View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10705_low_7 (Length: 252)

Name: NF10705_low_7
Description: NF10705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10705_low_7
NF10705_low_7
[»] scaffold0132 (1 HSPs)
scaffold0132 (3-95)||(24702-24794)
[»] chr2 (21 HSPs)
chr2 (10-96)||(26897230-26897316)
chr2 (10-96)||(6856800-6856886)
chr2 (3-93)||(24286302-24286392)
chr2 (3-93)||(24292870-24292960)
chr2 (16-95)||(7559757-7559836)
chr2 (16-93)||(377698-377775)
chr2 (3-95)||(10160126-10160218)
chr2 (17-96)||(34070029-34070108)
chr2 (10-95)||(23068159-23068244)
chr2 (17-95)||(25375499-25375577)
chr2 (10-95)||(1284117-1284202)
chr2 (10-95)||(30344322-30344407)
chr2 (3-95)||(28855727-28855818)
chr2 (10-96)||(42248830-42248916)
chr2 (3-95)||(30658773-30658865)
chr2 (3-95)||(6297299-6297390)
chr2 (52-95)||(17327705-17327748)
chr2 (57-95)||(22845052-22845090)
chr2 (10-95)||(9785753-9785836)
chr2 (143-184)||(7269304-7269345)
chr2 (10-95)||(30635396-30635484)
[»] scaffold0357 (1 HSPs)
scaffold0357 (3-96)||(3752-3845)
[»] scaffold0327 (1 HSPs)
scaffold0327 (10-95)||(19628-19713)
[»] scaffold0205 (1 HSPs)
scaffold0205 (10-95)||(30870-30955)
[»] chr3 (38 HSPs)
chr3 (3-96)||(8223531-8223624)
chr3 (3-96)||(8197048-8197141)
chr3 (17-96)||(51922944-51923023)
chr3 (3-96)||(29824-29917)
chr3 (4-96)||(14425248-14425340)
chr3 (16-95)||(8070288-8070367)
chr3 (3-95)||(3034239-3034331)
chr3 (3-95)||(3693214-3693306)
chr3 (3-95)||(8888526-8888618)
chr3 (3-95)||(3673182-3673274)
chr3 (10-95)||(9706997-9707082)
chr3 (10-95)||(16749326-16749411)
chr3 (10-95)||(19776488-19776573)
chr3 (3-95)||(8883766-8883858)
chr3 (16-96)||(18350180-18350260)
chr3 (18-95)||(22758586-22758663)
chr3 (3-95)||(10585596-10585688)
chr3 (10-95)||(4106732-4106817)
chr3 (10-95)||(4110584-4110669)
chr3 (10-95)||(15965658-15965743)
chr3 (10-95)||(15969582-15969667)
chr3 (10-95)||(15973506-15973591)
chr3 (10-79)||(18699200-18699269)
chr3 (3-95)||(6595799-6595891)
chr3 (18-95)||(37438966-37439043)
chr3 (196-252)||(38052580-38052636)
chr3 (10-95)||(8488797-8488881)
chr3 (58-95)||(11997412-11997449)
chr3 (142-191)||(14264712-14264761)
chr3 (10-62)||(14671996-14672048)
chr3 (200-252)||(22238582-22238634)
chr3 (55-95)||(53358754-53358794)
chr3 (205-252)||(22239257-22239304)
chr3 (134-184)||(8004406-8004456)
chr3 (10-95)||(16055779-16055864)
chr3 (195-252)||(45244102-45244159)
chr3 (134-194)||(22754658-22754718)
chr3 (47-95)||(35456345-35456393)
[»] scaffold0015 (2 HSPs)
scaffold0015 (3-96)||(193672-193765)
scaffold0015 (10-96)||(187986-188072)
[»] chr8 (22 HSPs)
chr8 (10-95)||(19393137-19393222)
chr8 (16-96)||(16066622-16066702)
chr8 (4-96)||(22104272-22104364)
chr8 (3-95)||(8330769-8330861)
chr8 (3-95)||(34818112-34818204)
chr8 (3-95)||(4237747-4237839)
chr8 (3-95)||(4242486-4242578)
chr8 (16-96)||(4582701-4582781)
chr8 (19-95)||(31449271-31449347)
chr8 (3-95)||(43302090-43302182)
chr8 (3-95)||(37772303-37772395)
chr8 (10-95)||(18861976-18862061)
chr8 (10-95)||(21384347-21384432)
chr8 (10-95)||(21387767-21387852)
chr8 (10-79)||(21827361-21827430)
chr8 (10-95)||(23915095-23915180)
chr8 (18-92)||(25367395-25367469)
chr8 (18-95)||(21411634-21411711)
chr8 (18-95)||(21806126-21806203)
chr8 (16-76)||(25733590-25733650)
chr8 (196-252)||(44007570-44007626)
chr8 (210-252)||(44006396-44006438)
[»] chr5 (21 HSPs)
chr5 (2-95)||(8770838-8770931)
chr5 (3-96)||(26869719-26869812)
chr5 (3-96)||(21826819-21826912)
chr5 (3-95)||(557292-557384)
chr5 (3-95)||(562064-562156)
chr5 (3-95)||(32460950-32461042)
chr5 (3-95)||(36936917-36937009)
chr5 (3-95)||(36941671-36941763)
chr5 (16-95)||(41997273-41997352)
chr5 (16-95)||(42002042-42002121)
chr5 (3-95)||(13300896-13300988)
chr5 (3-95)||(31732133-31732225)
chr5 (10-95)||(10754053-10754138)
chr5 (3-95)||(21323382-21323474)
chr5 (18-95)||(23976993-23977070)
chr5 (18-95)||(3666526-3666601)
chr5 (29-95)||(15395246-15395312)
chr5 (10-95)||(36949388-36949473)
chr5 (47-96)||(41099170-41099219)
chr5 (16-95)||(24435589-24435668)
chr5 (3-95)||(12044536-12044633)
[»] chr1 (28 HSPs)
chr1 (3-96)||(14804100-14804193)
chr1 (3-95)||(22428602-22428693)
chr1 (22-96)||(14819587-14819661)
chr1 (3-93)||(26198954-26199044)
chr1 (3-89)||(16836698-16836784)
chr1 (10-80)||(2367646-2367716)
chr1 (10-80)||(2384667-2384737)
chr1 (3-95)||(1067077-1067169)
chr1 (3-95)||(40232794-40232886)
chr1 (10-95)||(19725312-19725395)
chr1 (3-95)||(13893912-13894004)
chr1 (3-95)||(41097364-41097456)
chr1 (16-95)||(19726975-19727053)
chr1 (10-96)||(21498254-21498340)
chr1 (10-95)||(39243429-39243514)
