View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10698_low_75 (Length: 206)
Name: NF10698_low_75
Description: NF10698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10698_low_75 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 5 - 206
Target Start/End: Complemental strand, 47644 - 47443
Alignment:
| Q |
5 |
ctagagattgaaggtgaaggaaaaaagattgaagggtcttcttgttctaattatctagattcaactaattgtgtagaaaaatttaatcgctctaattgtg |
104 |
Q |
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| T |
47644 |
ctagagattgacggtgaaggaaaaaagattgaagggtcttcttgttctaattatctagattcaactaattgtgtagaaaaatttaatcgctctaattgtg |
47545 |
T |
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| Q |
105 |
gatccaaagaatctggcaaaaagtctaggacgacattggacaagaatcaagaacaactatcactggcaactcaagatagatgtcaaacaaatattttaga |
204 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |
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| T |
47544 |
gatccaaagaatctgacaaaaagtctaggacgacattggacaagaatcaagaacaactatcactgtcaactcaagataaatgtcaaacaaatattttaga |
47445 |
T |
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| Q |
205 |
gt |
206 |
Q |
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|| |
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| T |
47444 |
gt |
47443 |
T |
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