206)||(9030390-9030445)
chr2 (161-206)||(19232459-19232504)
chr2 (151-206)||(8988447-8988502)
chr2 (151-206)||(8992140-8992195)
chr2 (151-206)||(9016485-9016540)
chr2 (162-197)||(39814115-39814150)
chr2 (166-206)||(10763938-10763978)
[»] chr3 (1 HSPs)
chr3 (161-206)||(15758563-15758608)


Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 49106779 - 49106589
Alignment:
Q  16 aaaataagtgttgagtcacgcacgggagtggtgtgtaagagccagtcacaaggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactga 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49106779 aaaataagtgttgagtcacgcacgggagtggtgtgtaagagtcagtcacaaggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactga 49106680  T
Q  116 ttagacagttgatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49106679 ttagacagttgatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 49106589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 51 - 206
Target Start/End: Complemental strand, 49108848 - 49108693
Alignment:
Q  51 taagagccagtcacaaggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactgattagacagttgatataaaagcagaagccagccacc 150  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||| ||||||||||||       
T  49108848 taagagtcagtcacaaggtggtactgcatataagtcccacatcgggtaataaggaaaggaactgaatagacagttgatataaaatcagaagccagcctat 49108749  T
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49108748 atttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 49108693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 50077397 - 50077259
Alignment:
Q  67 ggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactgattagacagttgatataaaagcagaagccagccaccctttcaactcatacct 166  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| | | ||||||||||||||||||||||||||||    ||||||||||||||||    
T  50077397 ggtggtactgcatataagtcccatatcgggtaatgaagaaagaaactaagt-gacagttgatataaaagcagaagccagctcttctttcaactcatacct 50077299  T
Q  167 ttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50077298 ttctcggccttttggctaagatcaagtgtagtatctgttc 50077259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 44 - 194
Target Start/End: Complemental strand, 49533846 - 49533697
Alignment:
Q  44 tggtgtgtaagagccagtcacaaggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactgattagacagttgatataaaagcagaagcc 143  Q
    ||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  49533846 tggtgtgtaagagtcagtcacaaaatggtactgcataaaagtcccacatcggctaatgaagaaagaaactgattagacagttgatataaaaccagaagcc 49533747  T
Q  144 agccaccctttcaactcatacctttctcggccttttggctaagatcaagtg 194  Q
    ||||    || |||| ||||||||||||||||  |||||||||||||||||    
T  49533746 agcccttattccaacccatacctttctcggcc-cttggctaagatcaagtg 49533697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 11652532 - 11652452
Alignment:
Q  126 gatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||| ||||||||| ||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11652532 gatataaaaccagaagccaacccatcttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 11652452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 3461282 - 3461202
Alignment:
Q  126 gatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||| || |||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3461282 gatataaaaccataagcgagcatctctttcaattcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 3461202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 26984773 - 26984727
Alignment:
Q  160 catacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26984773 catacctttctcggccttttggctaagatcaagtgtagtatctgttc 26984727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 26998846 - 26998800
Alignment:
Q  160 catacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26998846 catacctttctcggccttttggctaagatcaagtgtagtatctgttc 26998800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 48205832 - 48205878
Alignment:
Q  160 catacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  48205832 catacctttctcggccttttagctaagattaagtgtagtatctgttc 48205878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 26982549 - 26982588
Alignment:
Q  166 tttctcggccttttggctaagatcaagtgtagtatctgtt 205  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  26982549 tttctcggcctcttggctaagatcaagtgtagcatctgtt 26982588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 34481191 - 34481155
Alignment:
Q  164 cctttctcggccttttggctaagatcaagtgtagtat 200  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  34481191 cctttctcagccttttggctaagatcgagtgtagtat 34481155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 10796088 - 10795950
Alignment:
Q  67 ggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactgattagacagttgatataaaagcagaagccagccaccctttcaactcatacct 166  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||    ||||||||||||||||    
T  10796088 ggtggtactgcatataagtcccacatcgggtaatgaagaaagaaactgagt-gacagttgatataaaagcagaagccagctcttctttcaactcatacct 10795990  T
Q  167 ttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10795989 ttctcggccttttggctaagatcaagtgtagtatctgttc 10795950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 10791850 - 10791712
Alignment:
Q  67 ggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactgattagacagttgatataaaagcagaagccagccaccctttcaactcatacct 166  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| | | |||||||||||||||||||||||||| |    ||||||||||||||||    
T  10791850 ggtggtactgcatataagtcccatatcgggtaatgaagaaagaaactaagt-gacagttgatataaaagcagaagccaactcttctttcaactcatacct 10791752  T
Q  167 ttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10791751 ttctcggccttttggctaagatcaagtgtagtatctgttc 10791712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 10796175 - 10796110
Alignment:
Q  16 aaaataagtgttgagtcacgcacgggagtggtgtgtaagagccagtcacaaggtggtactgcatat 81  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  10796175 aaaataagtggtgagtcacgcacgggagtggtgtgtaagagtcagtcacaaggtgctactgcatat 10796110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 30521242 - 30521289
Alignment:
Q  159 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  30521242 tcatacctttctcgaccttttggctgagatcaagtgtagtatctgttc 30521289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 8875691 - 8875736
Alignment:
Q  161 atacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||    
T  8875691 atacatttcccggccttttggctaagatcaagtgtaatatctgttc 8875736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 1e-52; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 50 - 206
Target Start/End: Complemental strand, 38175746 - 38175590
Alignment:
Q  50 gtaagagccagtcacaaggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactgattagacagttgatataaaagcagaagccagccac 149  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |||||| ||||||||||||| || || |      
T  38175746 gtaagagtcggtcacaaggtggtactgcatataagtcccacatcgggtaatgaagaaagaaactaagtatacagttcatataaaagcagatgcgaggctt 38175647  T
Q  150 cctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38175646 catttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 38175590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 28366338 - 28366259
Alignment:
Q  127 atataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||| || | || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28366338 atataaaagcagatgcgaacccctctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 28366259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 14669850 - 14669769
Alignment:
Q  125 tgatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||| | | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14669850 tgatataaaagcagcaacgagcccatctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14669769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 14674447 - 14674528
Alignment:
Q  125 tgatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||| | | |||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14674447 tgatataaaagcagcacctagccaatcttccaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14674528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 14679825 - 14679906
Alignment:
Q  125 tgatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||| | | |||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14679825 tgatataaaagcagcacctagccaatcttccaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14679906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 14706054 - 14706135
Alignment:
Q  125 tgatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||| | | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706054 tgatataaaagcagcaccgagcccatctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14706135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 14654455 - 14654400
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14654455 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14654400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 14664246 - 14664191
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14664246 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14664191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 14708570 - 14708625
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14708570 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14708625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 14716283 - 14716338
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14716283 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14716338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 33988062 - 33988117
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33988062 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 33988117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 14676625 - 14676679
Alignment:
