View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10701_low_13 (Length: 284)

Name: NF10701_low_13
Description: NF10701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10701_low_13
NF10701_low_13
[»] chr6 (3 HSPs)
chr6 (1-267)||(21979474-21979740)
chr6 (88-149)||(21015900-21015961)
chr6 (205-253)||(14197704-14197752)
[»] chr4 (30 HSPs)
chr4 (202-248)||(7237760-7237806)
chr4 (202-256)||(7813467-7813521)
chr4 (202-256)||(7822956-7823010)
chr4 (204-248)||(7771396-7771440)
chr4 (204-248)||(7790081-7790125)
chr4 (89-161)||(49048503-49048575)
chr4 (205-246)||(7908325-7908366)
chr4 (209-254)||(50669047-50669092)
chr4 (209-253)||(37827029-37827073)
chr4 (89-161)||(45371999-45372071)
chr4 (12-64)||(50250625-50250677)
chr4 (205-248)||(7877727-7877770)
chr4 (88-254)||(48852658-48852818)
chr4 (94-157)||(48891495-48891558)
chr4 (95-161)||(7237677-7237743)
chr4 (202-248)||(7773854-7773900)
chr4 (202-256)||(7800624-7800678)
chr4 (205-254)||(50250821-50250870)
chr4 (113-161)||(7771459-7771507)
chr4 (113-161)||(7790144-7790192)
chr4 (88-159)||(48903013-48903084)
chr4 (92-157)||(43596368-43596433)
chr4 (205-254)||(48170602-48170651)
chr4 (113-161)||(7800695-7800743)
chr4 (113-161)||(7813538-7813586)
chr4 (205-249)||(45384908-45384952)
chr4 (205-249)||(48147757-48147801)
chr4 (92-160)||(49044120-49044188)
chr4 (202-254)||(49048610-49048662)
chr4 (113-161)||(50250735-50250783)
[»] chr8 (3 HSPs)
chr8 (205-254)||(12200299-12200348)
chr8 (205-254)||(12444727-12444776)
chr8 (205-251)||(4031941-4031987)
[»] chr7 (2 HSPs)
chr7 (205-254)||(48883793-48883842)
chr7 (98-166)||(48883878-48883946)
[»] chr3 (2 HSPs)
chr3 (206-253)||(11005994-11006041)
chr3 (206-253)||(11024569-11024616)
[»] chr5 (1 HSPs)
chr5 (109-159)||(179112-179162)
[»] chr1 (2 HSPs)
chr1 (209-249)||(24310168-24310208)
chr1 (205-249)||(24367144-24367188)


Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 21979474 - 21979740
Alignment:
Q  1 aacaaacacacataaatcataccgaaaagtcaaccaatgaatagccctattaaagaaaaccccttgtttggaatgatcattattgggattcatataaggg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21979474 aacaaacacagataaatcataccgaaaagtcaaccaatgaatagccctattaaagaaaaccccttgtttggaatgatcattattgggattcatataaggg 21979573  T
Q  101 aaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtggtaaaacgacattattggatatgattgggtcatagccca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21979574 aaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtggtaaaacgacattattggatatgattgggtcatagccca 21979673  T
Q  201 ttacaaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagattagtatttacacg 267  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21979674 ttagaaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagattagtatttacacg 21979740  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 21015961 - 21015900
Alignment:
Q  88 attcatataagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaa 149  Q
    |||||| ||||||||  ||| ||||||||||| ||||||  ||||||||||||| |||||||    
T  21015961 attcatgtaagggaagggagtaccctcaatttctttccacctattatctctcaacgagaaaa 21015900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 14197704 - 14197752
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccatataga 253  Q
    ||||||||||||||||||  ||||| ||||||| ||||| |||||||||    
T  14197704 aaccaccaagtaatcattggttgacaggtcatacccaaagccatataga 14197752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 7237760 - 7237806
Alignment:
Q  202 tacaaccaccaagtaatcatttcttgactggtcataaccaaaaccat 248  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  7237760 tacaaccaccaagtaatcatctcttgactggtcataaccaaaaccat 7237806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 7813521 - 7813467
Alignment:
Q  202 tacaaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagatta 256  Q
    |||||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  7813521 tacaaccagcacgtaatcatctcttgactggtcataaccaaaaccatatagatta 7813467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 7823010 - 7822956
Alignment:
Q  202 tacaaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagatta 256  Q
    |||||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  7823010 tacaaccagcacgtaatcatctcttgactggtcataaccaaaaccatatagatta 7822956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 7771440 - 7771396
Alignment:
Q  204 caaccaccaagtaatcatttcttgactggtcataaccaaaaccat 248  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  7771440 caaccaccaagtaatcatctcttgactggtcataaccaaaaccat 7771396  T

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Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 7790125 - 7790081
Alignment:
Q  204 caaccaccaagtaatcatttcttgactggtcataaccaaaaccat 248  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  7790125 caaccaccaagtaatcatctcttgactggtcataaccaaaaccat 7790081  T

