View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10702_low_10 (Length: 382)

Name: NF10702_low_10
Description: NF10702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10702_low_10
NF10702_low_10
[»] chr6 (7 HSPs)
chr6 (18-378)||(6261672-6262032)
chr6 (153-242)||(67162-67253)
chr6 (93-147)||(5161258-5161312)
chr6 (168-225)||(14430023-14430080)
chr6 (153-200)||(5161172-5161219)
chr6 (95-146)||(29064732-29064783)
chr6 (95-146)||(29119586-29119637)
[»] chr3 (16 HSPs)
chr3 (153-321)||(49906902-49907070)
chr3 (153-244)||(30076237-30076328)
chr3 (153-321)||(30803599-30803768)
chr3 (202-321)||(43429824-43429943)
chr3 (153-227)||(25203048-25203122)
chr3 (153-229)||(25735220-25735296)
chr3 (93-148)||(43426751-43426806)
chr3 (94-144)||(30076363-30076413)
chr3 (153-225)||(4137255-4137327)
chr3 (94-142)||(41283441-41283489)
chr3 (93-148)||(49907108-49907164)
chr3 (93-148)||(25203158-25203213)
chr3 (96-147)||(25374970-25375021)
chr3 (153-195)||(12005465-12005507)
chr3 (158-200)||(43426849-43426891)
chr3 (177-225)||(36475540-36475588)
[»] chr5 (14 HSPs)
chr5 (153-359)||(11079743-11079949)
chr5 (153-242)||(18475930-18476021)
chr5 (153-241)||(30335458-30335548)
chr5 (153-241)||(30485453-30485543)
chr5 (96-148)||(22229504-22229556)
chr5 (93-153)||(30335581-30335641)
chr5 (153-222)||(22229397-22229466)
chr5 (93-147)||(30485360-30485414)
chr5 (153-229)||(29456529-29456605)
chr5 (94-153)||(29456638-29456698)
chr5 (156-224)||(41047446-41047514)
chr5 (153-208)||(32868377-32868432)
chr5 (153-195)||(17109060-17109102)
chr5 (94-148)||(32868289-32868343)
[»] chr4 (19 HSPs)
chr4 (153-321)||(13216546-13216714)
chr4 (156-321)||(35765270-35765435)
chr4 (153-322)||(45538211-45538379)
chr4 (153-322)||(53840355-53840524)
chr4 (155-320)||(54046438-54046605)
chr4 (153-359)||(24571892-24572094)
chr4 (50-148)||(35765132-35765229)
chr4 (153-242)||(26509932-26510020)
chr4 (93-148)||(13216453-13216508)
chr4 (153-249)||(14272418-14272516)
chr4 (153-228)||(20526583-20526658)
chr4 (93-148)||(45538117-45538172)
chr4 (94-148)||(20526696-20526750)
chr4 (99-153)||(24571805-24571859)
chr4 (94-148)||(54046341-54046395)
chr4 (93-144)||(32742584-32742635)
chr4 (93-152)||(53840558-53840617)
chr4 (153-225)||(2158679-2158751)
chr4 (354-382)||(39907375-39907403)
[»] chr1 (12 HSPs)
chr1 (170-359)||(13694174-13694361)
chr1 (153-321)||(10160050-10160219)
chr1 (93-154)||(10160251-10160312)
chr1 (153-224)||(31860733-31860804)
chr1 (93-148)||(8730278-8730333)
chr1 (190-321)||(15697532-15697664)
chr1 (96-148)||(9367753-9367805)
chr1 (153-225)||(45867635-45867707)
chr1 (177-228)||(9370713-9370764)
chr1 (93-148)||(36429995-36430050)
chr1 (93-148)||(43964413-43964468)
chr1 (153-225)||(14230092-14230164)
[»] chr7 (4 HSPs)
chr7 (157-321)||(3855431-3855594)
chr7 (153-320)||(5467451-5467620)
chr7 (95-140)||(3855308-3855353)
chr7 (97-152)||(5467362-5467417)
[»] chr8 (10 HSPs)
chr8 (153-321)||(72618-72787)
chr8 (153-259)||(37044338-37044446)
chr8 (92-148)||(72526-72582)
chr8 (94-148)||(31235944-31235998)
chr8 (93-148)||(37044484-37044539)
chr8 (153-319)||(16863294-16863461)
chr8 (96-152)||(16859658-16859714)
chr8 (93-140)||(27633174-27633221)
chr8 (153-225)||(31235834-31235906)
chr8 (153-225)||(32161378-32161450)
[»] chr2 (7 HSPs)
chr2 (153-229)||(10498670-10498746)
chr2 (153-359)||(16643864-16644077)
chr2 (153-229)||(43798202-43798278)
chr2 (180-317)||(37598713-37598854)
chr2 (96-148)||(10498784-10498836)
chr2 (153-225)||(34190075-34190147)
chr2 (100-148)||(37599790-37599838)
[»] scaffold0042 (1 HSPs)
scaffold0042 (96-148)||(93882-93934)
[»] scaffold0004 (1 HSPs)
scaffold0004 (94-148)||(242416-242469)
[»] scaffold0684 (1 HSPs)
scaffold0684 (155-225)||(4156-4226)
[»] scaffold0163 (1 HSPs)
scaffold0163 (155-225)||(3892-3962)


Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 18 - 378
Target Start/End: Complemental strand, 6262032 - 6261672
Alignment:
Q  18 attagtatctcgaagaatactgtcacaccaaagggcggatttggactttcaataccagtggggcacannnnnnnggtcaaataattaaataatattaatt 117  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||       |||||||||||||||||||||||| |    
T  6262032 attagtatctcgaagaatactatcacacccaagggcggatctggactttcaataccaatggggcacatttttttggtcaaataattaaataatattaaat 6261933  T
Q  118 ctaataagaagttatattaaaaatagttgtaacaattgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatatagg 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  6261932 ctaataagaagttatattaaaaatagttgtaacaattgttgaaaatgaaataaaatcgtatcattactaattgttttaagaacttctctttctatatagg 6261833  T
Q  218 ttacaagagatgtcaaatgctctagtaggatatctgtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaat 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  6261832 ttacaagagatgtcaaatgctctagtaggatatctgtgcatacgaatgagtgaccatgttgcactctttttatggaagcaagtcccaattgcatagaaat 6261733  T
Q  318 tatatnnnnnnnngtctctgtattgatatatgaataaaaataggcttaattgcacttttgg 378  Q
    |||||        ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6261732 tatataaaaaaaagtctctgtattgatatatgaataaaaataggcttaattgcacttttgg 6261672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 67253 - 67162