chr1 (10-95)||(39246984-39247069)
chr1 (3-95)||(3094685-3094777)
chr1 (10-95)||(1924460-1924545)
chr1 (10-95)||(20923474-20923559)
chr1 (3-95)||(17213850-17213942)
chr1 (22-94)||(33055651-33055723)
chr1 (21-95)||(41387381-41387455)
chr1 (197-252)||(37560774-37560829)
chr1 (16-81)||(26319593-26319658)
chr1 (195-252)||(31868332-31868389)
chr1 (47-96)||(52100627-52100676)
chr1 (61-95)||(8267258-8267292)
chr1 (142-191)||(32306320-32306369)
[»] scaffold1910 (1 HSPs)
scaffold1910 (16-96)||(475-555)
[»] chr7 (32 HSPs)
chr7 (16-96)||(838837-838917)
chr7 (16-96)||(1204017-1204097)
chr7 (18-96)||(19096865-19096944)
chr7 (10-96)||(846013-846099)
chr7 (10-96)||(853390-853476)
chr7 (10-96)||(1211394-1211480)
chr7 (3-94)||(29727211-29727302)
chr7 (18-95)||(8954673-8954750)
chr7 (3-95)||(27256833-27256925)
chr7 (3-95)||(40864769-40864861)
chr7 (16-96)||(36477586-36477659)
chr7 (18-95)||(8076661-8076738)
chr7 (10-95)||(14259609-14259694)
chr7 (10-95)||(16459787-16459872)
chr7 (10-95)||(18426530-18426615)
chr7 (18-95)||(20485198-20485275)
chr7 (18-95)||(20488559-20488636)
chr7 (16-95)||(9650366-9650445)
chr7 (10-79)||(14928058-14928127)
chr7 (10-79)||(15351524-15351593)
chr7 (10-95)||(45169337-45169422)
chr7 (195-252)||(48850479-48850536)
chr7 (195-252)||(4996415-4996472)
chr7 (196-252)||(4997171-4997227)
chr7 (3-71)||(47102135-47102203)
chr7 (143-191)||(11561527-11561575)
chr7 (60-95)||(9008810-9008845)
chr7 (205-251)||(33223220-33223266)
chr7 (142-191)||(2912107-2912156)
chr7 (10-95)||(32302442-32302527)
chr7 (35-95)||(1043847-1043907)
chr7 (57-89)||(11289434-11289466)
[»] chr4 (32 HSPs)
chr4 (3-95)||(9185090-9185182)
chr4 (3-95)||(14868474-14868566)
chr4 (3-95)||(14877368-14877460)
chr4 (3-95)||(9190955-9191047)
chr4 (3-95)||(14899022-14899114)
chr4 (10-96)||(15225768-15225854)
chr4 (3-96)||(26034784-26034877)
chr4 (3-95)||(34561020-34561112)
chr4 (4-95)||(7902517-7902608)
chr4 (10-79)||(10713543-10713612)
chr4 (10-79)||(10927313-10927382)
chr4 (10-95)||(12488401-12488486)
chr4 (10-95)||(14953461-14953546)
chr4 (10-95)||(15011222-15011307)
chr4 (3-95)||(3997468-3997560)
chr4 (3-95)||(8660809-8660901)
chr4 (19-95)||(31297901-31297977)
chr4 (16-95)||(13521391-13521470)
chr4 (18-80)||(41817393-41817455)
chr4 (21-95)||(47575276-47575350)
chr4 (10-79)||(25690597-25690666)
chr4 (134-191)||(31323526-31323583)
chr4 (195-252)||(53687700-53687757)
chr4 (47-95)||(39320202-39320250)
chr4 (10-62)||(18023224-18023276)
chr4 (140-191)||(10011709-10011760)
chr4 (140-191)||(10018850-10018901)
chr4 (57-95)||(32545533-32545571)
chr4 (57-95)||(52742630-52742668)
chr4 (58-95)||(55073797-55073834)
chr4 (196-252)||(9041871-9041927)
chr4 (196-252)||(55246560-55246616)
[»] scaffold0019 (1 HSPs)
scaffold0019 (10-96)||(30287-30373)
[»] chr6 (25 HSPs)
chr6 (10-96)||(26981198-26981284)
chr6 (10-96)||(27073588-27073674)
chr6 (3-96)||(14073731-14073824)
chr6 (13-95)||(24588584-24588666)
chr6 (3-96)||(18387528-18387621)
chr6 (10-95)||(16625019-16625104)
chr6 (3-95)||(6112165-6112257)
chr6 (18-95)||(19772418-19772495)
chr6 (16-95)||(15704317-15704396)
chr6 (10-95)||(22806954-22807039)
chr6 (10-79)||(22949835-22949904)
chr6 (10-79)||(22953791-22953860)
chr6 (10-79)||(23872279-23872348)
chr6 (10-79)||(23876235-23876304)
chr6 (10-95)||(31477110-31477195)
chr6 (16-95)||(27324467-27324544)
chr6 (10-93)||(2077415-2077498)
chr6 (10-76)||(16760985-16761051)
chr6 (199-252)||(19803250-19803303)
chr6 (195-245)||(19802531-19802581)
chr6 (200-252)||(1634941-1634993)
chr6 (46-95)||(15645337-15645386)
chr6 (203-247)||(1632074-1632118)
chr6 (57-89)||(2862884-2862916)
chr6 (47-95)||(15640950-15640998)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-96)||(199788-199879)
[»] scaffold0041 (1 HSPs)
scaffold0041 (3-95)||(35110-35202)
[»] scaffold0182 (1 HSPs)
scaffold0182 (16-95)||(9286-9365)
[»] scaffold0044 (2 HSPs)
scaffold0044 (3-96)||(81154-81247)
scaffold0044 (3-96)||(64756-64849)
[»] scaffold0034 (1 HSPs)
scaffold0034 (10-95)||(121169-121254)
[»] scaffold0060 (2 HSPs)
scaffold0060 (3-95)||(47379-47471)
scaffold0060 (3-95)||(52323-52415)
[»] scaffold0155 (1 HSPs)
scaffold0155 (3-69)||(22271-22337)
[»] scaffold0572 (1 HSPs)
scaffold0572 (10-95)||(10382-10467)
[»] scaffold0144 (1 HSPs)
scaffold0144 (10-95)||(7480-7565)
[»] scaffold0011 (1 HSPs)
scaffold0011 (10-95)||(127006-127091)
[»] scaffold0070 (2 HSPs)
scaffold0070 (3-95)||(59022-59114)
scaffold0070 (63-95)||(63284-63316)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-95)||(71740-71820)
[»] scaffold0431 (1 HSPs)
