View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1069_high_18 (Length: 309)
Name: NF1069_high_18
Description: NF1069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1069_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 29 - 281
Target Start/End: Complemental strand, 40183267 - 40183015
Alignment:
| Q |
29 |
tgaaaatatcatttgtcacaatcacaatgtgaataacttctcattcaattcaagacttcaaaataacaacgagtcttgctgcaagtgtgaataagatagt |
128 |
Q |
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| T |
40183267 |
tgaaaatatcatttgtcacaatcacaatgtgaataacttctcattcaattcaagacttcaaaataacaacgagtcttgctgcaagtgtgaataagatagt |
40183168 |
T |
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| Q |
129 |
tgttttcacacaatttgtagttggaactgtttgccaccaatgctaaggtgcataatggctgccaacactttccattttgtaacaagaaaaagttaaaaag |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
40183167 |
tgttttcacacaatttgtagttggaactgtttgccaccaatgctaaggtgcataatggctgccaacactttccattttgtaacaaaaaaaagttaaaaag |
40183068 |
T |
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| Q |
229 |
atataaaaatacaagttcattacaagagcatgcaatgtactgatgtacaaact |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40183067 |
atataaaaatacaagttcattacaagagcatgcaatgtactgatgtacaaact |
40183015 |
T |
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