View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10702_high_12 (Length: 286)
Name: NF10702_high_12
Description: NF10702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10702_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 35470678 - 35470426
Alignment:
| Q |
18 |
tttattaattagcaatagtagttgtacatcattttcaacattaattatcgaatgatctataannnnnnnngtcattaagaaaaaccatcagaaactcgat |
117 |
Q |
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| T |
35470678 |
tttattaattagcaatagtagttgtacatcattttcaacattaattatcgaatgatctataattttttttgtcattaagaaaaaccatcagaaactcgat |
35470579 |
T |
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| Q |
118 |
ctataagtattaatgcaactttatctttaaatttaagcaaaaatagccttagaatattacgtgcagaaataaatttttacatttaactttgtatcgatac |
217 |
Q |
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||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
35470578 |
ctataagcattaatgcaactttgtctttaaatttaagcaaaaatagacttagaatattacgtgcagaaataaatttttacatttaactttgtatagatac |
35470479 |
T |
|
| Q |
218 |
atttgtagttaattattaacagtccaattgaagtaatattaaaatttaggttc |
270 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35470478 |
atttgtagttaattattaacagtccaattgaagtaatattaaaatttaggttc |
35470426 |
T |
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