View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10701_low_7 (Length: 373)
Name: NF10701_low_7
Description: NF10701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10701_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 45 - 364
Target Start/End: Complemental strand, 9720480 - 9720161
Alignment:
| Q |
45 |
ctaaaatgtagggtaaatagaaataagaaaatggacagttttatattgtgtaaagatatggtcccctaatgttggcactacttttgattttgcagacaaa |
144 |
Q |
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| T |
9720480 |
ctaaaatgtggggtaaataaaaataagaaaatggacagatttatattgtgtaaagatatggtcccctaatgttggcactacttttgattctgcagacaaa |
9720381 |
T |
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| Q |
145 |
gatgtgtgaaggatggaagcgtgtggttccatggaagagtgaaaaagtgaagaagtatcaatgttggtggttttaggagctatagtattttacactgtca |
244 |
Q |
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| T |
9720380 |
gatgtgtgaaggatggaagcgtgtggttccatggaagagtgaaaaagtgaacaagtatcagtgttggtggttttaggagctatagtattttagactgtca |
9720281 |
T |
|
| Q |
245 |
ggtcaaaatcaattatgtgcatgatgaccactacatatgtaccatgttttgcctaatttgtcttttacatatcttcaccaaatcaaatgtcacaggtctc |
344 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
9720280 |
ggtcaaaatcaattatgtgcatgatgaccactacatatgtaccatgttttgcctaatttgtcctttacatatcttcaccaaatcaaatgtcacaggtctc |
9720181 |
T |
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| Q |
345 |
attcaaggtctatttcttct |
364 |
Q |
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|||||||||||||||||||| |
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| T |
9720180 |
attcaaggtctatttcttct |
9720161 |
T |
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