View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10700_low_17 (Length: 236)

Name: NF10700_low_17
Description: NF10700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10700_low_17
NF10700_low_17
[»] chr6 (16 HSPs)
chr6 (14-113)||(352348-352447)
chr6 (124-205)||(8265028-8265109)
chr6 (111-205)||(12605608-12605702)
chr6 (124-205)||(10145226-10145307)
chr6 (112-205)||(23916183-23916276)
chr6 (104-205)||(28605561-28605662)
chr6 (112-209)||(359542-359641)
chr6 (111-190)||(2913404-2913483)
chr6 (124-205)||(12217501-12217583)
chr6 (148-216)||(29284533-29284601)
chr6 (112-205)||(9343176-9343269)
chr6 (124-205)||(30438799-30438880)
chr6 (124-190)||(12240171-12240237)
chr6 (111-159)||(359647-359695)
chr6 (169-215)||(33127842-33127888)
chr6 (112-152)||(8264971-8265011)
[»] chr7 (43 HSPs)
chr7 (110-216)||(22618208-22618314)
chr7 (111-205)||(41487847-41487941)
chr7 (124-216)||(14543313-14543405)
chr7 (124-216)||(10674168-10674260)
chr7 (112-216)||(40234765-40234869)
chr7 (110-205)||(45025650-45025745)
chr7 (111-205)||(24164572-24164666)
chr7 (123-216)||(7456429-7456522)
chr7 (111-215)||(39413874-39413978)
chr7 (117-205)||(47484025-47484113)
chr7 (110-205)||(33901094-33901189)
chr7 (118-203)||(3633196-3633281)
chr7 (111-216)||(47612335-47612440)
chr7 (124-216)||(29559448-29559540)
chr7 (125-205)||(33039572-33039652)
chr7 (110-200)||(27320355-27320445)
chr7 (123-216)||(41088897-41088990)
chr7 (111-205)||(18064778-18064872)
chr7 (126-216)||(31902963-31903053)
chr7 (123-205)||(40198660-40198742)
chr7 (110-205)||(41395659-41395754)
chr7 (107-205)||(37006450-37006548)
chr7 (124-205)||(13860229-13860309)
chr7 (127-216)||(28248476-28248569)
chr7 (112-152)||(33901037-33901077)
chr7 (122-205)||(45123301-45123384)
chr7 (107-161)||(14543262-14543316)
chr7 (110-160)||(24164513-24164563)
chr7 (110-160)||(45025591-45025641)
chr7 (110-178)||(3633274-3633342)
chr7 (154-205)||(7999489-7999540)
chr7 (110-161)||(31903050-31903101)
chr7 (109-160)||(47484122-47484173)
chr7 (163-205)||(12806964-12807006)
chr7 (127-205)||(47280188-47280265)
chr7 (111-160)||(12806906-12806955)
chr7 (124-161)||(13860317-13860354)
chr7 (123-160)||(24932393-24932430)
chr7 (127-216)||(29835099-29835187)
chr7 (127-176)||(40599998-40600047)
chr7 (112-161)||(41088851-41088900)
chr7 (111-160)||(41487789-41487838)
chr7 (112-160)||(40198603-40198651)
[»] scaffold0059 (2 HSPs)
scaffold0059 (111-216)||(26584-26689)
scaffold0059 (111-161)||(26686-26736)
[»] chr1 (25 HSPs)
chr1 (110-216)||(19998456-19998562)
chr1 (123-205)||(13321770-13321852)
chr1 (111-213)||(34174884-34174986)
chr1 (123-216)||(15699509-15699602)
chr1 (112-216)||(31050295-31050399)
chr1 (111-205)||(27687839-27687933)
chr1 (123-205)||(45977104-45977186)
chr1 (111-205)||(51590486-51590580)
chr1 (109-201)||(48565587-48565679)
chr1 (123-205)||(52279244-52279326)
chr1 (130-205)||(29438194-29438269)
chr1 (123-205)||(52030878-52030960)
chr1 (110-205)||(13770765-13770860)
chr1 (111-205)||(44224325-44224419)
chr1 (112-205)||(22182764-22182857)
chr1 (111-203)||(18038746-18038838)
chr1 (123-190)||(5966946-5967013)
chr1 (109-160)||(25238674-25238725)
chr1 (110-205)||(43850946-43851041)
chr1 (110-205)||(13320300-13320395)
chr1 (124-193)||(20486725-20486794)
chr1 (169-205)||(12175507-12175543)
chr1 (111-161)||(15699462-15699512)
chr1 (110-160)||(51590427-51590477)
chr1 (113-161)||(22182865-22182913)
[»] chr8 (28 HSPs)
chr8 (110-205)||(43292624-43292719)
chr8 (109-205)||(34604837-34604933)
chr8 (127-205)||(34745313-34745391)
chr8 (123-205)||(40645720-40645802)
chr8 (111-216)||(43932047-43932152)
chr8 (110-205)||(35583939-35584034)
chr8 (112-205)||(7548496-7548589)
chr8 (111-215)||(9550107-9550211)
chr8 (110-205)||(45372761-45372856)
chr8 (123-205)||(13831885-13831967)
chr8 (123-205)||(29690492-29690574)
chr8 (111-216)||(43409832-43409937)
chr8 (129-216)||(38298517-38298604)
chr8 (126-205)||(38494295-38494374)
chr8 (123-205)||(9633137-9633219)
chr8 (127-189)||(45180111-45180173)
chr8 (127-215)||(41624752-41624840)
chr8 (111-205)||(44579891-44579985)
chr8 (123-216)||(24599714-24599807)
chr8 (124-200)||(27108000-27108076)
chr8 (108-160)||(43292563-43292615)
chr8 (111-214)||(9420585-9420688)
chr8 (111-161)||(43932149-43932199)
chr8 (111-160)||(34745255-34745304)
chr8 (109-160)||(13831976-13832027)
chr8 (123-178)||(30734528-30734583)
chr8 (130-161)||(38298601-38298632)
chr8 (111-160)||(34604779-34604828)
[»] chr4 (50 HSPs)
chr4 (111-216)||(33615824-33615929)
chr4 (122-216)||(54673355-54673449)
chr4 (111-205)||(29686398-29686492)
chr4 (111-205)||(33622878-33622972)
chr4 (112-205)||(4418153-4418246)
chr4 (112-205)||(36196364-36196457)
chr4 (112-205)||(52136698-52136791)
chr4 (109-205)||(54864120-54864216)
chr4 (127-205)||(31853123-31853201)
chr4 (111-205)||(43556689-43556783)
chr4 (112-205)||(25756711-25756804)
chr4 (112-205)||(25874756-25874849)
chr4 (112-189)||(32193474-32193551)
chr4 (124-205)||(35877370-35877451)
chr4 (112-205)||(37895254-37895347)
chr4 (126-210)||(28460797-28460881)
chr4 (127-205)||(35929066-35929143)
chr4 (127-205)||(42160029-42160107)
chr4 (123-205)||(43141776-43141858)
chr4 (123-216)||(27587256-27587349)
chr4 (112-203)||(7086189-7086280)
chr4 (123-205)||(8347501-8347584)
chr4 (113-216)||(56491072-56491175)
chr4 (127-205)||(1205138-1205216)
chr4 (111-205)||(22019932-22020026)
chr4 (127-205)||(50511259-50511337)
chr4 (127-205)||(40592726-40592804)
chr4 (127-205)||(52966409-52966487)
chr4 (123-184)||(1100906-1100967)
chr4 (108-205)||(9813449-9813548)
chr4 (110-189)||(38208321-38208400)
chr4 (107-161)||(25756812-25756866)
chr4 (141-216)||(24100804-24100876)
chr4 (127-190)||(19350626-19350688)
chr4 (123-193)||(50511398-50511468)
chr4 (126-167)||(22210870-22210911)
chr4 (111-160)||(36196466-36196515)
chr4 (148-216)||(1140910-1140978)
chr4 (109-160)||(54864060-54864111)
chr4 (111-153)||(29686508-29686550)
chr4 (122-152)||(52136808-52136838)
chr4 (123-161)||(54673320-54673358)
chr4 (123-152)||(4418107-4418136)
chr4 (124-161)||(27587346-27587383)
chr4 (112-161)||(33615778-33615827)
chr4 (123-160)||(52966496-52966533)
chr4 (112-160)||(8347593-8347641)
chr4 (111-219)||(36132633-36132741)
chr4 (113-160)||(43556792-43556840)
chr4 (157-205)||(50511471-50511519)
[»] chr3 (36 HSPs)
chr3 (111-205)||(31376173-31376267)
chr3 (112-205)||(39616910-39617003)
chr3 (124-205)||(45113745-45113826)
chr3 (110-205)||(53703786-53703882)
chr3 (123-205)||(36191533-36191615)
chr3 (110-216)||(48346447-48346553)
chr3 (123-205)||(53284372-53284454)
chr3 (123-216)||(27363171-27363264)
chr3 (123-216)||(48643614-48643707)
chr3 (123-199)||(25313288-25313364)
chr3 (110-205)||(8764288-8764382)
chr3 (110-205)||(8769190-8769284)
chr3 (123-205)||(43901637-43901719)
chr3 (125-201)||(50100206-50100282)
chr3 (123-205)||(16123812-16123894)
chr3 (131-205)||(19227326-19227400)
chr3 (123-205)||(24489323-24489405)
chr3 (127-205)||(27302093-27302171)
chr3 (132-205)||(21944345-21944418)
chr3 (123-179)||(50659959-50660015)
chr3 (114-216)||(2544503-2544606)
chr3 (127-205)||(44118197-44118275)
chr3 (112-161)||(2544436-2544485)
chr3 (111-160)||(19227409-19227458)
chr3 (123-187)||(19899687-19899751)
chr3 (115-160)||(21944291-21944336)
chr3 (112-153)||(46220365-46220406)
chr3 (111-160)||(53703728-53703777)
chr3 (111-187)||(27330036-27330112)
chr3 (123-163)||(44118281-44118321)
chr3 (109-160)||(45113835-45113886)
chr3 (110-160)||(31376276-31376326)
chr3 (106-160)||(39617012-39617066)
chr3 (112-161)||(48643704-48643753)
chr3 (124-160)||(36191485-36191521)
chr3 (139-215)||(45746517-45746593)
[»] scaffold0110 (1 HSPs)
scaffold0110 (123-216)||(40200-40294)
[»] chr5 (25 HSPs)
chr5 (123-205)||(20502143-20502225)
chr5 (110-205)||(7537077-7537172)
chr5 (111-205)||(29451949-29452042)
chr5 (124-205)||(38978798-38978879)
chr5 (110-205)||(24173417-24173512)
chr5 (112-205)||(27600814-27600907)
chr5 (111-205)||(5355607-5355701)
chr5 (123-205)||(13932517-13932599)
chr5 (160-216)||(19211325-19211381)
chr5 (110-205)||(33247289-33247384)
chr5 (123-205)||(9630245-9630327)
chr5 (127-205)||(35204979-35205057)
chr5 (127-205)||(35212102-35212180)
chr5 (124-189)||(29002753-29002818)
chr5 (111-205)||(32455139-32455231)
chr5 (111-189)||(29874315-29874393)
chr5 (111-216)||(73782-73887)
chr5 (123-205)||(13278942-13279024)
chr5 (112-175)||(8680627-8680690)
chr5 (109-161)||(73884-73936)
chr5 (130-186)||(4527722-4527778)
chr5 (108-160)||(29451888-29451940)
chr5 (112-161)||(13932460-13932509)
chr5 (112-157)||(29002846-29002891)
chr5 (127-215)||(13128239-13128327)
[»] chr2 (26 HSPs)
chr2 (122-216)||(9373403-9373497)
chr2 (124-205)||(15239703-15239784)
chr2 (119-205)||(6971626-6971712)
chr2 (123-205)||(40534523-40534605)
chr2 (123-205)||(28143753-28143837)
chr2 (131-216)||(41464759-41464844)
chr2 (111-216)||(27306756-27306859)
chr2 (123-205)||(45076398-45076480)
chr2 (123-216)||(25795248-25795341)
chr2 (126-215)||(27311590-27311679)
chr2 (112-205)||(36103392-36103485)
chr2 (127-216)||(3365289-3365378)
chr2 (124-215)||(11687486-11687577)
chr2 (111-160)||(45076340-45076389)
chr2 (123-199)||(38448948-38449024)
chr2 (129-196)||(14329203-14329270)
chr2 (124-205)||(11724326-11724408)
chr2 (139-205)||(23464522-23464588)
chr2 (111-160)||(36103494-36103543)
chr2 (110-161)||(25795338-25795389)
chr2 (110-161)||(41464711-41464762)
chr2 (108-166)||(21424896-21424954)
chr2 (125-162)||(4755474-4755511)
chr2 (111-160)||(15239793-15239842)
chr2 (111-160)||(28143846-28143895)
chr2 (126-162)||(38449037-38449073)
[»] scaffold0767 (2 HSPs)
scaffold0767 (126-205)||(3865-3944)
scaffold0767 (109-161)||(3805-3857)
[»] scaffold0287 (2 HSPs)
scaffold0287 (118-203)||(12804-12889)
scaffold0287 (110-178)||(12743-12811)
[»] scaffold0533 (1 HSPs)
scaffold0533 (124-190)||(3251-3317)
[»] scaffold0023 (1 HSPs)
scaffold0023 (123-215)||(112833-112925)
[»] scaffold0200 (1 HSPs)
scaffold0200 (123-205)||(25624-25706)
[»] scaffold0460 (2 HSPs)
scaffold0460 (124-201)||(12273-12350)
scaffold0460 (124-193)||(7714-7783)
[»] scaffold0015 (1 HSPs)
scaffold0015 (168-216)||(17430-17478)
[»] scaffold0176 (1 HSPs)
scaffold0176 (112-205)||(19350-19444)
[»] scaffold0474 (1 HSPs)
scaffold0474 (123-198)||(11858-11934)


Alignment Details
Target: chr6 (Bit Score: 96; Significance: 3e-47; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 352447 - 352348
Alignment:
Q  14 agagatgagagtgaaataagagaagcaagaagttacatgagtctgtatattcatttccacactatatcctctcaccaacccacccacgtattctattata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  352447 agagatgagagtgaaataagagaagcaagaagttacatgagtctgtgtattcatttccacactatatcctctcaccaacccacccacgtattctattata 352348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 8265109 - 8265028
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||| | ||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  8265109 tccttattataagaaaaagttgattttttaagttcattgtgtaagtgatgtatctagtctatatttataacaagatacatta 8265028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 12605608 - 12605702
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| |||  |||||||||||||||||||||||||||||   ||||||| ||| ||||||||| |||||||||||||||| |||||||||||    
T  12605608 atactccctccgttccttattataagaaacaattgattttttttattcattacgtaagtgatgtatttagtctatatttacaataagatacatta 12605702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 10145226 - 10145307
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||| |||||||||||| | ||||| || || |||||||||||||||||||||||||| |||||||||||    