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Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 49048503 - 49048575
Alignment:
Q  89 ttcatataagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtg 161  Q
    |||||||||||||  |||| ||||||||||| ||||||  ||||||||||||| ||||||| |||||||||||    
T  49048503 ttcatataagggatgtgagtaccctcaatttctttccatatattatctctcaacgagaaaaactccaaatgtg 49048575  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 7908366 - 7908325
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaacc 246  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  7908366 aaccaccaagtaatcatctcttgactggtcataaccaaaacc 7908325  T

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Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 50669092 - 50669047
Alignment:
Q  209 accaagtaatcatttcttgactggtcataaccaaaaccatatagat 254  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  50669092 accaagtaatcatctcttgaccggtcataaccaaaaccatatagat 50669047  T

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Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 37827029 - 37827073
Alignment:
Q  209 accaagtaatcatttcttgactggtcataaccaaaaccatataga 253  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  37827029 accaagtaatcatctctagactggtcataaccaaaaccatataga 37827073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 45371999 - 45372071
Alignment:
Q  89 ttcatataagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtg 161  Q
    |||| ||||||||| |||| |||||||| || | |||| |||||||||||||| ||||||| |||||||||||    
T  45371999 ttcaaataagggaagtgagtaccctcaagttctctccaagtattatctctcaatgagaaaaactccaaatgtg 45372071  T

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Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 50250625 - 50250677
Alignment:
Q  12 ataaatcataccgaaaagtcaaccaatgaatagccctattaaagaaaacccct 64  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||| |||||||    
T  50250625 ataaatcataacgaaaagccaaccaatgaatagccccattaaagagaacccct 50250677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 248
Target Start/End: Complemental strand, 7877770 - 7877727
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccat 248  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  7877770 aaccaccaagtaatcatctcttgattggtcataaccaaaaccat 7877727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 254
Target Start/End: Complemental strand, 48852818 - 48852658
Alignment:
Q  88 attcatataagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtggtaaaacgacattattggatatgatt 187  Q
    |||||| |||||||| |||| ||||||||||| |||||| | |||| ||||||| ||||||| ||| ||||||| | ||||      ||| | || | ||    
T  48852818 attcatgtaagggaagtgagtaccctcaatttctttccatgcattagctctcaatgagaaaaactctaaatgtgatgaaac------attagctaaggtt 48852725  T
Q  188 gggtcatagcccattacaaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagat 254  Q
    |  ||||||  ||||| ||| |||||||||||||   ||||| ||||||| ||||||||||||||||    
T  48852724 gtatcataggacattaaaactaccaagtaatcatcggttgacgggtcatacccaaaaccatatagat 48852658  T

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Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 48891558 - 48891495
Alignment:
Q  94 ataagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaa 157  Q
    ||||||||||| || ||||||||||| ||||||  ||||||||||||| ||||||| |||||||    
T  48891558 ataagggaaataagtaccctcaatttctttccacatattatctctcaatgagaaaaactccaaa 48891495  T

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Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 7237677 - 7237743
Alignment:
Q  95 taagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtg 161  Q
    ||||||||||||  ||  ||||||| ||||||  |||||||||| ||||||||||||||||||||||    
T  7237677 taagggaaatgaatacaatcaatttctttccacatattatctctaaaagagaaaacctccaaatgtg 7237743  T