scaffold0431 (18-95)||(14883-14960)
[»] scaffold0415 (1 HSPs)
scaffold0415 (10-95)||(1091-1176)
[»] scaffold0229 (1 HSPs)
scaffold0229 (10-95)||(10832-10917)
[»] scaffold0157 (1 HSPs)
scaffold0157 (10-95)||(31991-32076)
[»] scaffold0141 (1 HSPs)
scaffold0141 (10-95)||(13418-13503)
[»] scaffold0124 (1 HSPs)
scaffold0124 (10-95)||(21392-21477)
[»] scaffold0628 (1 HSPs)
scaffold0628 (3-95)||(6984-7076)
[»] scaffold0452 (1 HSPs)
scaffold0452 (19-95)||(12374-12450)
[»] scaffold0061 (1 HSPs)
scaffold0061 (3-95)||(49390-49482)
[»] scaffold0017 (1 HSPs)
scaffold0017 (3-95)||(149152-149244)
[»] scaffold0575 (1 HSPs)
scaffold0575 (10-95)||(5287-5372)
[»] scaffold0031 (1 HSPs)
scaffold0031 (10-79)||(35433-35502)
[»] scaffold0020 (1 HSPs)
scaffold0020 (3-95)||(646-738)
[»] scaffold0018 (1 HSPs)
scaffold0018 (16-79)||(21916-21979)
[»] scaffold0292 (1 HSPs)
scaffold0292 (16-95)||(7776-7855)


Alignment Details
Target: scaffold0132 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 24794 - 24702
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24794 agaggaaaagcacaggaatcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 24702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 26897230 - 26897316
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  26897230 aagcacaggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaatag 26897316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 6856800 - 6856886
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| |||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6856800 aagcacaggaagcatcaactgtgaatttcggtccccagaatgtattgtgtgagctctctatttatagagaaatttcacaactaatag 6856886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 24286392 - 24286302
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaa 93  Q
    |||||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  24286392 agaggaaaagcacaggaagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaa 24286302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 24292960 - 24292870
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaa 93  Q
    |||||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  24292960 agaggaaaagcacaggaagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaa 24292870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 7559836 - 7559757
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7559836 aggaagcatcaactgtgaatttaagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaata 7559757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 377775 - 377698
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaa 93  Q
    ||||||||||||||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||| |||||||||||    
T  377775 aggaagcatcaactgtgaatttcggtgtccgtaatgcattatgtgagctctctatttatagaaaaacttcacaactaa 377698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 10160218 - 10160126
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  10160218 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttgtagagaaagttcacaactaata 10160126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 34070029 - 34070108
Alignment:
Q  17 ggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||||||||||||| ||||||| ||   ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  34070029 ggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaatag 34070108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 23068244 - 23068159
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  23068244 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 23068159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 25375499 - 25375577
Alignment:
Q  17 ggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||| ||||||||||||||||| | ||  |||||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  25375499 ggaatcatcaactgtgaatttcagtgtgtagaatgcactgtgtaagctctctatttatagagaaaattcacaactaata 25375577  T

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Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 1284117 - 1284202
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  1284117 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 1284202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 30344407 - 30344322
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  30344407 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 30344322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 28855727 - 28855818
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || |||||||| ||||||||||||||||||| ||   ||||||| | |||||||||||||||||||| |||| |||||||||||||    