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctag 242  Q
    |||||||||| ||| ||||||| ||| ||||||||||||||||||||| ||| | | ||||||||||||||||||||  |||||||||||||    
T  67253 ttgttgaaaacgaactaaaattatattattactaattgttctaagaacatctatgtctatataggttacaagagatgaatcaaatgctctag 67162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 5161312 - 5161258
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgt 147  Q
    ||||||||||||||||||| ||  | ||||||||||||||||||||||| |||||    
T  5161312 gtcaaataattaaataatactatatttaataagaagttatattaaaaatggttgt 5161258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 14430080 - 14430023
Alignment:
Q  168 taaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    |||||||  |||||||||||||||| ||||||| ||||||| |||||| |||||||||    
T  14430080 taaaattacatcattactaattgttttaagaacatctctttctatatacgttacaaga 14430023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 5161219 - 5161172
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaac 200  Q
    ||||||||||| || ||||||| |||||||| ||||||||||||||||    
T  5161219 ttgttgaaaataaactaaaattatatcattattaattgttctaagaac 5161172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 29064732 - 29064783
Alignment:
Q  95 caaataattaaataatattaattctaataagaagttatattaaaaatagttg 146  Q
    ||||||| ||||||||| | | | ||||||||||||||||||||||||||||    
T  29064732 caaataactaaataatactcaatttaataagaagttatattaaaaatagttg 29064783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 29119586 - 29119637
Alignment:
Q  95 caaataattaaataatattaattctaataagaagttatattaaaaatagttg 146  Q
    ||||||| ||||||||| | | | ||||||||||||||||||||||||||||    
T  29119586 caaataactaaataatactcaatttaataagaagttatattaaaaatagttg 29119637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 153 - 321
Target Start/End: Complemental strand, 49907070 - 49906902
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagtaggatatct 252  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||||||  |    
T  49907070 ttgtagaaaatgaaataaaattatatcattactaattgttctaagaacatctctttctatataggttacgagagatgtcaaatgctctagcaggatactt 49906971  T
Q  253 gtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattata 321  Q
    ||||||||| |||||||| | |||| | |||||||| ||||||||||||||||||||||||||||||||    
T  49906970 gtgcatacggacgagtgagcgtgttgcgctctttttttggaagcaagtcgcaattgcatagaaattata 49906902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 30076328 - 30076237
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagta 244  Q
    |||||||||||||| ||||||| |||||||||||| | |||||||||  ||||||| | ||||||||||||||||||||||| |||||||||    
T  30076328 ttgttgaaaatgaactaaaattatatcattactaactattctaagaaaatctctttatgtataggttacaagagatgtcaaaggctctagta 30076237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 153 - 321
Target Start/End: Complemental strand, 30803768 - 30803599
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctagtaggatat 250  Q
    ||||||||||| || | ||||| ||||||||||||||||||||| | | ||||||| ||||||||||||||||||||  ||||||||||||  ||||||     
T  30803768 ttgttgaaaataaactcaaattatatcattactaattgttctaa-agcatctctttctatataggttacaagagatgaatcaaatgctctaccaggatac 30803670  T
Q  251 ctgtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattata 321  Q
    | |  |||| | |||| ||| | ||||   |||||||| || |||||||||||||||| ||||||| ||||    
T  30803669 ccgcccatatggacgaatgagcgtgttgagctctttttttgaaagcaagtcgcaattgtatagaaactata 30803599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 43429824 - 43429943
Alignment:
Q  202 tctctttttatataggttacaagagatgtcaaatgctctagtaggatatctgtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtc 301  Q
    ||||||| |||||| |||||||||||||| ||||||||||| | |||| | ||||||||| ||| ||||    ||| |||||||||| |||||||| |||    
T  43429824 tctctttatatataagttacaagagatgtaaaatgctctagcatgatacccgtgcatacggacgggtgagtgcgttgcactctttttttggaagcatgtc 43429923  T
Q  302 gcaattgcatagaaattata 321  Q
    ||| ||||||||||||||||    
T  43429924 gcagttgcatagaaattata 43429943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 25203122 - 25203048
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagaga 227  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||| |||||| |||||||||||    
T  25203122 ttgttgaaaatgaactaaaattatatcattactaattattctaagaacatctctttctatataagttacaagaga 25203048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 25735220 - 25735296
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg 229  Q
    |||||||||||||| ||||||| |||||||||||||| ||| |||||| ||||||| |||||| |||||||||||||    
T  25735220 ttgttgaaaatgaattaaaattatatcattactaattattcaaagaacatctctttctatataagttacaagagatg 25735296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 43426751 - 43426806
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  43426751 gtcaaataattaaataatattaaatttaataagaagttatattaaaaatagttgta 43426806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 30076413 - 30076363
Alignment:
Q  94 tcaaataattaaataatattaattctaataagaagttatattaaaaatagt 144  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  30076413 tcaaataattaaataatattaaatttaataagaagttatattaaaaatagt 30076363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 4137327 - 4137255
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    |||||||||||||  ||||||   ||| |||||||||||||||||||| ||||||  |||||| |||||||||    
T  4137327 ttgttgaaaatgagttaaaatgacatcgttactaattgttctaagaacatctcttactatatatgttacaaga 4137255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 41283489 - 41283441
Alignment:
Q  94 tcaaataattaaataatattaattctaataagaagttatattaaaaata 142  Q
    |||||||||||||||||| ||| | ||||||||||||||| ||||||||    
T  41283489 tcaaataattaaataatactaaatgtaataagaagttatactaaaaata 41283441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 49907164 - 49907108
Alignment:
Q  93 gtcaaataattaaataatattaattctaat-aagaagttatattaaaaatagttgta 148  Q
    ||||||||||||||||||||||| | |||| || ||||||||| |||||||||||||    
T  49907164 gtcaaataattaaataatattaaatttaataaaaaagttatataaaaaatagttgta 49907108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 25203213 - 25203158
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||||||| | |||||| ||| | |||||||||||||||||| |||||||||||    
T  25203213 gtcaaataatcagataatactaaatttaataagaagttatattagaaatagttgta 25203158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 25374970 - 25375021
Alignment:
Q  96 aaataattaaataatattaattctaataagaagttatattaaaaatagttgt 147  Q
    |||||||||| ||||| ||| |  ||||||||||||||||||||||||||||    
T  25374970 aaataattaagtaatactaaattcaataagaagttatattaaaaatagttgt 25375021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 12005507 - 12005465
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttcta 195  Q
    |||||||||||||  |||||||| |||||||||||||||||||    
T  12005507 ttgttgaaaatgagctaaaattgcatcattactaattgttcta 12005465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 43426849 - 43426891
Alignment:
Q  158 gaaaatgaaataaaattgtatcattactaattgttctaagaac 200  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||    
T  43426849 gaaaatgaactaaaattatatcattgctaattgttctaagaac 43426891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 36475540 - 36475588
Alignment:
Q  177 atcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    |||||| |||||||||  |||||| |||||||||||||| |||||||||    
T  36475540 atcattgctaattgttaaaagaacatctctttttatataagttacaaga 36475588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 153 - 359
Target Start/End: Complemental strand, 11079949 - 11079743
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagtaggatatct 252  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  || ||    
T  11079949 ttgttgaaaatgaaataaaatcatatcattattaattgttctaagaacatctctttttatataggttacaagagatgtcaaatgctctagcagagtaact 11079850  T
Q  253 gtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattatatnnnnnnnngtctctgtattgatatatgaat 352  Q
    ||||||| |||||||||| |  ||| | || ||||| ||||||||||||||||||||||||||||||||         |||| ||||||||||| |||||    
T  11079849 gtgcatatgaacgagtgagcgcgttgcgctatttttttggaagcaagtcgcaattgcatagaaattataaaaaaaaaagtctttgtattgatatttgaat 11079750  T
Q  353 aaaaata 359  Q
    |||||||    
T  11079749 aaaaata 11079743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 18476021 - 18475930
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctag 242  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||    
T  18476021 ttgttgaaaatgaactaaaattatataattactaattgttctaagaacatctctttctatataggttacaagagatgaatcaaatgctctag 18475930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 30335548 - 30335458
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctcta 241  Q
    |||||||| || || ||||||| ||| ||||||||||||||||||||  || |||| ||||||||||||||||||||  ||||||||||||    
T  30335548 ttgttgaatataaactaaaattatataattactaattgttctaagaatatccctttctatataggttacaagagatgaatcaaatgctcta 30335458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 30485453 - 30485543
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctcta 241  Q
    |||||||| || || ||||||| ||| ||||||||||||||||||||| || |||| ||||||| ||||||||||||  ||||||||||||    
T  30485453 ttgttgaatataaactaaaattatataattactaattgttctaagaacatccctttctatatagattacaagagatgaatcaaatgctcta 30485543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 22229556 - 22229504
Alignment:
Q  96 aaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||    
T  22229556 aaataattaaataatattaaatttaataagaagttatattaaaaataattgta 22229504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 30335641 - 30335581
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgtaacaat 153  Q
    |||||| |||||||||||||||| | |||||||||| ||||||||||||||||||| ||||    
T  30335641 gtcaaacaattaaataatattaaatttaataagaagatatattaaaaatagttgtagcaat 30335581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 22229466 - 22229397
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttaca 222  Q
    ||||||||||| || ||||||| ||| ||||||||||||||||||||| ||||||| || ||||| ||||    
