View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10699_low_8 (Length: 353)
Name: NF10699_low_8
Description: NF10699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10699_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 41538230 - 41537896
Alignment:
| Q |
1 |
gaaatcatagttaggttgatcgtttgacacggggggttttgtggcggagacaaatggaatcgaagaagtccaattttctaacctagatttcgcagcggtg |
100 |
Q |
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| T |
41538230 |
gaaatcatagttaggtctatcgtttgacacggggggttttgtggcggagacaaatggaatcgaagaagtccaattttctaacctagatttcgcagcggtg |
41538131 |
T |
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| Q |
101 |
gtgattttaacggaagattgatcggaatttgttggattgacggaattacccttggaaacggggtaataagcgaaccagaaaaagaagtattgaaaaacat |
200 |
Q |
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| T |
41538130 |
gtgattttaacggaagattgatcggaatttgttggattgacggaattacccttggagacggggtaataagcgaaccagaaaaagaagtattgaaaaacat |
41538031 |
T |
|
| Q |
201 |
tgagttgaatttgtgaagaggaagatgaagatgggaagactgatggaagaagatcggagagattgtgtttatccgaaagggagcgagaccagtgaggaag |
300 |
Q |
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| T |
41538030 |
tgagttgaatttgtgaagaggaagatgaagatgggaagactgatggaagaagatcggagagattgtgtttatccgaaagggagcgagaccagtgaggaag |
41537931 |
T |
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| Q |
301 |
acgttcggcggggaaaagatatttaacgagggaga |
335 |
Q |
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|||||||| |||||||||||||||||||||||||| |
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| T |
41537930 |
acgttcggaggggaaaagatatttaacgagggaga |
41537896 |
T |
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