T  28855727 agaggaaaaacataggaatcatcaactgtgaatttcggtgtgtcgaatgcactttgtgagctctctatttatagggaaa-ttcacaactaata 28855818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 42248830 - 42248916
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| |||||||||||| |||| ||||||| ||   ||||||||||||||||| ||||||||||||||||| |||  |||||||||    
T  42248830 aagcacaggaagcatcaattgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttccgaactaatag 42248916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 30658773 - 30658865
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || |||| ||||||||||||||||||||  |  |   ||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  30658773 agaggacaaacatatgaagcatcaactgtgaatttgtgtatgtggaatgcactgtgtgagctctctatttatggagaaagttcacaactaata 30658865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 6297390 - 6297299
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| | ||||||||||||||||||||| | ||  |||| | | |||||||||||||||||| |||||||| || ||||||||||    
T  6297390 agaggaaaagcacatgaagcatcaactgtgaatttctgtgtatagaaagaactgtgtgagctctctattt-tagagaaagttgacaactaata 6297299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 17327705 - 17327748
Alignment:
Q  52 cattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||||||||||||||||||||||||| || ||||||||||    
T  17327705 cattgtgtgagctctctatttatagagaaaatttacaactaata 17327748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 22845052 - 22845090
Alignment:
Q  57 tgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  22845052 tgtgagctctctatttatagagaaaattcacaactaata 22845090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 9785753 - 9785836
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  | ||||||   |||||| ||||||||||||| || | || ||||||||||    
T  9785753 aagcacaggaagcatcaactgtgaatttcggtgtgtaaaatgca--ctgtgagttctctatttatagggatagtttacaactaata 9785836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 7269304 - 7269345
Alignment:
Q  143 tattttcggtattttagttgggcacgagcaaaatctgttggg 184  Q
    |||||||||||||| |||||||| |||||||||| |||||||    
T  7269304 tattttcggtatttcagttgggcgcgagcaaaatgtgttggg 7269345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 30635396 - 30635484
Alignment:
Q  10 aagcataggaagcatcaactgtgaa-tttcggagtccagaatgcattgtgtgagctct--ctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||| |||||| ||  | |||||| | ||||||||||   |||||||| ||||| |||||||||||||    
T  30635396 aagcacaggaagcatcaactgtgaattttcggtgtgtaaaatgcactttgtgagctctaaatatttataaagaaaattcacaactaata 30635484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 3845 - 3752
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3845 agaggaaaagcacaggaagcatcaactgtgaatttcggggttcagaatgcattgtgtgagctctctatttatagagaaacttcacaactaatag 3752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 19713 - 19628
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19713 aagcacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaata 19628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 30870 - 30955
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30870 aagcataggaagcatcaactgtgaatttcggtgtcttgaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 30955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 8223531 - 8223624
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  8223531 agaggaaaagcacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaatag 8223624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 8197048 - 8197141
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  8197048 agaggaaaagcacaggaagcatcaactgtgaatttcggggtccataatgcattgtgtgagccctctatttatagagaaacttcacaactaatag 8197141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 51922944 - 51923023
Alignment:
Q  17 ggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  51922944 ggaatcatcaactgtgaatttcggtgtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaatag 51923023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 29824 - 29917
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||| ||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  29824 agaggaaaagcacaggaatcatcatctgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagaaaaatttcacaactaatag 29917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 14425340 - 14425248
Alignment:
Q  4 gaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| ||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  14425340 gaggaaaagcacaggaatcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttctagagaaacttcacagctaatag 14425248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 8070288 - 8070367