T  22229466 ttgttgaaaataaactaaaattatattattactaattgttctaagaacatctctttatacataggctaca 22229397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 30485360 - 30485414
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgt 147  Q
    |||||| |||||||||||||||| | | |||||||| ||||||||||||||||||    
T  30485360 gtcaaacaattaaataatattaaatttgataagaagatatattaaaaatagttgt 30485414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 29456605 - 29456529
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg 229  Q
    ||||| |||||||| ||||| | |||| ||||||||| || ||||||| ||| ||| ||||||||||||| ||||||    
T  29456605 ttgttaaaaatgaactaaaactatatcgttactaattattttaagaacatctatttctatataggttacaggagatg 29456529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 29456698 - 29456638
Alignment:
Q  94 tcaaataattaaataatattaattctaataagaagttatatta-aaaatagttgtaacaat 153  Q
    |||||||||||||||||  ||| | |||||||||||||||||| |||||||||||| ||||    
T  29456698 tcaaataattaaataattctaaatttaataagaagttatattaaaaaatagttgtagcaat 29456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 41047446 - 41047514
Alignment:
Q  156 ttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaag 224  Q
    ||||||||||| |||||||  ||||||| |||||||||||||||| ||| ||| |||||| | ||||||    
T  41047446 ttgaaaatgaattaaaattacatcattagtaattgttctaagaacatctttttctatatatgctacaag 41047514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 32868377 - 32868432
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctcttt 208  Q
    ||||| |||||||| |||||||  ||||||| |||||||||||||||| |||||||    
T  32868377 ttgttaaaaatgaattaaaattacatcattaataattgttctaagaacatctcttt 32868432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 17109060 - 17109102
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttcta 195  Q
    |||||||||||||  |||||||| |||||||||||||||||||    
T  17109060 ttgttgaaaatgagctaaaattgcatcattactaattgttcta 17109102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 32868289 - 32868343
Alignment:
Q  94 tcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||||||||||||| | ||| | ||||||||| |||||||||||||| |||||    
T  32868289 tcaaataattaaataaaactaaatttaataagaaattatattaaaaataattgta 32868343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 6e-50; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 153 - 321
Target Start/End: Original strand, 13216546 - 13216714
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagtaggatatct 252  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||  |    
T  13216546 ttgttgaaaatgaaacaaaatcatatcattactaattgttctaagaacatctctttctatataggtcacaagagatgtcaaatgctctagcaggatactt 13216645  T
Q  253 gtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattata 321  Q
    || |||||| |||||||| | |||| | |||||||| |||||||||||| |||||||||||||||||||    
T  13216646 gtacatacggacgagtgagcgtgttgcgctctttttttggaagcaagtcacaattgcatagaaattata 13216714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 321
Target Start/End: Original strand, 35765270 - 35765435
Alignment:
Q  156 ttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagtaggatatctgtg 255  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||||||||| |||| | |||||    
T  35765270 ttgaaaatgaactaaaatcatatcattactaattgttctaagaacatctctctctgtataggttacaagagatgtcaaatgctctagcaggacacctgtg 35765369  T
Q  256 catacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattata 321  Q
    |||||| ||||||||  | ||| | |||||||| ||||||||||||||||||| ||| ||||||||    
T  35765370 catacggacgagtgagtacgttgcgctctttttttggaagcaagtcgcaattggataaaaattata 35765435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 322
Target Start/End: Original strand, 45538211 - 45538379
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagtaggatatct 252  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||||| |||| || ||||||||||||||||||||| |||||| ||||||||||| |     
T  45538211 ttgttgaaaatgaactaaaattatatcattactgattgttctaagaacatctccttctatataggttacaagagatgt-aaatgccctagtaggataccc 45538309  T
Q  253 gtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattatat 322  Q
    |||||||| |||  || | |   || | |||||||| |||||||||||||||||||||||||||||||||    
T  45538310 gtgcatacaaacaggttagcgcattacgctctttttttggaagcaagtcgcaattgcatagaaattatat 45538379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 153 - 322
Target Start/End: Complemental strand, 53840524 - 53840355
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagtaggatatct 252  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||| |     
T  53840524 ttgttgaaaatgaactaaaattatatcattactaattgttttaagaacatctctttatatataggttacaagagatgtcaaatgctctagcaggataccc 53840425  T
Q  253 gtgcatac-gaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattatat 322  Q
    |||||| | || ||| | | | |||| | |||||||| || || ||||| |||||||||||||||||||||    
T  53840424 gtgcatgcagaccga-taagcgtgttgcgctctttttttgaaaacaagttgcaattgcatagaaattatat 53840355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 54046438 - 54046605
Alignment:
Q  155 gttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctagtaggatatct 252  Q