T  10145226 tccttattataagaaataattgatttttttgattcatcatataagtgatgtatctagtctatatttacaataagatacatta 10145307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 23916276 - 23916183
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| |||||||||||||||||||||||| ||||||| |||||| |||| ||||| |||||| |||||||||| ||| ||||||||||    
T  23916276 tactccctccggtccttattataagaaacaattgactttttagattcattgtgtatgtgatatatctaatctatatttataacgagatacatta 23916183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 28605561 - 28605662
Alignment:
Q  104 ttctattatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacat 203  Q
    |||||||||||||| ||  |||||||||||||||||||||| | ||||| |||||||| |||| ||||||||| ||  |||||||||||| |||||||||    
T  28605561 ttctattatactccctctggtccttattataagaaacaattaacttttttggttcattgtgtaagtgatgtatttaaactatatttacaataagatacat 28605660  T
Q  204 ta 205  Q
    ||    
T  28605661 ta 28605662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 359542 - 359641
Alignment:
Q  112 tactccatcctgtccttatt-ataagaaa-caattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagtta 209  Q
    |||||| ||||||||||||| |||| ||| |||||||||||||| ||||||| |||| |||||||||||| |||||||||| ||| ||||||||||||||    
T  359542 tactccctcctgtccttatttataaaaaaacaattgattttttatgttcattgtgtaagtgatgtatctaatctatatttataacgagatacattagtta 359641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 2913483 - 2913404
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattta 190  Q
    ||||||| ||| |||||||||||||| ||||||||| |||||||||||||| | || || ||||||||||||||||||||    
T  2913483 atactccctccggtccttattataagcaacaattgactttttaggttcattgtataagtaatgtatctagtctatattta 2913404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 12217501 - 12217583
Alignment:
Q  124 tccttattataagaaacaattgatttttta-ggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||| ||||||||||||||||  |||| ||| | || |||||||||||||||||||||||||| |||||||||||    
T  12217501 tccttattataaaaaacaattgattttttttggtttattgtataagtgatgtatctagtctatatttacaataagatacatta 12217583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 29284533 - 29284601
Alignment:
Q  148 tttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||| ||| ||||||    
T  29284533 tttttaggttcattatgtaagtgatgtatctagtctatatttataacgagatgcattaattattcaatg 29284601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 9343269 - 9343176
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| |||||||||||| ||||||||||| |||| |  || ||| ||||  | |||||||||||||||||||| ||||||||||||||    
T  9343269 tactccttccggtccttattataggaaacaattgacttttcaaatttattgtgtaaataatgtatctagtctatatttataacaagatacatta 9343176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 30438880 - 30438799
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||| |||| | ||||| |||| ||| | || |||||||||||||||||||||||||| || ||||||||    
T  30438880 tccttattataagaaataattaacttttttggtttattgtataagtgatgtatctagtctatatttacaataaaatacatta 30438799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 12240237 - 12240171
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattta 190  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||  ||||||||||| | ||||||||    
T  12240237 tccttattacaagaaataattgattttttaggttcattgtgtaaatgatgtatctaatttatattta 12240171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 359695 - 359647
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttca 159  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||||||    
T  359695 atacttcatactgtccttattataagaaacaattgactttttaggttca 359647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 33127842 - 33127888
Alignment:
Q  169 tgatgtatctagtctatatttacaacaagatacattagttactcaat 215  Q
    |||||||||||||||||||||  |||||||||||||| ||| |||||    
T  33127842 tgatgtatctagtctatatttgtaacaagatacattaattattcaat 33127888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 8264971 - 8265011
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgatttttt 152  Q
    |||||||||| ||| ||||||||| ||||||||||||||||    
T  8264971 tactccatccggtctttattataaaaaacaattgatttttt 8265011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 22618314 - 22618208
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagtta 209  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||    
T  22618314 tatactcactccggtccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatatttacaacaagatacattaatta 22618215  T
Q  210 ctcaatg 216  Q
    |||||||    
T  22618214 ctcaatg 22618208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 41487941 - 41487847
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  41487941 atactccctccggtccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacatta 41487847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 14543405 - 14543313
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  14543405 tccttattataagaaacaattgattgtttaagtttattatgtaagtgatgtatctagtctatatttacatcaagatacattaattactcaatg 14543313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 10674260 - 10674168
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||| ||| ||||||    
T  10674260 tccttattataagaaacaattgactttttagattcattatgtaagtgatgtatctaatctatatttataacaagatacattaattattcaatg 10674168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 40234765 - 40234869
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttact 211  Q
    |||||| ||| || ||||||||||||||||||||| ||||||| |||||| ||||  ||||||||||||||||||||||||||||||||||| | |||||    
T  40234765 tactccctccggttcttattataagaaacaattgactttttagattcattgtgtaactgatgtatctagtctatatttacaacaagatacatgaattact 40234864  T
Q  212 caatg 216  Q
    |||||    
T  40234865 caatg 40234869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 45025745 - 45025650
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| | ||| ||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45025745 tatacttcctccggtctttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacatta 45025650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 24164666 - 24164572
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| |||  |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  24164666 atactccctccgatccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttctaacaagatacatta 24164572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 7456429 - 7456522
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||||||| | |||| ||||||| |||||| | ||  ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7456429 gtccttattataagaaatatttgactttttagattcattgtataaatgatgtatctagtctatatttacaacaagatacattaattactcaatg 7456522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 39413978 - 39413874
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| || |||||||||||| ||||||||| |||     
T  39413978 atactccttccagtcctaattataagaaacaattgattttttaagttcattgtataagtgatgtatctaatcaatatttacaacatgatacattaattat 39413879  T
Q  211 tcaat 215  Q
    |||||    
T  39413878 tcaat 39413874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 47484025 - 47484113
Alignment:
Q  117 catcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||| ||||||||||||||||||||||||||||||   ||||||  ||| |||||||||||||||||||||||||| |||||||||||    
T  47484025 catccggtccttattataagaaacaattgattttttttattcattgcgtaagtgatgtatctagtctatatttacaataagatacatta 47484113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 33901189 - 33901094
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| | ||| ||| ||||||||||||||| |||| ||||||| |||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  33901189 tatacttcctccggtctttattataagaaacatttgactttttagattcattatgtaaatgatgtatctagtctatatttataacaagatacatta 33901094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 3633196 - 3633281
Alignment:
Q  118 atcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacat 203  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||| || ||||||||||||||||| ||||| ||| ||||||||    
T  3633196 atccggtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttataacgagatacat 3633281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 47612440 - 47612335
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| |||||||||||||| | ||||||| |||||||||||||| | || || |||||||||||||||||||| ||| |||||||||| |||     
T  47612440 atactccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgagatacattaattat 47612341  T
Q  211 tcaatg 216  Q
    ||||||    
T  47612340 tcaatg 47612335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 29559448 - 29559540
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||||||||||||| |||||||||||||  |||| || |||||||||||||||||||| ||| | |||||||| ||| ||||||    
T  29559448 tccttattataagaaacaattgactttttaggttcatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatg 29559540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 33039572 - 33039652
Alignment:
Q  125 ccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||||||||||||| |||||||||||||| |||  | |||||||||||||||||||||||||| |||||||||    
T  33039572 ccttattaaaagaaacaattgactttttaggttcattgtgttagggatgtatctagtctatatttacaacatgatacatta 33039652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 27320445 - 27320355
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagata 200  Q
    |||||||| ||  |||||||||||||||||||||||||||||| |||||||| | || || |||| |||||||||||||||||| ||||||    
T  27320445 tatactccctctggtccttattataagaaacaattgatttttttggttcattgtataagtaatgtttctagtctatatttacaataagata 27320355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 41088990 - 41088897
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    |||||||||||||||||||||||| |||||||||| ||  |||| || |||||||||||||||||||| ||| | |||||||| ||| ||||||    
T  41088990 gtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatg 41088897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 18064872 - 18064778
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||| ||||||| ||||||||||| ||||  ||||  ||||||| | || |||||||||||||||||||||| ||| |||||||||||    
T  18064872 atactccatccggtccttaatataagaaacagttgacatttttagttcattgtttaagtgatgtatctagtctatattttcaataagatacatta 18064778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 31902963 - 31903053
Alignment:
Q  126 cttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||||||| ||| |||||| ||| ||||||||  ||||||||||||||||||||||  || | |||||||| ||| ||||||    
T  31902963 cttattataagaaacaactgactttttaagtttattatgtaaatgatgtatctagtctatatttatgacgaaatacattaattattcaatg 31903053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 40198742 - 40198660
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||| |||||||||||||| ||| |||||  ||| |||||||| | ||||||| |||||||||||||||||||||| |||||    
T  40198742 gtcctaattataagaaacaaatgacttttttagtttattatgtaagcgatgtatttagtctatatttacaacaagatgcatta 40198660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 41395659 - 41395754
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| |||  ||||||||||||||||||||| | |||||   |||||| | || ||||||||||||||||||||||| || |||||| ||||    
T  41395659 tatactccttccgatccttattataagaaacaattaacttttttaattcattgtataagtgatgtatctagtctatatttataataagatatatta 41395754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 37006450 - 37006548
Alignment:
Q  107 tattatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||| |||  ||| |||||||||||||||||||| |||||  ||| ||| | || |||||||||| ||| ||||||||||| | |||||||||    
T  37006450 tattatactctatcgggtcgttattataagaaacaattgacttttttagtttattgtataagtgatgtatccagtttatatttacaatatgatacatta 37006548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 13860229 - 13860309