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  8070288 aggaagcatcaactgtgaatttcggtgtctggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 8070367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 3034239 - 3034331
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  3034239 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 3034331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 3693214 - 3693306
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  3693214 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 3693306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 8888526 - 8888618
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  8888526 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 8888618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 3673182 - 3673274
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||| | ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  3673182 agaggaaaaacacaggaagcatcaactgtgaatttcagtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 3673274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 9707082 - 9706997
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  9707082 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 9706997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 16749411 - 16749326
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  16749411 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 16749326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 19776488 - 19776573
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  19776488 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 19776573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 8883766 - 8883858
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| ||||| |||||| |||||||||||||| |||||||||||||    
T  8883766 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtaagctctttatttatagagaaagttcacaactaata 8883858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 18350260 - 18350180
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||||||||| ||||||| ||   ||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  18350260 aggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcgcaactaatag 18350180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 22758663 - 22758586
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  22758663 gaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 22758586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 10585688 - 10585596
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || |||||||||||||||||||||| || ||    || ||| ||||||||||||||||||||||||||| |||||||||||||    
T  10585688 agaggaaaaacacaggaagcatcaactgtgaattttggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 10585596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 4106817 - 4106732
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| ||| |||| |||||||||||||||| | || ||||||||||    
T  4106817 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaata 4106732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 4110669 - 4110584
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| ||| |||| |||||||||||||||| | || ||||||||||    
T  4110669 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaata 4110584  T

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Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 15965658 - 15965743
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| ||| |||| |||||||||||||||| | || ||||||||||    
T  15965658 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaata 15965743  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 15969582 - 15969667
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| ||| |||| |||||||||||||||| | || ||||||||||    
T  15969582 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaata 15969667  T

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Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 15973506 - 15973591
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| ||| |||| |||||||||||||||| | || ||||||||||    
T  15973506 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaata 15973591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 18699269 - 18699200
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| |||||||||||| |||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  18699269 aagcacaggaagcatcaagtgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 18699200  T

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Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 6595891 - 6595799