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Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 7773854 - 7773900
Alignment:
Q  202 tacaaccaccaagtaatcatttcttgactggtcataaccaaaaccat 248  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||    
T  7773854 tacaaccaccaagtaatcatctcttacctggtcataaccaaaaccat 7773900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 7800678 - 7800624
Alignment:
Q  202 tacaaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagatta 256  Q
    |||||||| || ||| |||| ||||||||||||||||||||||||||||| ||||    
T  7800678 tacaaccagcacgtactcatctcttgactggtcataaccaaaaccatataaatta 7800624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 50250821 - 50250870
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagat 254  Q
    ||||||||| ||||||| | |||| |||||||||||||||||||||||||    
T  50250821 aaccaccaaataatcatctgttgagtggtcataaccaaaaccatatagat 50250870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 7771507 - 7771459
Alignment:
Q  113 tcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtg 161  Q
    ||||||| |||||| ||||||||||| || |||||||||||||||||||    
T  7771507 tcaatttctttccacgtattatctctaaatgagaaaacctccaaatgtg 7771459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 7790192 - 7790144
Alignment:
Q  113 tcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtg 161  Q
    ||||||| |||||| ||||||||||| || |||||||||||||||||||    
T  7790192 tcaatttctttccacgtattatctctaaatgagaaaacctccaaatgtg 7790144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 48903084 - 48903013
Alignment:
Q  88 attcatataagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatg 159  Q
    |||| |||||||||| ||||  ||||| || |||||||| |||||||||||||| ||||||| ||| |||||    
T  48903084 attcgtataagggaagtgagttccctccatctgtttccatgtattatctctcaatgagaaaatctctaaatg 48903013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 43596368 - 43596433
Alignment:
Q  92 atataagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaa 157  Q
    ||||||||||||| || ||||| || || ||||| | ||||||||||||| ||||||| |||||||    
T  43596368 atataagggaaattagtacccttaagttctttccggttattatctctcaatgagaaaagctccaaa 43596433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 48170602 - 48170651
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagat 254  Q
    |||||| |||||||||| |||| |||| ||||| ||||||||||||||||    
T  48170602 aaccactaagtaatcatctcttaactgatcatacccaaaaccatatagat 48170651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 7800743 - 7800695
Alignment:
Q  113 tcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtg 161  Q
    ||||||| ||||||||||||||||   || |||||||||||||||||||    
T  7800743 tcaatttctttccaggtattatctggaaacgagaaaacctccaaatgtg 7800695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 7813586 - 7813538
Alignment:
Q  113 tcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtg 161  Q
    ||||||| ||||||||||||||||   || |||||||||||||||||||    
T  7813586 tcaatttctttccaggtattatctggaaaggagaaaacctccaaatgtg 7813538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 45384908 - 45384952
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccata 249  Q
    ||||||||| ||||||||| ||||||| ||||| |||||||||||    
T  45384908 aaccaccaaataatcatttgttgactgatcatacccaaaaccata 45384952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 48147757 - 48147801
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccata 249  Q
    ||||||||||||||||| | || |||||||||| |||||||||||    
T  48147757 aaccaccaagtaatcatctgttaactggtcatacccaaaaccata 48147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 49044120 - 49044188
Alignment:
Q  92 atataagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgt 160  Q
    ||||||||||| | || | |||||||||  |||||  ||||||||||||| ||||||| ||||||||||    
T  49044120 atataagggaagttagtaacctcaatttcattccatctattatctctcaatgagaaaaactccaaatgt 49044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 49048610 - 49048662
Alignment:
Q  202 tacaaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagat 254  Q
    |||||||||||| ||||||| | ||||  ||||||| ||||||||||||||||    
T  49048610 tacaaccaccaaataatcatctgttgatgggtcatacccaaaaccatatagat 49048662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 50250735 - 50250783
Alignment:
Q  113 tcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtg 161  Q
    ||||||||||||||| |||||| |||||| || |||| |||||||||||    
T  50250735 tcaatttgtttccagatattatttctcaatgaaaaaaactccaaatgtg 50250783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 12200348 - 12200299
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagat 254  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  12200348 aaccaccaagtaatcatctcttgaccggtcataaccaaaaccatatagat 12200299  T

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Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 12444776 - 12444727
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagat 254  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  12444776 aaccaccaagtaatcatctcttgaccggtcataaccaaaaccatatagat 12444727  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 4031941 - 4031987
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccatata 251  Q
    |||||||| ||| |||||| ||||||||||||| |||||||||||||    
T  4031941 aaccaccaggtagtcatttgttgactggtcatacccaaaaccatata 4031987  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 48883842 - 48883793
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccatatagat 254  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  48883842 aaccaccatgtaatcatctcttgacgggtcataaccaaaaccatatagat 48883793  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 48883946 - 48883878
Alignment:
Q  98 gggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatgtggtaaa 166  Q
    ||||| |||||| ||||||||| ||||||  ||||||||||||| ||||||  ||||||||||| ||||    
T  48883946 gggaagtgagcatcctcaatttctttccacatattatctctcaatgagaaacactccaaatgtgataaa 48883878  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 11005994 - 11006041
Alignment:
Q  206 accaccaagtaatcatttcttgactggtcataaccaaaaccatataga 253  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  11005994 accaccaagtaatcatctcttgaatggtcatacccaaaaccatataga 11006041  T

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Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 11024569 - 11024616
Alignment:
Q  206 accaccaagtaatcatttcttgactggtcataaccaaaaccatataga 253  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  11024569 accaccaagtaatcatctcttgaatggtcatacccaaaaccatataga 11024616  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 179162 - 179112
Alignment:
Q  109 accctcaatttgtttccaggtattatctctcaaagagaaaacctccaaatg 159  Q
    ||||||||||| |||||| |||||||||||||| ||||||| |||||||||    
T  179162 accctcaatttctttccatgtattatctctcaatgagaaaatctccaaatg 179112  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 24310208 - 24310168
Alignment:
Q  209 accaagtaatcatttcttgactggtcataaccaaaaccata 249  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  24310208 accaagtaatcatctcttgactcgtcataaccaaaaccata 24310168  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 24367188 - 24367144
Alignment:
Q  205 aaccaccaagtaatcatttcttgactggtcataaccaaaaccata 249  Q
    ||||||||||||||||| | |||||| |||||| |||||||||||    
T  24367188 aaccaccaagtaatcatctgttgacttgtcatacccaaaaccata 24367144  T

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