View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10699_high_4 (Length: 250)
Name: NF10699_high_4
Description: NF10699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10699_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 49 - 240
Target Start/End: Original strand, 40586110 - 40586301
Alignment:
| Q |
49 |
gagttacacccaaatttaacacatatagatcannnnnnnnccctttcctattacaaattaaaactaaatttcttgtcaactaactcaagaataccaatgt |
148 |
Q |
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| T |
40586110 |
gagttacacccaaatttaacacatatagaacattttttttccctttcctattacaaattaaaactaaatttcttgtcaactaactcaagaataccaatgt |
40586209 |
T |
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| Q |
149 |
cagcattatcatgatcttcaatggctatattcagatccaaagagaggtttagattactttgatgatcctctatcatggtctctttccctttg |
240 |
Q |
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| T |
40586210 |
cagcattatcatgatcttcaatggcgatatttagatccaaagagaggtttagattactttgatgatcctctatcatggtctctttccctttg |
40586301 |
T |
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