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||| || | |||||| ||| ||| ||||  |||||||||||||||||||||| ||||| ||||||||    
T  13860229 tccttattataagaaacattttactttttaagtttattgtgtaa-tgatgtatctagtctatatttataacaatatacatta 13860309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 28248569 - 28248476
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcatta----tgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    |||||| ||||||||||| | |||||||||||||||    |||| ||||||||| ||||||||||||| ||| |||| ||||| ||| ||||||    
T  28248569 ttattacaagaaacaattaactttttaggttcattaattgtgtaagtgatgtatatagtctatatttataacgagatgcattaattattcaatg 28248476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 33901037 - 33901077
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgatttttt 152  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  33901037 tactccctcctgtccttattataagaaacaattgatttttt 33901077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 45123384 - 45123301
Alignment:
Q  122 tgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||| ||||||||||||| |||| | ||||| | |||||| | || |||||||||||| |||||||||| || |||||||||||    
T  45123384 tgtctttattataagaaataattaacttttttgattcattgtataagtgatgtatctaatctatatttataataagatacatta 45123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 14543262 - 14543316
Alignment:
Q  107 tattatactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||||||| ||||||| ||||||||||||||  |||||||||||| ||||||    
T  14543262 tattatactccctcctgtctttattataagaaacttttgattttttagattcatt 14543316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 24164513 - 24164563
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    |||| ||| ||| |||||||||||||||||||||||||||||| |||||||    
T  24164513 tatattccctccggtccttattataagaaacaattgatttttttggttcat 24164563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 45025591 - 45025641
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    |||||||  ||| |||||||||||||||||||||||||||||| |||||||    
T  45025591 tatactcactccggtccttattataagaaacaattgatttttttggttcat 45025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 3633342 - 3633274
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatct 178  Q
    |||||||| ||  ||||||||||||||||| | |||| |||||||||||||| | || |||||||||||    
T  3633342 tatactccttctggtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatct 3633274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 7999489 - 7999540
Alignment:
Q  154 ggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| |||| ||||||||||||||||||||||| ||| |||| |||||    
T  7999489 ggttcattgtgtaagtgatgtatctagtctatatttataacgagatgcatta 7999540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 31903101 - 31903050
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||||||||  |||||||||||| ||| |||| ||||||||||||||||    
T  31903101 tatactccatccaatccttattataaaaaataattaattttttaggttcatt 31903050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 47484173 - 47484122
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||||| |||||||||||||||||| || | |||| |||||||||||||    
T  47484173 ttatactccctcctgtccttattataagtaaaagttgactttttaggttcat 47484122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 12807006 - 12806964
Alignment:
Q  163 tgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||| ||||||||| |||||||||||||||| |||||||||||    
T  12807006 tgtaagtgatgtatgtagtctatatttacaataagatacatta 12806964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 47280188 - 47280265
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||| | ||||| | |||||| | ||  | |||||| |||||||||||||||| |||||||||||    
T  47280188 ttattataagaaacaattaacttttttg-ttcattgtataaataatgtatttagtctatatttacaataagatacatta 47280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 12806906 - 12806955
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  12806906 atactccctccggtccttattataagaaaaagttgactttttaggttcat 12806955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 13860354 - 13860317
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  13860354 tccttattataagaaacaattgactttttagattcatt 13860317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 24932393 - 24932430
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  24932393 gtccttattataagaaaaaattgactttttaggttcat 24932430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 29835099 - 29835187
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||| ||| |||||| ||||||| || ||| ||||  ||||||||||| | |||||||||||| ||||| |||| ||| ||||||    
T  29835099 ttattataaaaaa-aattgactttttagatttattgtgtaaatgatgtatctaatttatatttacaacgagatatattaattattcaatg 29835187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 40600047 - 40599998
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtat 176  Q
    |||||||||| ||||||| | |||||||||||||| |||| |||||||||    
T  40600047 ttattataagcaacaattaactttttaggttcattgtgtaagtgatgtat 40599998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 41088851 - 41088900
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    |||||| ||| |||||||||| ||||||||||||| ||||||| ||||||    
T  41088851 tactccctccggtccttattacaagaaacaattgactttttagattcatt 41088900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 41487789 - 41487838
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  41487789 atactccctccggtccttattataagaaaaagttgactttttaggttcat 41487838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 40198603 - 40198651
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    |||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  40198603 tactccctccggtccttattataagaaaaagttgactttttaggttcat 40198651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 26584 - 26689
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| |||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  26584 atactccctccggtccttattataagaaaggattgactttttaggttcattatgtaagtgatgtatctagtctatatttacaacaagatacattaattac 26683  T
Q  211 tcaatg 216  Q
    ||||||    
T  26684 tcaatg 26689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 26736 - 26686
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||| ||| ||||||||||||||||||  |||||||||||| ||||||    
T  26736 atactccctccggtccttattataagaaacttttgattttttagattcatt 26686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 19998562 - 19998456
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagtta 209  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |||| |||    
T  19998562 tatacttcatccggtccttattataagaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaatta 19998463  T
Q  210 ctcaatg 216  Q
    |||||||    
T  19998462 ctcaatg 19998456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 13321852 - 13321770
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  13321852 gtccttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacatta 13321770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 34174884 - 34174986
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||| ||||||| ||||||||||||||| ||||    
T  34174884 atactccatccgatccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatttagtttatatttgcaacaagatacattaattac 34174983  T
Q  211 tca 213  Q
    |||    
T  34174984 tca 34174986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 15699602 - 15699509
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    |||||||||||| ||||||||||| |||||||||| ||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15699602 gtccttattatatgaaacaattgaatttttaggtttattgtataagtgatgtatctagtctatatttacaacaagatacattaattactcaatg 15699509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 216
Target Start/End: Complemental strand, 31050399 - 31050295
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttact 211  Q
    |||||||||  |||||||||||||||||||||||| |||||||||| ||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||     
T  31050399 tactccatcaagtccttattataagaaacaattgactttttaggtttattgtgtaagtgatgtatttagtctatatttacaacaaaatacattaattaca 31050300  T
Q  212 caatg 216  Q
    |||||    
T  31050299 caatg 31050295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 27687839 - 27687933
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| || |||||||||||||| |||||| |||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  27687839 atactccctccggttcttattataagaaataattgaattttttagttcattatgtaagtgatgtatctagtctatatttacaataagatacatta 27687933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 45977104 - 45977186
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||| | ||||| |||| ||| | ||||||||||||||||||||||||||||| |||||||||||    
T  45977104 gtccttattataagaaacaattaacttttttggtttattgtataggtgatgtatctagtctatatttacaataagatacatta 45977186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 51590580 - 51590486
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| ||||||||||||||||| | ||||  |||||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  51590580 atactccctccggtccttattataagaaaaagttgaccttttagattcattgtgtaagtgatgtatctagtctatatttataacaagatacatta 51590486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 48565679 - 48565587
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatac 201  Q
    ||||||||| ||| ||||||||||||||||| | || | |||||| ||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  48565679 ttatactccctccggtccttattataagaaaaagttaactttttaagttcattgtgtaggtgatgtatttagtctatatttataacaagatac 48565587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 52279244 - 52279326
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||| |||| ||||||||||||| |||||||| |||| |||||||||| ||||||||||||||| |||||| ||||    
T  52279244 gtccttattattagaagcaattgatttttttggttcattgtgtaagtgatgtatcaagtctatatttacaataagatatatta 52279326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 29438269 - 29438194
Alignment:
Q  130 ttataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||| |||||  ||||||| |||| |||||||||||||||||||||| ||| |||||||||||    
T  29438269 ttataagaaacaattgacttttttagttcattgtgtaagtgatgtatctagtctatattttcaataagatacatta 29438194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 52030878 - 52030960
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||| |||||||||||||| |||||  |||| |||||||||||| | |||||||| || |||||||||||    
T  52030878 gtccttattataagaaaaaattgattttttagtttcatcgtgtaagtgatgtatctaatttatatttataataagatacatta 52030960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 13770860 - 13770765
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||| || |||||||||||||||| || | |||||   || ||| |||| |||||||||||||||||||||||||| |||||||||||    
T  13770860 tatactccctccggttcttattataagaaacagtttacttttttaatttattgtgtaagtgatgtatctagtctatatttacaataagatacatta 13770765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 44224419 - 44224325
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| | ||||||||||| ||| |||| ||||||| |||||||| |  | ||||||||||||| |||||||||||| |||||||||||    
T  44224419 atactccgtccggcccttattataaaaaataattaatttttttggttcattgtacaagtgatgtatctagactatatttacaataagatacatta 44224325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 22182764 - 22182857
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| |||||||||||||| ||||||||| ||||||| || ||| |||| ||||||||||||| | ||||||| ||| |||| |||||    
T  22182764 tactccctccggtccttattataagtaacaattgactttttagatttattgtgtaagtgatgtatctagcccatatttataacgagatgcatta 22182857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 18038838 - 18038746
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacat 203  Q