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || |||||||||||||| ||||||| |  ||  | |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  6595891 agaggaaaaacacaggaagcatcaactatgaattttgatgtgtaaaatgcactctgtgagctctctatttatagagaaaattcacaactaata 6595799  T

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Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 37439043 - 37438966
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||| |||||||||||||||||| ||  |||||| | |||||||| |||||||||||||||| | || ||||||||||    
T  37439043 gaagtatcaactgtgaatttcggcgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaata 37438966  T

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Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 38052580 - 38052636
Alignment:
Q  196 gaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    ||||||||||||| ||||||| ||||||| ||||| ||||||| |||||||||||||    
T  38052580 gaaaattgcttttctgacattgaaaacgtcatattaacatatggaaatgacattttt 38052636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 8488881 - 8488797
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||||||||||||| | |||||| ||  |||||| | |||||||| |||||||||||||||| | || ||||||||||    
T  8488881 aagcacaggaagcatcaactgtaactttcggtgtgtagaatg-actgtgtgagttctctatttatagagatagtttacaactaata 8488797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 11997449 - 11997412
Alignment:
Q  58 gtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11997449 gtgagctctctatttatagagaaaattcacaactaata 11997412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 14264761 - 14264712
Alignment:
Q  142 gtattttcggtattttagttgggcacgagcaaaatctgttgggtaaagag 191  Q
    |||||||||||||||||||| ||| |||||||||| ||||| ||||||||    
T  14264761 gtattttcggtattttagttaggcgcgagcaaaatatgttgagtaaagag 14264712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 14671996 - 14672048
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgag 62  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| ||||||||    
T  14671996 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcagtgtgtgag 14672048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 22238582 - 22238634
Alignment:
Q  200 attgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    ||||||||||||||||| | ||||| |||||||| |||||||||||| |||||    
T  22238582 attgcttttttgacatttagaacgtcatattgacttatgaaaatgacgttttt 22238634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 53358754 - 53358794
Alignment:
Q  55 tgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  53358754 tgtgtgagctctctatttataaagaaagttcacaactaata 53358794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 22239304 - 22239257
Alignment:
Q  205 ttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    |||| |||||||||||| || ||||||||| |||||||||||||||||    
T  22239304 ttttctgacattcaaaatgtcatattgacacatgaaaatgacattttt 22239257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 8004406 - 8004456
Alignment:
Q  134 acgcatgagtattttcggtattttagttgggcacgagcaaaatctgttggg 184  Q
    ||||| ||||||||||| ||||| |||||||| |||||||||| |||||||    
T  8004406 acgcaagagtattttcgatatttcagttgggcgcgagcaaaatgtgttggg 8004456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 16055779 - 16055864
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||||||||||||||  |||||| ||  | |||||||| || |||| ||| ||||||||||||| ||| | |||||||    
T  16055779 aagcacaggaagcatcaactgtgtttttcggcgtgaaaaatgcattttgagagccctccatttatagagaaagttctctactaata 16055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 45244159 - 45244102
Alignment:
Q  195 agaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    ||||||||| ||||| |||||||||||| | |||||||||  || |||||||||||||    
T  45244159 agaaaattggtttttagacattcaaaacttcatattgacacttgtaaatgacattttt 45244102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 22754718 - 22754658
Alignment:
Q  134 acgcatgagtattttcggtattttagttgggcacgagcaaaatctgttgggtaaagagtgg 194  Q
    |||||||||||||||| ||||| |||||  || |||||||||| |||||||  ||||||||    
T  22754718 acgcatgagtattttcagtattctagttacgcgcgagcaaaatatgttgggagaagagtgg 22754658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 35456393 - 35456345
Alignment:
Q  47 gaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||| | |||||  |||||||||||||||||| |||||||||||||    
T  35456393 gaatgcactatgtgaattctctatttatagagaaaattcacaactaata 35456345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 193765 - 193672
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  193765 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaatag 193672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 188072 - 187986