Q  152 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14676625 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14676679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 14683743 - 14683797
Alignment:
Q  152 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14683743 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14683797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 14667221 - 14667171
Alignment:
Q  156 aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14667221 aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14667171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 14681592 - 14681646
Alignment:
Q  152 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14681592 tttcaacttatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14681646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 14652525 - 14652572
Alignment:
Q  159 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14652525 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14652572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 14662316 - 14662363
Alignment:
Q  159 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14662316 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 14662363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 11872585 - 11872541
Alignment:
Q  162 tacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  11872585 tacctttctcggccttttgactaagatcaagtgtactatctgttc 11872541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 28698549 - 28698594
Alignment:
Q  155 caactcatacctttctcggccttttggctaagatcaagtgtagtat 200  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||    
T  28698549 caactcatacatttctcggtcttttggctaagatcaaatgtagtat 28698594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 37422175 - 37422216
Alignment:
Q  165 ctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  37422175 ctttctcggccttttggctaagatcaagtgtagcatatgttc 37422216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 7524875 - 7525015
Alignment:
Q  65 aaggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactgattagacagttgatataaaagcagaagccagccaccctttcaactcatac 164  Q
    |||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||| |||||||||||| | || ||      |||||| ||||||    
T  7524875 aaggtggtgctgcataaaagtcccacatcgggtaatgaagaaaagaactgagtagacagtggatataaaagca-atgcaaggtgttgtttcaagtcatac 7524973  T
Q  165 ctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7524974 ctttctcggccttttggctaagatcaagtgtagtatctgttc 7525015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 1716567 - 1716512
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1716567 cttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 1716512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 3643607 - 3643687
Alignment:
Q  126 gatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||| ||||||| || |   |||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3643607 gatataaaaacagaagcgagacttactttaaattcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 3643687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 4103249 - 4103292
Alignment:
Q  163 acctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||| || |||||| ||||||||||||||||||||||||    
T  4103249 acctttctcagcattttggttaagatcaagtgtagtatctgttc 4103292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 40054212 - 40054359
Alignment:
Q  59 agtcacaaggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactgattagacagttgatataaaagcagaagccagccaccctttcaac 158  Q
    |||| ||||||  ||||||||| |||||||||||||  ||||||||||||||||||| |||||| | |||||||||| ||| || || |  | ||| ||     
T  40054212 agtcccaaggtactactgcataaaagtcccacatcgaataatgaagaaaggaactgagtagacactggatataaaagaagatgcgaggcctcattttaat 40054311  T
Q  159 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40054312 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 40054359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 41841292 - 41841212
Alignment:
Q  126 gatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41841292 gatataaaagcagaagccaacccatctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 41841212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 44878950 - 44879030
Alignment:
Q  126 gatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||| || ||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44878950 gatataaaagcagaggcgagcccaacattcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 44879030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 44880971 - 44880891
Alignment:
Q  126 gatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||| || ||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44880971 gatataaaagcagaggcgagcccaacattcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 44880891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 10944509 - 10944459
Alignment:
Q  156 aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10944509 aactcatacctttctcgaccttttggctaagatcaagtgtagtatctgttc 10944459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 42872564 - 42872514
Alignment:
Q  152 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatct 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42872564 tttcaactcatacctttctcggccttttggctaagattaagtgtagtatct 42872514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 37679757 - 37679802
Alignment:
Q  161 atacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  37679757 atacctttctcggccttttggctaagatcaagtgtagtatctgttc 37679802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 37682057 - 37682104
Alignment:
Q  159 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  37682057 tcatacatttctcggccttttggctaagatcaagtgtagtatctgttc 37682104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 42220985 - 42220909
Alignment:
Q  126 gatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatct 202  Q
    |||||||||||||| || |||    |||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  42220985 gatataaaagcagaggcgagcatagctttcaactcatacatttttcggtcttttggctaagatcaagtgtagtatct 42220909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 42555198 - 42555144
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgtt 205  Q
    |||||||||||||||||||| |  |||||||||||||||||||| || |||||||    
T  42555198 ctttcaactcatacctttcttgatcttttggctaagatcaagtgcagaatctgtt 42555144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 206
Target Start/End: Original strand, 44582870 - 44582900
Alignment:
Q  176 ttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||    
T  44582870 ttttggctaagatcaagtgtagtatctgttc 44582900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 43849952 - 43850096
Alignment:
Q  59 agtcacaaggtggtactgcatataagtcccacatcgggtaatgaagaaaggaactgattagacagttgatataaaagcagaagcc-agccaccctttcaa 157  Q
    |||| ||||||| |||||||||   ||||||||||||||||| ||||||||| |||| |||||||  |||||||||||||| ||  ||||    ||||||    
T  43849952 agtcccaaggtgctactgcata---gtcccacatcgggtaatcaagaaaggatctgagtagacagaggatataaaagcagatgcgtagcctta-tttcaa 43850047  T
Q  158 ctcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43850048 ctcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 43850096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 30731974 - 30732055
Alignment:
Q  125 tgatataaaagcagaagccagccaccctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||| | | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30731974 tgatataaaagcagcaacgagcccatctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 30732055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 8973304 - 8973359
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8973304 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 8973359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 8979314 - 8979369
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8979314 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 8979369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 9023439 - 9023494
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9023439 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 9023494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 9026778 - 9026833
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9026778 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 9026833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 32918074 - 32918127
Alignment:
Q  153 ttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32918074 ttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 32918127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 9032045 - 9032100
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9032045 ctttcaactcatacctttctcggccttttggttaagatcaagtgtagtatctgttc 9032100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 8984686 - 8984740
Alignment:
Q  152 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8984686 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatttgttc 8984740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 9008018 - 9008068
Alignment:
Q  156 aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9008018 aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 9008068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 2841125 - 2841077
Alignment:
Q  158 ctcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2841125 ctcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 2841077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 9020839 - 9020894
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  9020839 ctttcaattcatacatttctcggccttttggctaagatcaagtgtagtatctgttc 9020894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 30733985 - 30734035
Alignment:
Q  156 aactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30733985 aacttatacctttctcggccttttggctaagatcaagtgtagtatctgttc 30734035  T