    ||||||| ||| ||||||||||||| ||||| |||| ||||||| |||||| | || |||||||||||| |||| ||||| ||| ||||||||    
T  18038838 atactccctccggtccttattataaaaaacatttgactttttagattcattgtttaagtgatgtatctaatctacatttataacgagatacat 18038746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 5967013 - 5966946
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattta 190  Q
    |||||||||||||||||||| | |||||||||||| ||| ||||  ||||||||||| ||||||||||    
T  5967013 gtccttattataagaaacaaattattttttaggtttattgtgtaattgatgtatctaatctatattta 5966946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 25238725 - 25238674
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  25238725 ttatactccctcctgtccttattataaaaaacaattgactttttaggttcat 25238674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 43850946 - 43851041
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| | ||| ||| ||||||||||||||  |||| ||||||| || |||||||| |||||||||||| | |||||||| ||||||||| ||||    
T  43850946 tatacttcctccggtctttattataagaaacttttgactttttagatttattatgtaagtgatgtatctaatatatatttataacaagatatatta 43851041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 13320300 - 13320395
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||| || ||||||||||||||||||| |||||||  ||| ||| ||||  |||||||| ||  |||||||||||| |||||| ||||    
T  13320300 tatactccctccggttcttattataagaaacaattaattttttttgtttattgtgtaaatgatgtatttaaactatatttacaataagatatatta 13320395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 20486794 - 20486725
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaa 193  Q
    |||||||||||| ||| |||||| |||||||||| ||| |||  ||||| ||||||| ||||||||||||    
T  20486794 tccttattataaaaaataattgactttttaggtttattgtgttagtgatatatctagcctatatttacaa 20486725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 12175507 - 12175543
Alignment:
Q  169 tgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||| ||||||||||||||    
T  12175507 tgatgtatctagtctatatttataacaagatacatta 12175543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 15699462 - 15699512
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||| ||| ||||||||||||||||||  |||||||||||| ||||||    
T  15699462 atactccctccggtccttattataagaaacttttgattttttagattcatt 15699512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 51590427 - 51590477
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    |||||||| ||| ||||||||||||| |||||||||| ||||| |||||||    
T  51590427 tatactccctccggtccttattataaaaaacaattgacttttttggttcat 51590477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 22182913 - 22182865
Alignment:
Q  113 actccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||| ||| |||||||||||||| ||||||||| |||||| |||||||    
T  22182913 actccctccggtccttattataagcaacaattgactttttaagttcatt 22182865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 43292719 - 43292624
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||  ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  43292719 tatactccatctggtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataacaagatacatta 43292624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 34604933 - 34604837
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||||||| | || |||||||||||||||||||||||||| |||||||||||    
T  34604933 ttatactccctccggtccttattataagaaacaattgatttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacatta 34604837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 34745391 - 34745313
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  34745391 ttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacatta 34745313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 40645720 - 40645802
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  40645720 gtccttattataagaaacatttgactttttaagttcattatgtaagtgatgtatctagtctatatttataacaagatacatta 40645802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 43932047 - 43932152
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||||||||| |  |  ||||||||||| |||||||||| |||||||||||||| |||     
T  43932047 atactccctccggtccttattataagaaacaattgactttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaattat 43932146  T
Q  211 tcaatg 216  Q
    ||||||    
T  43932147 tcaatg 43932152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 35584034 - 35583939
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||| |||||||||||||||||||||| | ||||| |||||||| | || |||||||||||| ||||||||||||| |||||||||||    
T  35584034 tatactccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacatta 35583939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 7548496 - 7548589
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| |||||||||||||||||||||| ||||||| |||||||| |||| ||||||||| ||| |||||||||||| ||||| |||||    
T  7548496 tactccctccggtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatgcatta 7548589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 9550107 - 9550211
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| ||| ||||||||||||| |||||||||||||  ||||||  ||| |||||||||||||||||||||||  || ||||||||||||||     
T  9550107 atactccctccggtctttattataagaaataattgattttttaaattcattgggtaagtgatgtatctagtctatatttattacgagatacattagttat 9550206  T
Q  211 tcaat 215  Q
    |||||    
T  9550207 tcaat 9550211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 45372856 - 45372761
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||| |||||||||||||| ||||||||| ||||| | |||| | |||| |||||||||||||||||||||| ||| |||||||||||    
T  45372856 tatactccctccggtccttattataagtaacaattgacttttttgattcaatgtgtaagtgatgtatctagtctatattttcaataagatacatta 45372761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 13831885 - 13831967
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||| | ||||| |||||||| | || ||||||||| |||||||||||||||| |||||||||||    
T  13831885 gtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatatagtctatatttacaataagatacatta 13831967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 29690574 - 29690492
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||| | ||||| |||||||| | || ||||||||||||||||||||||| || |||||||||||    
T  29690574 gtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttataataagatacatta 29690492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 43409832 - 43409937
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| |||||||||||||| | ||||||| |||||||||||||| | || || |||||||||||||||||||| ||| || ||||||| |||     
T  43409832 atactccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgaggtacattaattat 43409931  T
Q  211 tcaatg 216  Q
    ||||||    
T  43409932 tcaatg 43409937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 38298517 - 38298604
Alignment:
Q  129 attataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||| |||||| |||||| ||||||| |||| ||||||||||||| ||||||||| ||| |||||||||| ||| ||||||    
T  38298517 attataagaaataattgactttttaagttcattgtgtaagtgatgtatctagcctatatttataacgagatacattaattattcaatg 38298604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 38494374 - 38494295
Alignment:
Q  126 cttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||| ||||||||||||||||| ||| |||| ||| |||||||| | |||||||| ||||||||||||||    
T  38494374 cttattataagaaaaaattgattttttaggtttattgtgtaagtggtgtatctaatttatatttataacaagatacatta 38494295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 9633219 - 9633137
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| |||||||||||| |||| |||||| ||||||| ||||    |||||||||||||||||||| ||||||||||||||    
T  9633219 gtccttcttataagaaacatttgactttttaagttcattgtgtaaacaatgtatctagtctatatttataacaagatacatta 9633137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 45180173 - 45180111
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattt 189  Q
    ||||||||| |||||||||| ||||| |||||||| |||| ||||||||||||||||||||||    
T  45180173 ttattataaaaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatattt 45180111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 41624752 - 41624840
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaat 215  Q
    |||||||||||||||  ||| ||||||||||| |||| || ||||||||| ||||||||||||| ||||| |||| ||| ||| |||||    
T  41624752 ttattataagaaacatatgactttttaggttccttatataagtgatgtatttagtctatatttataacaacatacgttaattattcaat 41624840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 44579891 - 44579985
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| || ||| |||||||||||||||||| | ||||| | || ||| | || || || |||||||||||||||||||| |||||||||||    
T  44579891 atactccaaccagtctttattataagaaacaattaacttttttgatttattgtataagtaatatatctagtctatatttacaataagatacatta 44579985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 24599807 - 24599714
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    |||||||| ||||||||||||||||||||||| |||||| | ||  |||||||||||  ||||||||| ||  | |||||||| ||| ||||||    
T  24599807 gtccttataataagaaacaattgattttttagattcattgtataactgatgtatctaacctatatttataatgaaatacattatttattcaatg 24599714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 27108000 - 27108076
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagata 200  Q
    ||||||||||||||||||||||   ||||| ||||||||||||  ||||||||||| ||| |||||| ||| |||||    
T  27108000 tccttattataagaaacaattgtcattttatgttcattatgtaaatgatgtatctaatctgtatttataacgagata 27108076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 43292563 - 43292615
Alignment:
Q  108 attatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||| |||||||    
T  43292563 attatactccctccggtccttattataagaaacaattgacttttttggttcat 43292615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 9420585 - 9420688
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| |||||||||||||| | |||||||  |||||| |||||| | || || |||||||| ||||||||||| ||| || ||||||| |||     
T  9420585 atactccctccggtccttattataagcagcaattgacgttttagattcattgtataagtaatgtatctggtctatatttataacgaggtacattaattat 9420684  T
Q  211 tcaa 214  Q
    ||||    
T  9420685 tcaa 9420688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 43932199 - 43932149
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||| ||||||    
T  43932199 atactccctccggtccttattataagaaacaattgactttttagattcatt 43932149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 34745255 - 34745304
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| |||||||||||||||||||||||| ||||| |||||||    
T  34745255 atactccctccggtccttattataagaaacaattgacttttttggttcat 34745304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 13832027 - 13831976
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  13832027 ttatactccctccggtccttattataagaaaaagttgactttttaggttcat 13831976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 30734528 - 30734583
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatct 178  Q
    |||||||||||||||||||| | ||||||||| |||||| ||||  ||||||||||    
T  30734528 gtccttattataagaaacaaattattttttagattcattgtgtaattgatgtatct 30734583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 161
Target Start/End: Complemental strand, 38298632 - 38298601
Alignment:
Q  130 ttataagaaacaattgattttttaggttcatt 161  Q
    ||||||||||||||||||||||||||||||||    
T  38298632 ttataagaaacaattgattttttaggttcatt 38298601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 34604779 - 34604828
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  34604779 atactccctccggtccttattataagaaaaagttgactttttaggttcat 34604828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 33615929 - 33615824
