View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10702_high_26 (Length: 240)
Name: NF10702_high_26
Description: NF10702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10702_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 9336538 - 9336325
Alignment:
| Q |
11 |
atatatacagccacaagaacattaatcagaagagtgaagaccaaaaccagctggacaacaatgttgatgaacgagttacttgtactcactctcattttcg |
110 |
Q |
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| T |
9336538 |
atatatacagccacaagaacattaatcagaagagtgaagaccaaaaccagctggacaacaatgttgatgaacgagttacttgtactcactctcattttcg |
9336439 |
T |
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| Q |
111 |
atatgatctattattaatctttgcagttcaaggnnnnnnngaatgttcctgaataaatgatcgcatatatcctaaccaaatatccctcaataatgaatac |
210 |
Q |
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| T |
9336438 |
atatgatctattattaatctttgcagttcaaggaaaaaaagaatgttcctgaataaatgatcgcatatatcctaaccaaatatccctcaacaatgaatac |
9336339 |
T |
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| Q |
211 |
atgacacgtatact |
224 |
Q |
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||||||| |||||| |
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| T |
9336338 |
atgacacatatact |
9336325 |
T |
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