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| ||||||||||||||||| ||||||| |||| ||||||||||||||| | || |||||||||||||| ||||||||| ||||    
T  188072 aagcacaggaagcatcaactgtgtatttcggggtcctgaatgcattgtgtgaaccctatatttatagagaaacttcacaactgatag 187986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 19393222 - 19393137
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19393222 aagcacaggaagcatcaactgtgaatttcggggtccataatgcattgtgtgagatctctatttatagagaaatttcacaactaata 19393137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 16066702 - 16066622
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  16066702 aggaagcatcaactgtgaatttcggtgtccatagtgcattgtgtgagctctctatttatagagaaacttcacaactaatag 16066622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 22104272 - 22104364
Alignment:
Q  4 gaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| ||||| ||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  22104272 gaggaaaagcacaggaatcatcaaatgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaatag 22104364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 8330861 - 8330769
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||||||||||||||||||||||| ||   ||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  8330861 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtatggaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 8330769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 34818204 - 34818112
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||||||||||||||||||||||| || | ||| ||| ||||||| ||||||||||||||||||| |||||||||||||    
T  34818204 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtaccgaaagcactgtgtgaactctctatttatagagaaagttcacaactaata 34818112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 4237839 - 4237747
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| |    ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  4237839 agaggaaaaacacaggaagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 4237747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 4242578 - 4242486
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| |    ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  4242578 agaggaaaaacacaggaagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 4242486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 4582781 - 4582701
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||||||||| ||||||| ||   ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  4582781 aggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaatag 4582701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 31449347 - 31449271
Alignment:
Q  19 aagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  31449347 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 31449271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 43302182 - 43302090
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || |||||||||||||||||||||||||||  ||   ||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  43302182 agaggaaaaacataggaagcatcaactgtgaatttcgatgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaagtaata 43302090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 37772303 - 37772395
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||    || ||| ||||||||||||||||||||||||||| |||||||||||||    
T  37772303 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 37772395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 18862061 - 18861976
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  18862061 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 18861976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 21384347 - 21384432
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  | |||||| |||||||| |||||||||||||||| | || ||||||||||    
T  21384347 aagcacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaata 21384432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 21387767 - 21387852
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  | |||||| |||||||| |||||||||||||||| | || ||||||||||    
T  21387767 aagcacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaata 21387852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 21827430 - 21827361
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  21827430 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 21827361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 23915095 - 23915180
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||| ||| ||||||||||||| || | || ||||||||||    