    ||||||||| || ||||||| |||||||||||||| |||||||||| | | |||||||||||||||||| |||||  |||| || | ||| | |||| ||    
T  54046438 gttgaaaataaactaaaattatatcattactaattattctaagaacatttttttttatataggttacaaaagatgaatcaactg-tttagcacgatacct 54046536  T
Q  253 gtgcatacgaacgagtgaccatgtttcactc-tttttatggaagcaagtcgcaattgcatagaaattat 320  Q
    ||||||||| | | |||| |||||| | ||| ||||| |||||||||||| ||||||||||||||||||    
T  54046537 gtgcatacggaagggtgaacatgttgcgctcttttttttggaagcaagtcacaattgcatagaaattat 54046605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 359
Target Start/End: Original strand, 24571892 - 24572094
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttata-----taggttacaagagatgtcaaatgctctagtagga 247  Q
    ||||| |||||||||||||||  |||||||| |||||||| ||||||  ||||||| ||||     ||||||| ||||||||||||||||||||| ||      
T  24571892 ttgtttaaaatgaaataaaatcatatcattattaattgttttaagaatatctctttatatatacagtaggttataagagatgtcaaatgctctagcag-- 24571989  T
Q  248 tatctgtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattatatnnnnnnnngtctctgtattgatata 347  Q
       ||||||||| | |||||||| |  ||| | |||||||| ||||||||||||||||||| ||||||||||||         |||| ||||||||||||    
T  24571990 ---ctgtgcatatggacgagtgagcgcgttgcgctcttttt-tggaagcaagtcgcaattgtatagaaattata---aaaaaagtctatgtattgatata 24572082  T
Q  348 tgaataaaaata 359  Q
    ||||||||||||    
T  24572083 tgaataaaaata 24572094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 35765132 - 35765229
Alignment:
Q  50 gggcggatttggactttcaataccagtggggcacannnnnnnggtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||| ||||||||||||||||| |||||||||||       |||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  35765132 gggcgaatttggactttcaatactagtggggcacatttttttggtcaaataattaaataatattaaatttaataagaagttatatt-aaaatagttgta 35765229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 26509932 - 26510020
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctag 242  Q
    |||||||||||||| ||||||| |||||||| || |||| |||||| | ||||||| |||||||| ||||||||||||||||||||||||    
T  26509932 ttgttgaaaatgaactaaaattatatcattattagttgtcctaaga-catctctttctatatagggtacaagagatgtcaaatgctctag 26510020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 13216453 - 13216508
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  13216453 gtcaaataattaaataatattaaatttaataagaagttatattaaaaatagttgta 13216508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 14272516 - 14272418
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctagtaggata 249  Q
    |||||||||||||| || ||||  |||| || |||||||| |||||||  |||||| ||||||||||||||||||||  ||||||||||||| ||||||    
T  14272516 ttgttgaaaatgaactagaattaaatcaatagtaattgttataagaacaactctttctatataggttacaagagatgaatcaaatgctctagcaggata 14272418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 20526658 - 20526583
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagat 228  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||| ||  |||| || |||||||||||||||||||    
T  20526658 ttgttaaaaatgaactaaaattatatcattactaattgttctaaaaatatctcattctatataggttacaagagat 20526583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 45538117 - 45538172
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  45538117 gtcaaataattaaataatattaaattcaataagaagttatattaaaaatagttgta 45538172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 20526750 - 20526696
Alignment:
Q  94 tcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||    
T  20526750 tcaaataattaaataatactaaatttaataagaagttatattaaaaatggttgta 20526696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 24571805 - 24571859
Alignment:
Q  99 taattaaataatattaattctaataagaagttatattaaaaatagttgtaacaat 153  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||| ||||    
T  24571805 taattaaataatattaaatttaataagaagttatattaaaaatagctgtagcaat 24571859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 54046341 - 54046395
Alignment:
Q  94 tcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||||||||||||||| ||| | |||||||||||| |||||||||||||||||    
T  54046341 tcaaataattaaataatactaaatttaataagaagttgtattaaaaatagttgta 54046395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 32742584 - 32742635
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagt 144  Q
    ||||||||||||||||| ||||| | ||||||||| ||||||||||||||||    
T  32742584 gtcaaataattaaataaaattaaatttaataagaacttatattaaaaatagt 32742635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 53840617 - 53840558
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgtaacaa 152  Q
    |||||||||||| |||||||| | | ||||||||||||||||| |||||||||| |||||    
T  53840617 gtcaaataattatataatattgagtttaataagaagttatattgaaaatagttgcaacaa 53840558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 2158679 - 2158751
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    |||||||||||||  ||||||  ||||||| |||||||||  |||||  ||||||| ||||||||||||||||    
T  2158679 ttgttgaaaatgagctaaaataatatcattgctaattgttaaaagaagatctctttctatataggttacaaga 2158751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 354 - 382