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| ||||||||||||| |||||||||| ||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  33615929 atactccctccggtccttattataaaaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattac 33615830  T
Q  211 tcaatg 216  Q
    ||||||    
T  33615829 tcaatg 33615824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 54673449 - 54673355
Alignment:
Q  122 tgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||| ||| ||||||    
T  54673449 tgtccttattataagaaacaattgactttttaggttcattatgtaagtgatgtatctagtctatatttataacgagatgcattacttattcaatg 54673355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 29686398 - 29686492
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| ||||||||||||||||||| |||| |||||||||||||| ||||  |||||||||||||||||||||| ||||| ||||||||    
T  29686398 atactccctccggtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctagtctatatttataacaatatacatta 29686492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 33622878 - 33622972
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| |||||||||||||||||||||| | ||||| |||||||| | ||||||||||||||||| ||||||||||| |||||||||||    
T  33622878 atactccctccggtccttattataagaaacaattaacttttttggttcattgtataggtgatgtatctagtttatatttacaataagatacatta 33622972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 4418246 - 4418153
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||| |||||||| ||||| ||||||||    
T  4418246 tactccctccggtccttattataagaaaaaattgattttttaggttcattgtgtaagtgatgtatttagtttatatttataacaaaatacatta 4418153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 36196364 - 36196457
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| |||||||||||||||||||||||||||||| |||||||| | || ||||||||| ||||||| |||||||| |||||||||||    
T  36196364 tactccctccggtccttattataagaaacaattgatttttttggttcattttataagtgatgtatatagtctacatttacaataagatacatta 36196457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 52136698 - 52136791
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| ||||||||||||||||| |||| | |||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||    
T  52136698 tactccctccggtccttattataagaaaaaattaactttttaggttcattgtgtaagtgatgtatttagtctatatttataacaagatacatta 52136791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 54864216 - 54864120
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||||| |||||||| | || |||||||||||||||||||||||||| |||||||||||    
T  54864216 ttatattccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacatta 54864120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 31853201 - 31853123
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||| | |||| |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  31853201 ttattataagaaaaatttgactttttaggttcattgtgtaagtgatgtatctagtctatatttataacaagatacatta 31853123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 43556689 - 43556783
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| ||||||||||||||||||||||||||||||  |||| || |||| |||| |||||||||||| |||||||| |||||||||||    
T  43556689 atactccctccggtccttattataagaaacaattgatttttttagttcgttgtgtaagtgacgtatctagtctacatttacaataagatacatta 43556783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 25756711 - 25756804
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||||| | |||| |||||||||||||||| |||||| ||| ||||||||||    
T  25756711 tactccctccggtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacatta 25756804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 25874849 - 25874756
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| ||||||||||||||||| |||| ||||||| |||||||| | || |||||||||||||||||||||||||| || ||||||||    
T  25874849 tactccctccggtccttattataagaaagaattaatttttttggttcattgtataagtgatgtatctagtctatatttacaataaaatacatta 25874756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 32193474 - 32193551
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattt 189  Q
    |||||| ||| |||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||    
T  32193474 tactccctccggtccttattataagaaacaattgacttttttggttcattatgtaagtaatgtatctagtctatattt 32193551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 35877451 - 35877370
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||||| ||||||| |||||||| |||| ||||||||| ||| |||||||||||| |||||||||||    
T  35877451 tccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatacatta 35877370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 37895254 - 37895347
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| ||||||||||||||||||| |||||||||| |||||||| | || ||||||||||||||||| |||||||| || ||||||||    
T  37895254 tactccctccggtccttattataagaaacagttgatttttttggttcattgtataagtgatgtatctagtctacatttacaataaaatacatta 37895347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 28460881 - 28460797
Alignment:
Q  126 cttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||||||||||||||||  ||||||| |||||||| || ||||||||| ||||||||||||||||||||||| |||| ||||    
T  28460881 cttattataagaaacaattggctttttagattcattatataagtgatgtatttagtctatatttacaacaagataaattaattac 28460797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 35929143 - 35929066
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| || |||||||||||    
T  35929143 ttattataagaaacaattgatttttt-ggttcattgtgtaagtgatgtatctaatctatatttataataagatacatta 35929066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 42160107 - 42160029
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||| |||| |||||||  |||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  42160107 ttattataagaaacatttgactttttagaatcattatgtaagtgatgtatttagtctatatttataacaagatacatta 42160029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 43141776 - 43141858
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||| | ||||| |||||||| | || |||||||||||| ||||||||||||| |||||||||||    
T  43141776 gtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacatta 43141858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 27587256 - 27587349
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    |||||||||||||||||||||||| ||||||| || ||||| ||  ||||||||||||| |||||||| ||| |||||||||| ||| ||||||    
T  27587256 gtccttattataagaaacaattgactttttagatttattatataaatgatgtatctagtgtatatttataacgagatacattaattattcaatg 27587349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 7086280 - 7086189
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacat 203  Q
    |||||| ||| ||||||||||||||||||| |||| |||||||||||||| | || ||||||||||| ||||| ||||| ||| ||||||||    
T  7086280 tactccttccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgtatctggtctacatttataacgagatacat 7086189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 8347501 - 8347584
Alignment:
Q  123 gtccttattataagaaacaattgatttttta-ggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||| ||||||||||  |||||||| | ||  ||||||||||||||||||||||||| |||||||||||    
T  8347501 gtccttattataagaaacatttgattttttttggttcattgtataaatgatgtatctagtctatatttacaataagatacatta 8347584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 56491072 - 56491175
Alignment:
Q  113 actccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactc 212  Q
    ||||| ||| |||||||||||||| | ||||||| |||||||||||||| | || || |||||||||||||||||||| ||| || ||||||| ||| ||    
T  56491072 actccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgaggtacattaattattc 56491171  T
Q  213 aatg 216  Q
    ||||    
T  56491172 aatg 56491175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 1205216 - 1205138
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||| |||||||||||||  |||||| | || ||||||||||||||||||||||| || |||||||||||    
T  1205216 ttattataagaaaaaattgattttttatattcattgtctaagtgatgtatctagtctatatttataataagatacatta 1205138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 22019932 - 22020026
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||| |||||||||||||| ||||||| | ||||||| |||||| |||| ||||||| |||| |||||||||| ||| |||| |||||    
T  22019932 atactccatccggtccttattataagtaacaattaactttttagattcattctgtaagtgatgtgtctaatctatatttataacgagatgcatta 22020026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 50511259 - 50511337
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||| | ||||| |||||||| |||| ||||||||| ||| |||||||||||| |||||||||||    
T  50511259 ttattataagaaacaattaacttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatacatta 50511337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 40592726 - 40592804
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||| | ||||| | |||||| | || |||||||||||||| |||||||| ||||||||||||||    
T  40592726 ttattataagaaacaattaactttttggattcattgtataagtgatgtatctagtttatatttataacaagatacatta 40592804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 52966409 - 52966487
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||| | |||| |||||| ||||||| | || ||||||||||||||||||||||| |||||||| |||||    
T  52966409 ttattataagaaaaatttgactttttaagttcattgtataagtgatgtatctagtctatatttataacaagatgcatta 52966487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 1100906 - 1100967
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtcta 184  Q
    ||||||||||||||||||| |||| |||||||||||||| | || |||||||||||||||||    
T  1100906 gtccttattataagaaacatttgactttttaggttcattgtttaagtgatgtatctagtcta 1100967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 9813449 - 9813548
Alignment:
Q  108 attatactccatcctgtccttattataagaaacaattga--ttttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||| ||  ||| |||||||||  ||||||||   ||||||||||||||| |||| ||||||||||||||||||||||| ||| |||| |||||    
T  9813449 attatactccctctagtctttattataatcaacaattgtacttttttaggttcattgtgtaagtgatgtatctagtctatatttataacgagatgcatta 9813548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 38208400 - 38208321
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattt 189  Q
    |||||||| ||| ||||||| ||||||||||||||||  ||||  ||||||| | || ||||||||||||||||||||||    
T  38208400 tatactccctccggtccttaatataagaaacaattgacatttttagttcattgtttaagtgatgtatctagtctatattt 38208321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 25756866 - 25756812
Alignment:
Q  107 tattatactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||| |||||||    
T  25756866 tattatactccctccggtccttattataagaaacaattgactttttatgttcatt 25756812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 24100876 - 24100804
Alignment:
Q  141 aattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    |||||||||||||| |||||| || |  |||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  24100876 aattgattttttagattcatt-tgaa--tgatgtatctagtctatatttataacaagatacattaattattcaatg 24100804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 19350626 - 19350688
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattta 190  Q
    |||||||||||||||||| ||||||| |||||||| |||| |||| ||||||||||| ||||||    
T  19350626 ttattataagaaacaattaatttttttggttcattgtgtaagtga-gtatctagtctttattta 19350688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 50511398 - 50511468
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaa 193  Q
    ||||||||||||||||||| |||| |||||  ||||||| |||| | ||||| |||||| |||||||||||    
T  50511398 gtccttattataagaaacacttgacttttttagttcattgtgtaagggatgtgtctagtttatatttacaa 50511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 22210911 - 22210870
Alignment:
Q  126 cttattataagaaacaattgattttttaggttcattatgtag 167  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  22210911 cttattataagaaacaatttattttttaggttcattgtgtag 22210870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 36196515 - 36196466
