View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10699_low_5 (Length: 398)
Name: NF10699_low_5
Description: NF10699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10699_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 16 - 385
Target Start/End: Original strand, 782709 - 783078
Alignment:
| Q |
16 |
ataagtttcttcgaattttgtactttattcaggcaagtatagaatagtattcaacaaaagtgtgaataataatgttgacttatggactcgtttgtttaag |
115 |
Q |
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| T |
782709 |
ataagtttcttcgaattttgtactttattcaggcaagtatagaatagtattcaacaaaagtgtgaataataatgttgacttatggactcgtttgtttaag |
782808 |
T |
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| Q |
116 |
cttttgaaaagactgattttaagtttgtgtagaaaagtgataaatcttccatatttcatgtaaaacagaagatatttttcgtttagttattgttgatatt |
215 |
Q |
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| T |
782809 |
cttttgaaaagactgattttaagtttgtgtagaaaagtgataaatcttccatatttcatgtaaaacagaagatatttttcgtttagttattgttgatatt |
782908 |
T |
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| Q |
216 |
taaataagggaaatagtaacttatcatggaggttgacactattttcaaattagtgttaggccttcacattaatacatgcattgtagagcatcgatcctta |
315 |
Q |
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| T |
782909 |
taaataagggaaatagtaacttatcatggaggttgacactattttcaaattagtgttaggccttcacattaatacatgcattgtagagcatcgatcctta |
783008 |
T |
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| Q |
316 |
acatagacagaccatattagagtatgtaacattggtattttggtggcattattatattctcgcgttcttc |
385 |
Q |
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| T |
783009 |
acatagacagaccatattagagtatgtaacattggtattttggtggcattattatattctcgtgttcttc |
783078 |
T |
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