Target Start/End: Complemental strand, 39907403 - 39907375
Alignment:
Q  354 aaaataggcttaattgcacttttggtccc 382  Q
    |||||||||||||||||||||||||||||    
T  39907403 aaaataggcttaattgcacttttggtccc 39907375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 9e-46; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 170 - 359
Target Start/End: Complemental strand, 13694361 - 13694174
Alignment:
Q  170 aaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagtaggatatctgtgcatacgaacgagtg 269  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||||||||||||| |||||| ||||||||| |||||||||    
T  13694361 aaattatatcattactaattgttctaagaacatctctttctatatagattacgagagatgtcaaatgctctagcaggatacctgtgcatatgaacgagtg 13694262  T
Q  270 accatgtttcactctttttatggaagcaagtcgcaattgcatagaaattatatnnnnnnnngtctctgtattgatatatgaataaaaata 359  Q
    | | |||| | |||| ||| ||||||||| ||||||||||||||||||||||         ||||| |||||||||||||||||||||||    
T  13694261 agcgtgttgcgctctctttttggaagcaaatcgcaattgcatagaaattata--aaaaaaagtctccgtattgatatatgaataaaaata 13694174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 321
Target Start/End: Complemental strand, 10160219 - 10160050
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctagtaggatat 250  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||| || |||||||||||||||||  ||||||| | ||| | ||||     
T  10160219 ttgttgaaaatgaattaaaattatatcattactaattattctaagaacatctctttctacataggttacaagagatgaatcaaatgttgtagcatgatac 10160120  T
Q  251 ctgtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattata 321  Q
       |||||||| ||| |||| |  ||| | |||||||| | |||||||||||||||||| |||||||||||    
T  10160119 tcatgcatacggacgggtgagcgcgttgc-ctctttttttagaagcaagtcgcaattgcgtagaaattata 10160050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 10160312 - 10160251
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgtaacaatt 154  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||| |||||    
T  10160312 gtcaaataattaaataatattaaatttaatcagaagttatattaaaaatagttgtagcaatt 10160251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 31860733 - 31860804
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaag 224  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||| ||| ||| |||||||    
T  31860733 ttgttgaaaatgaactaaaattatatcattactatttgttctaagaacatctctttctatctagcttacaag 31860804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 8730333 - 8730278
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||||||||||||||||||||| | |||| |||||| ||||||||||||||||||    
T  8730333 gtcaaataattaaataatattaaatttaattagaagtcatattaaaaatagttgta 8730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 15697664 - 15697532
Alignment:
Q  190 gttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctagtaggatatctgtgcatacgaacgagtgaccatgtttcactctttt 287  Q
    |||||||| || |||||||||||||||||| ||| | |||  ||||||| | ||| | |||||| ||||||||| | | || | | | || | |||||||    
T  15697664 gttctaagcacgtctctttttatataggtttcaaaaaatgaatcaaatgttttagcatgatatccgtgcatacggatgggttagcgtattgcgctctttt 15697565  T
Q  288 tatggaagcaagtcgcaattgcatagaaattata 321  Q
    | ||||||||||||||||||||||||||||||||    
T  15697564 t-tggaagcaagtcgcaattgcatagaaattata 15697532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 9367805 - 9367753
Alignment:
Q  96 aaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||||||||||||| ||| | ||||||||||||||||||||| ||||||||    
T  9367805 aaataattaaataatagtaaatataataagaagttatattaaaagtagttgta 9367753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 45867635 - 45867707
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    ||||||| |||||  |||||||| ||| |||||||||||||||||||| ||| ||||||||||  ||||||||    
T  45867635 ttgttgagaatgagttaaaattgcatcgttactaattgttctaagaacatctatttttatatacattacaaga 45867707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 9370713 - 9370764
Alignment:
Q  177 atcattactaattgttctaagaacttctctttttatataggttacaagagat 228  Q
    ||||||||||||| |||||||||| ||||||| |||||| |||||| |||||    
T  9370713 atcattactaattattctaagaacgtctctttctatatatgttacaggagat 9370764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 36429995 - 36430050
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||||| ||||| |||| ||| | ||||||||| ||||||||||||||||||||    
T  36429995 gtcaaatacttaaaaaatactaaatttaataagaaattatattaaaaatagttgta 36430050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 43964468 - 43964413
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||||| ||||||||||||||| | |||| ||||||  |||||||||||||||||    
T  43964468 gtcaaattattaaataatattaaatttaattagaagtcgtattaaaaatagttgta 43964413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 14230164 - 14230092
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    |||||||||||||  ||||||| ||| |||||||| |||| ||||||| | ||||| ||||||  ||||||||    
T  14230164 ttgttgaaaatgagctaaaattatattattactaactgttttaagaacatttctttctatatatcttacaaga 14230092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 157 - 321
Target Start/End: Original strand, 3855431 - 3855594
Alignment:
Q  157 tgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagtaggatatctgtgc 256  Q
    |||||||||| ||||||| |||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||| | | ||    
T  3855431 tgaaaatgaactaaaattatatcattactaattgtcctaagaacatctctttctgtataggttacaagagatgtcaaatgctctagcaggatacccgagc 3855530  T
Q  257 atacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattata 321  Q
    ||||| | | ||||   |||| | |||||||| ||||||||||||||||||||||||||||||||    
T  3855531 atacggatgggtgagtgtgttgcgctcttttt-tggaagcaagtcgcaattgcatagaaattata 3855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 153 - 320
Target Start/End: Original strand, 5467451 - 5467620
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctagtaggatat 250  Q
    |||||||||||||| ||||||| ||||||||||| |||||  || ||| ||||||| |||||||||||||| | |||  || |||||||||  ||||||     
T  5467451 ttgttgaaaatgaagtaaaattatatcattactatttgtttaaaaaacgtctctttctatataggttacaacacatgaatcgaatgctctatcaggatac 5467550  T
Q  251 ctgtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattat 320  Q
    | ||||||| | |||||||| | |||| | |||||||| ||||||||| |||||||||| ||||||||||    
T  5467551 ccgtgcatatggacgagtgagcgtgttgcgctctttttttggaagcaattcgcaattgcgtagaaattat 5467620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 3855308 - 3855353
Alignment:
Q  95 caaataattaaataatattaattctaataagaagttatattaaaaa 140  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||    
T  3855308 caaataattaaataatattaaatttaataagaagttatattaaaaa 3855353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 5467362 - 5467417
Alignment:
Q  97 aataattaaataatattaattctaataagaagttatattaaaaatagttgtaacaa 152  Q
    ||||||||||||||||||| | |||||| || ||||||||||||||||| ||||||    
T  5467362 aataattaaataatattaaatttaataaaaaattatattaaaaatagttataacaa 5467417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 321
Target Start/End: Original strand, 72618 - 72787
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatgtcaaatgctctagtaggatatct 252  Q
    |||||||||||||| ||||||  |||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||||||  | ||||  |    
T  72618 ttgttgaaaatgaagtaaaatcatatcattactaatttttctaagaatatctctttctatataggttacaagagatgtcaaatgctctaacatgatactt 72717  T
Q  253 gtgcatacgaacgagtgaccatgtttcactctttttatggaagc-aagtcgcaattgcatagaaattata 321  Q
    |||||||   |||||||| |  ||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  72718 gtgcataaagacgagtgagcgcgttgcactctttttttggaagcaaagtcgcaattgcatagaaattata 72787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 37044446 - 37044338
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctagtaggatat 250  Q
    |||||||||||||| ||| |||  ||||||||||| |||||||||||| |||||||  |||||||||||||||||||  ||||||| ||||| ||||||     
T  37044446 ttgttgaaaatgaactaatattacatcattactaactgttctaagaacatctctttcaatataggttacaagagatgaatcaaatgttctagcaggatac 37044347  T
Q  251 ctgtgcata 259  Q
    | |||||||    
T  37044346 ccgtgcata 37044338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 72526 - 72582
Alignment:
Q  92 ggtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||    
T  72526 ggtcaaatatttaaataatattaaatttaataagaagttatattaaaaatagttgta 72582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 31235998 - 31235944
Alignment:
Q  94 tcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||    
T  31235998 tcaaataattaaataatagtaaatataataagaagttatattaaaaatagttgta 31235944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 37044539 - 37044484
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||||||||||||||||| ||  | ||||||||||||||||||||||||||||||    
T  37044539 gtcaaataattaaataatactatatttaataagaagttatattaaaaatagttgta 37044484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 319
Target Start/End: Original strand, 16863294 - 16863461
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg--tcaaatgctctagtaggatat 250  Q
    |||||||||||||| |||||||  |||||| |||||||||| || ||  | ||||| |||||| ||||||||| |||  ||||||||||||  | ||||     
T  16863294 ttgttgaaaatgaattaaaattacatcattgctaattgttccaataa-atatctttctatatatgttacaagaaatgaatcaaatgctctaacatgatac 16863392  T
Q  251 ctgtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaatta 319  Q
      ||| ||||||||| ||||   |||| ||||| |||| | | ||| ||||||||||||||||||||||    
T  16863393 tcgtgtatacgaacgggtgagtgtgttgcactcgttttttaggagctagtcgcaattgcatagaaatta 16863461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 16859658 - 16859714
Alignment:
Q  96 aaataattaaataatattaattctaataagaagttatattaaaaatagttgtaacaa 152  Q
    ||||||||| |||||| ||| | |||||||||||||||| |||||||||| ||||||    
T  16859658 aaataattatataatactaaatttaataagaagttatataaaaaatagttataacaa 16859714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 27633221 - 27633174
Alignment:
Q  93 gtcaaataattaaataatattaattctaataagaagttatattaaaaa 140  Q
    |||||||||||||||||||||   | ||||||||||||||||||||||    
T  27633221 gtcaaataattaaataatattggatttaataagaagttatattaaaaa 27633174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 31235906 - 31235834
