View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10699_low_22 (Length: 250)
Name: NF10699_low_22
Description: NF10699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10699_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 42468194 - 42467980
Alignment:
| Q |
1 |
gacttacttgaatgaaggaggattagaaggccattctggcacataattatccaaaggatagcaatgaagtctaaggtagtccctccaattatgcacctcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42468194 |
gacttacttgaatgaaggaggattagaaggccattctggcacataattatccaaaggatagcaatgaagtctaaggtagtccctccaattatgcacctcc |
42468095 |
T |
|
| Q |
101 |
tctttgttcacattaaaacttgtagatagtctcattgtctttgttggatcgtctgaatacaacttcattttctcctccactggcaacttgaaaaaatcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42468094 |
tctttgttcacattaaaacttgtagatagtctcattgtctttgttggatcgtctgaatacaacttcattttctcctccactggcaacttgaaaaaatcat |
42467995 |
T |
|
| Q |
201 |
atgccacttctgctg |
215 |
Q |
| |
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||||||||||||||| |
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| T |
42467994 |
atgccacttctgctg |
42467980 |
T |
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