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||| |||||    
T  36196515 atactccctccggtccttattataagaaaaaattgattttttagattcat 36196466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 1140978 - 1140910
Alignment:
Q  148 tttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||| |||||| |||| ||||||||||| ||||||||||| ||||| |||||| | ||| ||||||    
T  1140978 tttttagattcattgtgtaagtgatgtatctggtctatatttataacaaaatacatcaattattcaatg 1140910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 54864060 - 54864111
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  54864060 ttatactccctccggtccttattataagaaaaagttgactttttaggttcat 54864111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 29686550 - 29686508
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgatttttta 153  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||    
T  29686550 atactccctccggtccttattataagaaacaattaatttttta 29686508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 152
Target Start/End: Complemental strand, 52136838 - 52136808
Alignment:
Q  122 tgtccttattataagaaacaattgatttttt 152  Q
    |||||||||||||||||||||||||||||||    
T  52136838 tgtccttattataagaaacaattgatttttt 52136808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 54673320 - 54673358
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  54673320 gtccttattataagaaacatttgactttttaggttcatt 54673358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 152
Target Start/End: Original strand, 4418107 - 4418136
Alignment:
Q  123 gtccttattataagaaacaattgatttttt 152  Q
    ||||||||||||||||||||||||||||||    
T  4418107 gtccttattataagaaacaattgatttttt 4418136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 27587383 - 27587346
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcatt 161  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  27587383 tccttattataagaaataatttattttttaggttcatt 27587346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 33615778 - 33615827
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    |||||| ||| ||||||||||||||||||  |||||||||||| ||||||    
T  33615778 tactccctccggtccttattataagaaacttttgattttttagattcatt 33615827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 52966533 - 52966496
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcat 160  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  52966533 gtccttattataagaaacaattgacttttttggttcat 52966496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 8347641 - 8347593
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    |||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  8347641 tactccctccggtccttattataagaaaaagttgactttttaggttcat 8347593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 36132633 - 36132741
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| |||||  |||||||||| | |||| ||||| | |||||| | ||  |||||||| ||||||||||| |  ||||||||||| |  |||    
T  36132633 atactccctccagtcctatttataagaaatatttgacttttttgattcattgtataaatgatgtatttagtctatattcaagacaagatacatcaactac 36132732  T
Q  211 tcaatgtat 219  Q
    |||||||||    
T  36132733 tcaatgtat 36132741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 43556840 - 43556792
Alignment:
Q  113 actccatcctgtccttattataagaaacaa-ttgattttttaggttcat 160  Q
    ||||| ||| ||||||||||||||||| || ||||||||||||||||||    
T  43556840 actccctccggtccttattataagaaaaaaattgattttttaggttcat 43556792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 50511471 - 50511519
Alignment:
Q  157 tcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||| |||| | |||||||||||| ||||||||||| |||||||||||    
T  50511471 tcattgtgtaagggatgtatctagtttatatttacaataagatacatta 50511519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 31376173 - 31376267
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||    
T  31376173 atactccctccggtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataagaagatacatta 31376267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 39616910 - 39617003
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| ||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  39616910 tactccctccggtccttattataagaaacatttgacttttaaggttcattatgtaagtgatgtatctagtctatatttataacaagatacatta 39617003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 45113745 - 45113826
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  45113745 tccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacatta 45113826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 53703882 - 53703786
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaa-ttgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||| ||||||||||||||||| || ||||  ||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  53703882 tatactccctccggtccttattataagaaaaaagttgaccttttaggttcattgtgtaagtgatgtatctagtctatatttataacaagatacatta 53703786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 36191615 - 36191533
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||  | ||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  36191615 gtccttattataagaattatttgatcttttaggttcattatgtaagtgatgtatctagtctatatatataacaagatacatta 36191533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 48346447 - 48346553
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagtta 209  Q
    |||||||| ||| || |||||||||| ||||  |||| |||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||    
T  48346447 tatactccctcccgttcttattataaaaaacttttgactttttaagtttattatgtaagtgatgtatctagtctatatttataacaagatacattaatta 48346546  T
Q  210 ctcaatg 216  Q
    || ||||    
T  48346547 cttaatg 48346553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 53284454 - 53284372
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||||||||||| |||| ||| | || ||||||||||||||||| |||||||| |||||||||||    
T  53284454 gtccttattataagaaacaattgatttttttggtttattgtataagtgatgtatctagtctacatttacaataagatacatta 53284372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 27363171 - 27363264
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||||||||  |||||||||||| |||| |||||| |||||||||||| |||||||||| |||||||||| ||| ||||| ||||    
T  27363171 gtccttattataagaaacttttgattttttagattcaatatgtaagtgatgtatctaatctatatttataacaagatacgttaattacttaatg 27363264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 48643614 - 48643707
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    |||||||||||||||||||||||| |||||||||| ||  |||| || |||||||||||||||||||| ||| | |||||||| ||| ||||||    
T  48643614 gtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatg 48643707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 25313288 - 25313364
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagat 199  Q
    ||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||| ||||    
T  25313288 gtccttattataaaaaataattgattttttaggttcattgtgtaagtgatgtatttagtctatatttataacgagat 25313364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 8764382 - 8764288
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| |||  |||||||||||||||| | ||||||||||| ||| ||| |||| |||||||||||| |||||||||| ||||||||||||||    
T  8764382 tatactccctccgatccttattataagaaa-agttgattttttaagtttattgtgtaagtgatgtatctaatctatatttataacaagatacatta 8764288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 8769284 - 8769190
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||| ||||||||||||||||| | || | |||||| ||||||| |||| |||||||||||| |||||||||| ||||||||||||||    
T  8769284 tatactccctccggtccttattataagaaa-agttaactttttaagttcattgtgtaagtgatgtatctaatctatatttataacaagatacatta 8769190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 43901719 - 43901637
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||| | ||||| |||||||| ||||  ||||||| ||||||||||||| ||| |||||||||||    
T  43901719 gtccttattataagaaacaattaacttttttggttcattgtgtaaatgatgtacctagtctatattttcaataagatacatta 43901637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 50100206 - 50100282
Alignment:
Q  125 ccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatac 201  Q
    |||||||||||||||||||||| |||||  ||||||| | || ||||||||||||||||||||||| || |||||||    
T  50100206 ccttattataagaaacaattgacttttttagttcattgtataagtgatgtatctagtctatatttataataagatac 50100282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 16123894 - 16123812
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||| |||||||| | ||||| |||||||| | || || ||||||||||||||||||||||| |||||| ||||    
T  16123894 gtccttattataaaaaacaattaacttttttggttcattgtataagtaatgtatctagtctatatttacaataagatatatta 16123812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 19227326 - 19227400
Alignment:
Q  131 tataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||| |||| |||||| ||| ||||||||  |||||||||||||||||||||| ||||||||| ||||    
T  19227326 tataagaaacatttgactttttaagtttattatgtaaatgatgtatctagtctatatttataacaagataaatta 19227400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 24489323 - 24489405
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||| ||| |||||| |||||  ||| ||| ||||||||||||||||||| ||||||||| | |||||||||||    
T  24489323 gtccttattataaaaaataattgacttttttagtttattttgtaggtgatgtatctagtttatatttactataagatacatta 24489405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 27302093 - 27302171
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||| |||| | ||||| |||||||| | || ||||||||||||||||||||||||||  ||||||||||    
T  27302093 ttattataagaaagaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaattagatacatta 27302171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 21944418 - 21944345
Alignment:
Q  132 ataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||||| ||||| || |||| ||| |||||||||||||||| ||||  |||||||||||    
T  21944418 ataagaaacaattgatttttttggttccttgtgtaagtggtgtatctagtctatatctacactaagatacatta 21944345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 50659959 - 50660015
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatcta 179  Q
    ||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||    
T  50659959 gtccttattattagaaacaattgatttttttggttcattgtgtaagtgatgtatcta 50660015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 2544606 - 2544503
Alignment:
Q  114 ctccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctat-atttacaacaagatacattagttactc 212  Q
    |||| ||| |||||||||| ||||||||||||| ||||||| |||||| | || ||||||||| | |||||| ||||| |||||||||||| | ||| ||    
T  2544606 ctccctccggtccttattacaagaaacaattgactttttagattcattgtataagtgatgtatttggtctataatttataacaagatacatcaattattc 2544507  T
Q  213 aatg 216  Q
    ||||    
T  2544506 aatg 2544503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 44118197 - 44118275
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| |||| | |||| ||||||| |||||| ||||  |||||||||||||||||||||| ||||| ||||||||    
T  44118197 ttattataggaaatatttgactttttagattcattgtgtaaatgatgtatctagtctatatttataacaatatacatta 44118275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 2544436 - 2544485
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  2544436 tactccctccggtccttattataagaaacaattgactttttaggttcatt 2544485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 19227458 - 19227409
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  19227458 atactccctccggtccttattataagaaacaattgatttttttggttcat 19227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 19899751 - 19899687
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatat 187  Q
    ||||||||||||| |||||||||| | | |||||||||| ||||  |||||||||||||||||||    