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    |||||||||||||  |||||||  ||||||||||||||||  |||||| ||||| | ||| || |||||||||    
T  31235906 ttgttgaaaatgagctaaaattacatcattactaattgtttcaagaacatctctctctatgtacgttacaaga 31235834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 32161450 - 32161378
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    ||||||||||||| |||||||   |||| |||||| ||||  |||||| |||||||||||| | |||||||||    
T  32161450 ttgttgaaaatgagataaaataacatcaatactaaatgttaaaagaacatctctttttatacaagttacaaga 32161378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 10498746 - 10498670
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg 229  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  10498746 ttgttgaaaatgaactaaaattatatcattactaattgttctaagaacatctctttctatataggttgcaagagatg 10498670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 359
Target Start/End: Complemental strand, 16644077 - 16643864
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggtt-------acaagagat--gtcaaatgctctagt 243  Q
    ||||| ||||| || ||||||| |||||||| ||||| |||||||||| ||||||||||||||||||       |||||||||   ||||||||| ||||    
T  16644077 ttgttaaaaataaattaaaattatatcattattaatttttctaagaacatctctttttatataggttacaatttacaagagattaatcaaatgctatagt 16643978  T
Q  244 aggatatctgtgcatacgaacgagtgaccatgtttcactctttttatggaagcaagtcgcaattgcatagaaattatatnnnnnnnngtctctgtattga 343  Q
    ||||||||   ||||| | ||| |||| ||  ||   |||||||| |||| ||||||||||||||| |||||||||||         |||||| ||||||    
T  16643977 aggatatc--cgcatatggacgggtgagcacattgtgctctttttttggatgcaagtcgcaattgcgtagaaattataaaaaaatatgtctctatattga 16643880  T
Q  344 tatatgaataaaaata 359  Q
    ||||||||||||||||    
T  16643879 tatatgaataaaaata 16643864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 43798202 - 43798278
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaagagatg 229  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||||| |||||||  ||||| ||||||| |||||    
T  43798202 ttgttgaaaatgaattaaaattgaatcattactaattgttttaagaacatctctttacatatatgttacaaaagatg 43798278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 37598854 - 37598713
Alignment:
Q  180 attactaattgttctaagaacttctctttttatatag---gttacaagagatg--tcaaatgctctagtaggatatctgtgcatacgaacgagtgaccat 274  Q
    |||| ||||||||| |||||| ||||||| ||||||    | |||||||||||  ||||||||||||| | |||||   |||||||||||| || | | |    
T  37598854 attattaattgttccaagaacatctctttctatatactacggtacaagagatgaatcaaatgctctagcaagatatacatgcatacgaacgggtaagcgt 37598755  T
Q  275 gtttcactctttttatggaagcaagtcgcaattgcatagaaat 317  Q
    ||| |||| ||||| || ||||| |||||||||||||||||||    
T  37598754 gttgcacttttttt-tgaaagcaggtcgcaattgcatagaaat 37598713  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 10498836 - 10498784
Alignment:
Q  96 aaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||||||||||||||||   | |||||| |||||||||||||||||||||||    
T  10498836 aaataattaaataatattgtatttaataaaaagttatattaaaaatagttgta 10498784  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 34190075 - 34190147
Alignment:
Q  153 ttgttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    |||||||||||||| ||||||  ||||||| |||||||||   ||||| ||||||| |||||| |||||||||    
T  34190075 ttgttgaaaatgaactaaaatgatatcattgctaattgttaatagaacatctctttctatataagttacaaga 34190147  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 37599838 - 37599790
Alignment:
Q  100 aattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||||||||| ||| | |||||||||||||||||||||||| |||||    
T  37599838 aattaaataatactaaatttaataagaagttatattaaaaataattgta 37599790  T

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Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 93882 - 93934
Alignment:
Q  96 aaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    ||||||| |||||||| ||| | ||||||||||||||||||||||||||||||    
T  93882 aaataatcaaataataataaatttaataagaagttatattaaaaatagttgta 93934  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 242469 - 242416
Alignment:
Q  94 tcaaataattaaataatattaattctaataagaagttatattaaaaatagttgta 148  Q
    |||||| ||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  242469 tcaaatgattaaataatattaaatttaataagaa-ttatattaaaaatagttgta 242416  T

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Target: scaffold0684 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 4156 - 4226
Alignment:
Q  155 gttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    |||||||||||  |||||||  || |||||||||| || ||||||| ||||||| |||||| |||||||||    
T  4156 gttgaaaatgagttaaaattacataattactaattattttaagaacatctctttctatatatgttacaaga 4226  T

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Target: scaffold0163 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 3962 - 3892
Alignment:
Q  155 gttgaaaatgaaataaaattgtatcattactaattgttctaagaacttctctttttatataggttacaaga 225  Q
    |||||||||||  |||||||  || |||||||||| || ||||||| ||||||| |||||| |||||||||    
T  3962 gttgaaaatgagttaaaattacataattactaattattttaagaacatctctttctatatatgttacaaga 3892  T

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