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Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 9030390 - 9030445
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  9030390 ctttcaactcatatttttcttggccttttggctaagatcaagtgtagtatctgttc 9030445  T

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Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 19232504 - 19232459
Alignment:
Q  161 atacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  19232504 atacctttctcggccttttggctaagatcaagtgtaatatctgttc 19232459  T

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Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 8988447 - 8988502
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||||||| |||||    
T  8988447 ctttcaacttataccattcttggccttttggcgaagatcaagtgtagtatttgttc 8988502  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 8992140 - 8992195
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||| ||||||| |||||||| | |||||||||||||||||||||||||| |||||    
T  8992140 cttttaactcatgcctttctcagtcttttggctaagatcaagtgtagtatatgttc 8992195  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 9016485 - 9016540
Alignment:
Q  151 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||| ||||||||||||  ||| |||||||||||||||||| ||||||||||||||    
T  9016485 cttttaactcataccttattcgaccttttggctaagatcaaatgtagtatctgttc 9016540  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 39814115 - 39814150
Alignment:
Q  162 tacctttctcggccttttggctaagatcaagtgtag 197  Q
    ||||||||||||||||||||||| ||||||||||||    
T  39814115 tacctttctcggccttttggctatgatcaagtgtag 39814150  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 10763978 - 10763938
Alignment:
Q  166 tttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    |||||||| |||||| ||||||||||||||||||| |||||    
T  10763978 tttctcggtcttttgactaagatcaagtgtagtatatgttc 10763938  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 15758608 - 15758563
Alignment:
Q  161 atacctttctcggccttttggctaagatcaagtgtagtatctgttc 206  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||    
T  15758608 atacctttctcagccttttggctaagatcaagtgtaatatctgttc 15758563  T

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