T  19899751 gtccttattataaaaaacaattgactctataggttcattgtgtaaatgatgtatctagtctatat 19899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 21944291 - 21944336
Alignment:
Q  115 tccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||||||||||||||||| |||||| |||||||||||||    
T  21944291 tccatccggtccttattataagaaaaaattgactttttaggttcat 21944336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 46220365 - 46220406
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgatttttta 153  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  46220365 tactccatccggtccttattataagaaaaaattgatttttta 46220406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 53703728 - 53703777
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| |||||||||||||||||||||||| ||||| |||||||    
T  53703728 atactccctccggtccttattataagaaacaattgacttttttggttcat 53703777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 27330036 - 27330112
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatat 187  Q
    ||||||| |||  |||||||||||||||||  |||| |||||||||| | ||| || |||||| |||||||||||||    
T  27330036 atactccctccgatccttattataagaaacttttgactttttaggtttagtatatatgtgatgaatctagtctatat 27330112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 44118321 - 44118281
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattat 163  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  44118321 gtccttattataagaaacaattgactttttagattcattat 44118281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 45113886 - 45113835
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  45113886 ttatactccctccggtccttattataagaaaaagttgactttttaggttcat 45113835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 31376326 - 31376276
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    |||||||| ||| |||||||||| ||||||||||||| ||||| |||||||    
T  31376326 tatactccctccggtccttattacaagaaacaattgacttttttggttcat 31376276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 39617066 - 39617012
Alignment:
Q  106 ctattatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    |||| ||||||| ||| |||||||||| ||||||||||||| ||||| |||||||    
T  39617066 ctataatactccctccggtccttattacaagaaacaattgacttttttggttcat 39617012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 48643753 - 48643704
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    |||||| ||| |||||||||| ||||||||||||| ||||||| ||||||    
T  48643753 tactccctccagtccttattacaagaaacaattgactttttagattcatt 48643704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 36191485 - 36191521
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  36191485 tccttattataagaaacaattgacttttttggttcat 36191521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 45746593 - 45746517
Alignment:
Q  139 acaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaat 215  Q
    |||||||| ||||||  |||| | |||| |||||| |||||||||||||||| ||| ||||| |||| ||| |||||    
T  45746593 acaattgactttttatattcaatgtgtaagtgatggatctagtctatatttataacgagatatattaattattcaat 45746517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 40200 - 40294
Alignment:
Q  123 gtccttattataagaaacaa-ttgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||| ||| || ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  40200 gtccttattataaaaaaaaaattgattttttaggttcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaattactcaatg 40294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 20502225 - 20502143
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  20502225 gtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacatta 20502143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 7537172 - 7537077
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||| ||||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||| ||||||||| | |||||||||||    
T  7537172 tatactccctccggtccttattataaaaaacaattgatttttttggttcattgtgtaagtgatgtatctagtatatatttacgataagatacatta 7537077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 29452042 - 29451949
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| |||  ||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||||||||||| |||||||||||    
T  29452042 atactccctccgatccttattataagaaacaattgatttttt-ggttcattgtgtaagtgatgtatctagtatatatttacaataagatacatta 29451949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 38978879 - 38978798
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| ||||    
T  38978879 tccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatatatta 38978798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 24173417 - 24173512
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||  ||||||| |||| |||||||||||| ||||||||| ||| |||||||||||    
T  24173417 tatactccctccagtccttattataagaaataattgatttttttagttcattgtgtaagtgatgtatctaatctatattttcaataagatacatta 24173512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 27600907 - 27600814
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||  |||||||||||||||| |||||||||||| | |||||| |||| ||||| |||||| ||||||||||||| |||||||||||    
T  27600907 tactccatccgatccttattataagaaataattgatttttttgattcattgtgtaagtgatttatctaatctatatttacaataagatacatta 27600814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 5355701 - 5355607
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| ||||||||||||||||||| |||| |||||  ||||||| |||| ||||||||| |||| ||||||||||| |||||||||||    
T  5355701 atactccctccggtccttattataagaaacagttgacttttttagttcattgtgtaagtgatgtatttagtttatatttacaataagatacatta 5355607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 13932599 - 13932517
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||| |||||| |||||||||||| | |||| |||||||||||||||| |||||| ||| ||||||||||    
T  13932599 gtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacatta 13932517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 19211381 - 19211325
Alignment:
Q  160 ttatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19211381 ttatgtaagtgatgtatctagtctatatttacaacaagatacattaattactcaatg 19211325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 33247289 - 33247384
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||| ||| ||||||||||||||| |||||| | ||||| |||||||| | || ||||| |||||||||||||||||||| |||||| ||||    
T  33247289 tatactccctccggtccttattataagagacaattaacttttttggttcattctataagtgatatatctagtctatatttacaataagatatatta 33247384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 9630245 - 9630327
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||||| ||||||| |||||||| |||| ||||| ||| |||  ||||||||||| |||||||||||    
T  9630245 gtccttattataagaaacaattaatttttttggttcattgtgtaagtgatatatttagattatatttacaataagatacatta 9630327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 35205057 - 35204979
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||| |||||  ||||||| |||| | ||||||||||| |||||||||||| |||||||||||    
T  35205057 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacatta 35204979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 35212102 - 35212180
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||||||||||||| |||||  ||||||| |||| | ||||||||||| |||||||||||| |||||||||||    
T  35212102 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacatta 35212180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 29002753 - 29002818
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattt 189  Q
    ||||| ||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||    
T  29002753 tccttgttataagaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatattt 29002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 32455139 - 32455231
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||| ||| |||||| ||||||||||  ||||| ||||| | |||||| || | |||||||||||||||||||||||||| |||||||||||    
T  32455139 atactccctccggtccttgttataagaaa--attgacttttttgattcattgtggaagtgatgtatctagtctatatttacaataagatacatta 32455231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 29874315 - 29874393
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattt 189  Q
    ||||||| ||| || |||| |||||||||||||||| ||||| |||||||| | || ||||||||||||||||||||||    
T  29874315 atactccctccggttcttaatataagaaacaattgacttttttggttcattgtttaagtgatgtatctagtctatattt 29874393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 73782 - 73887
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    ||||||| ||| ||||||||||||| |||||||||| ||||||| |||||| ||||  ||||||||||| ||| | |||| ||| ||||| |||| |||     
T  73782 atactccctccggtccttattataaaaaacaattgactttttagattcattgtgtaaatgatgtatctactctttgtttataacgagatatattaattat 73881  T
Q  211 tcaatg 216  Q
    ||||||    
T  73882 tcaatg 73887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 13279024 - 13278942
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||| |||| ||||||| || ||| |||| |||||||||||| | |||||||| ||| |||| |||||    
T  13279024 gtccttattataagaaacagttgactttttagatttattgtgtaagtgatgtatctaatttatatttataacgagatgcatta 13278942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 8680690 - 8680627
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgta 175  Q
    |||||| ||| ||||||||||||||||||| |||| |||||||||||||| | || ||||||||    
T  8680690 tactccctccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgta 8680627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 73936 - 73884
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||| |||||||||    
T  73936 ttatactccctccggtctttattataagaaacaattgacttttcaggttcatt 73884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 4527722 - 4527778
Alignment:
Q  130 ttataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctata 186  Q
    |||| |||||||||||| |||||| ||| ||| |||| |||||||||||||||||||    
T  4527722 ttattagaaacaattgactttttaagtttattgtgtaagtgatgtatctagtctata 4527778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 29451888 - 29451940
Alignment:
Q  108 attatactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    |||||||||| ||| ||||||||||||||||| | |||||||||||| |||||    
T  29451888 attatactccctccggtccttattataagaaaaagttgattttttagattcat 29451940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 13932460 - 13932509
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    |||||| ||| |||||| ||||||||||||||||| |||||| |||||||    
T  13932460 tactccctccggtccttgttataagaaacaattgactttttatgttcatt 13932509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 29002891 - 29002846
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggtt 157  Q
    |||||| || |||||||||||||||||| | |||||||||||||||    
T  29002891 tactccctcatgtccttattataagaaaaagttgattttttaggtt 29002846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 13128327 - 13128239
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaat 215  Q
    ||||||||  ||| || ||||||||||| ||  || |||| |||||| |||||||||||||||| ||| ||||| |||| ||| |||||    
T  13128327 ttattatataaaataactgattttttagattttttgtgtaagtgatgcatctagtctatatttataacgagatatattaattattcaat 13128239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 9373403 - 9373497
Alignment:
Q  122 tgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||| ||||||||||||||||| |||||| ||| |||||||| ||||||||| |||||||||||||||||||||||| ||| ||| ||||||    
T  9373403 tgtccttgttataagaaacaattgagtttttaagtttattatgtaagtgatgtatgtagtctatatttacaacaagatacgttaattattcaatg 9373497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 15239703 - 15239784
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||| |||||| ||||    
T  15239703 tccttattataagaaacaattgattttgttggttcattgtgtaagtgatgtatctagtctatatttacaataagatatatta 15239784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 6971712 - 6971626
Alignment:
Q  119 tcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||  ||||||||||| |||||||||| ||||| ||||||||    
T  6971712 tcctgtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctaatctatatttataacaatatacatta 6971626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 40534523 - 40534605
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||||||||||||||  ||||||| | ||  ||||||||||||||||||||||||| |||||||||||    
T  40534523 gtccttattataagaaacaattgatttttttagttcattgtataaatgatgtatctagtctatatttacaataagatacatta 40534605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 28143753 - 28143837
Alignment:
Q  123 gtccttattata--agaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||  |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| || |||||||||||    
T  28143753 gtccttattatattagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttataataagatacatta 28143837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 41464844 - 41464759
Alignment:
Q  131 tataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| |||||||||| ||| ||||||    
T  41464844 tataaaaaataattgattttttaggttcattgtgtaagtgatgtatctagtctatatttataacgagatacattaattattcaatg 41464759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 27306859 - 27306756
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttac 210  Q
    |||||||||||  || |||||||||||||||||||||||||| |||| ||| |||| ||   ||||||||||||||||||||| ||||||||||| |||     
T  27306859 atactccatccgatcattattataagaaacaattgatttttttggtttattgtgtaagtc--gtatctagtctatatttacaataagatacattaattat 27306762  T
Q  211 tcaatg 216  Q
    ||||||    
T  27306761 tcaatg 27306756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 45076480 - 45076398
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||| |||||||||| ||||| |||||||| |||| |||||||||||||||||||| ||||| || ||||||||    
T  45076480 gtccttattataaaaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatatgtacaataaaatacatta 45076398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 25795248 - 25795341
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    |||||||||||||||||||||||| |||||||||| ||  |||| || |||||||||||||||||||| ||| | |||||||| ||| ||||||    
T  25795248 gtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatg 25795341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 27311590 - 27311679
Alignment:
Q  126 cttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaat 215  Q
    ||||||||||||||||||||| |||||||||||||| |  |  |||| ||||||||||||||||| |||||||||| ||| ||| |||||    
T  27311590 cttattataagaaacaattgactttttaggttcattgtacaaatgatatatctagtctatatttataacaagatacgttaattattcaat 27311679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 36103392 - 36103485
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| ||| ||||||||||||| |||||||| |  ||||  ||||||| |||| ||||||||||||| |||||||||||| |||||||||||    
T  36103392 tactccctccggtccttattataataaacaattaacatttttagttcattgtgtaagtgatgtatctagactatatttacaataagatacatta 36103485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 3365289 - 3365378
Alignment:
Q  127 ttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||||||||| | || | |||||||||||||| | || |||||||||||| |||||||||| ||||||||| |||| ||| ||||||    
T  3365289 ttattataagaaaaatttaactttttaggttcattgtataagtgatgtatctaatctatatttataacaagatatattaattattcaatg 3365378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 11687486 - 11687577
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaat 215  Q
    ||||||||||||||||||||||| ||| ||  || ||| |||| ||||||||||||||||||||||| ||| || || |||| ||| |||||    
T  11687486 tccttattataagaaacaattgactttataaatttattgtgtaagtgatgtatctagtctatatttataacgagttatattaattattcaat 11687577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 45076340 - 45076389
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  45076340 atactccctccggtccttattataagaaaaaattgattttttaggttcat 45076389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 38448948 - 38449024
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagat 199  Q
    |||||||| |||| |||||||||| |||||| ||||||| |||| |||||||||||  ||||||||||  |||||||    
T  38448948 gtccttatcataaaaaacaattgactttttatgttcattgtgtaagtgatgtatctgatctatatttatcacaagat 38449024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 14329270 - 14329203
Alignment:
Q  129 attataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaa 196  Q
    ||||||||| |||||||| || ||||||||||| |||| |||||||||||  |||||||||| |||||    
T  14329270 attataagagacaattgacttgttaggttcattgtgtaagtgatgtatctgatctatatttataacaa 14329203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 11724408 - 11724326
Alignment:
Q  124 tccttattataagaaacaatt-gattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||||| || ||| ||| || ||| |||| || || ||||||||||||||||| ||| ||||||||||    
T  11724408 tccttattataagaaacaattagactttatagatttattgtgtaagtaatatatctagtctatatttataacgagatacatta 11724326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 23464522 - 23464588
Alignment:
Q  139 acaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||| | ||||| |||||||| | || | |||||||||||||||||||||||| |||||||||||    
T  23464522 acaattaacttttttggttcattgtataagagatgtatctagtctatatttacaataagatacatta 23464588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 36103543 - 36103494
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| ||||||||||||||||| | ||||||||||||||||||    
T  36103543 atactccctccggtccttattataagaaaaagttgattttttaggttcat 36103494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 25795389 - 25795338
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    |||||||| ||| |||||||||| ||||||||||||| ||||||| ||||||    
T  25795389 tatactccctccggtccttattacaagaaacaattgactttttagattcatt 25795338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 41464711 - 41464762
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    |||||| ||||| ||| ||||||||| ||||||||||||||||| |||||||    
T  41464711 tatacttcatccggtctttattataaaaaacaattgattttttaagttcatt 41464762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 21424896 - 21424954
Alignment:
Q  108 attatactccatcctgtccttattataagaaacaattgattttttaggttcattatgta 166  Q
    |||||||| ||||  |||||||||||||||||||||| | ||||||| |||||| ||||    
T  21424896 attatacttcatctagtccttattataagaaacaatttactttttagtttcattgtgta 21424954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 4755474 - 4755511
Alignment:
Q  125 ccttattataagaaacaattgattttttaggttcatta 162  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  4755474 ccttattataagaaacaattaattttttagattcatta 4755511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 15239842 - 15239793
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  15239842 atactccctccggtccttattataagaaaaagttgactttttaggttcat 15239793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 28143895 - 28143846
Alignment:
Q  111 atactccatcctgtccttattataagaaacaattgattttttaggttcat 160  Q
    ||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  28143895 atactccctccggtccttattataagaaaaagttgactttttaggttcat 28143846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 38449073 - 38449037
Alignment:
Q  126 cttattataagaaacaattgattttttaggttcatta 162  Q
    |||||| |||||||||||||| |||||||||||||||    
T  38449073 cttattttaagaaacaattgactttttaggttcatta 38449037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 3944 - 3865
Alignment:
Q  126 cttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| ||| |||| |||||    
T  3944 cttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatatttataacgagatgcatta 3865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 3805 - 3857
Alignment:
Q  109 ttatactccatcctgtccttattataagaaacaattgattttttaggttcatt 161  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||| | ||||||    
T  3805 ttatactccctccggtccttattataagaaacaattgacttttttgattcatt 3857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 12889 - 12804
Alignment:
Q  118 atcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacat 203  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||| || ||||||||||||||||| ||||| ||| ||||||||    
T  12889 atccggtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttataacgagatacat 12804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 12743 - 12811
Alignment:
Q  110 tatactccatcctgtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatct 178  Q
    |||||||| ||  ||||||||||||||||| | |||| |||||||||||||| | || |||||||||||    
T  12743 tatactccttctggtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatct 12811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 3251 - 3317
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatattta 190  Q
    ||||||||||||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||||    
T  3251 tccttattataagaaacaattgactttttatgttcattgtgtaagtgatgtatctagtctatattta 3317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 112833 - 112925
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacattagttactcaat 215  Q
    ||||||||||||||||||||||||  ||||||||||||| |  |  ||||||||||| |||||||||| |||||||||||||| ||| |||||    
T  112833 gtccttattataagaaacaattgacgttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaattattcaat 112925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 25624 - 25706
Alignment:
Q  123 gtccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    ||||||||||||| |||||||| | ||||| |||| ||||| || ||||||||||||||||||||||| || |||||||||||    
T  25624 gtccttattataaaaaacaattaacttttttggtttattatataagtgatgtatctagtctatatttataataagatacatta 25706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 12350 - 12273
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaagatac 201  Q
    |||||||||||| ||| |||||| |||||||||| ||| |||  ||||||||||||| |||||||||||| |||||||    
T  12350 tccttattataaaaaataattgactttttaggtttattgtgttagtgatgtatctagcctatatttacaagaagatac 12273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 7783 - 7714
Alignment:
Q  124 tccttattataagaaacaattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaa 193  Q
    |||||||||||| ||| |||||| |||||||||| ||| |||  ||||| ||||||| ||||||||||||    
T  7783 tccttattataaaaaataattgactttttaggtttattgtgttagtgatatatctagcctatatttacaa 7714  T

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Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 17478 - 17430
Alignment:
Q  168 gtgatgtatctagtctatatttacaacaagatacattagttactcaatg 216  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  17478 gtgatgtgtctagtctatatttactacaagatacattaattactcaatg 17430  T

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Target: scaffold0176 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 19444 - 19350
Alignment:
Q  112 tactccatcctgtccttattataagaaacaattgattttttaggttc-attatgtaggtgatgtatctagtctatatttacaacaagatacatta 205  Q
    |||||||||  ||||| ||||| | |||||||||| ||||| ||||  ||| |||| ||||||||  |||||||||||||||| |||||| ||||    
T  19444 tactccatcgagtcctgattattataaacaattgacttttttggttttattttgtaagtgatgtaagtagtctatatttacaataagatatatta 19350  T

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Target: scaffold0474 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 11934 - 11858
Alignment:
Q  123 gtccttattataagaaa-caattgattttttaggttcattatgtaggtgatgtatctagtctatatttacaacaaga 198  Q
    |||||| |||||||||| ||  ||| |||||||||| |||||| |  ||||||||||||| |||||||| |||||||    
T  11934 gtccttgttataagaaaacaggtgactttttaggtttattatgcaactgatgtatctagtttatatttataacaaga 11858  T

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