T  23915095 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaata 23915180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 25367469 - 25367395
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaacta 92  Q
    |||||||||| |||||||||||| ||   ||| ||| ||||||| ||||||||||||||||||| ||||||||||    
T  25367469 gaagcatcaattgtgaatttcggtgtatggaaagcactgtgtgaactctctatttatagagaaagttcacaacta 25367395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 21411634 - 21411711
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||| ||  |||||||| | || ||| |||||||||||||||| | || ||||||||||    
T  21411634 gaagcatcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaata 21411711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 21806126 - 21806203
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||| ||  |||||||| | || ||| |||||||||||||||| | || ||||||||||    
T  21806126 gaagcatcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaata 21806203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 25733650 - 25733590
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatag 76  Q
    ||||||||||||||||||||||||| ||  |||||||| | |||||| |||||||||||||    
T  25733650 aggaagcatcaactgtgaatttcggtgtgtagaatgcactttgtgagttctctatttatag 25733590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 44007626 - 44007570
Alignment:
Q  196 gaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    |||||||| |||||||||||||||||| | ||||||||||||  ||||||| |||||    
T  44007626 gaaaattgtttttttgacattcaaaacatcatattgacatatagaaatgacgttttt 44007570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 44006396 - 44006438
Alignment:
Q  210 tgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    ||||||||||||| | ||||||||||||||||||||| |||||    
T  44006396 tgacattcaaaacttcatattgacatatgaaaatgacgttttt 44006438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 8770838 - 8770931
Alignment:
Q  2 tagaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||| || || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8770838 tagaggaaaaacacaggaagcatcaactgtgaatttcagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaata 8770931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 26869812 - 26869719
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  26869812 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaatag 26869719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 21826819 - 21826912
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  21826819 agaggaaaagcacaggaatcatcaactgtgaatttcggggtgtagaatgcattgtgtgagctctctatttatagagaaacttcacagctaatag 21826912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 557292 - 557384
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  557292 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 557384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 562064 - 562156
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  562064 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 562156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 32461042 - 32460950
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  32461042 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtatggaatgcattgtgtgagctctctatttatagataaagttcacaactaata 32460950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 36937009 - 36936917
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  36937009 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 36936917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 36941763 - 36941671
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  36941763 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 36941671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 41997273 - 41997352
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  41997273 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 41997352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 42002042 - 42002121
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  42002042 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 42002121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 13300988 - 13300896
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| | ||||||||||||||||||||||| ||   ||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  13300988 agaggaaaagcacatgaagcatcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 13300896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 31732133 - 31732225
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||||||||||||||||||||||| ||    || ||| ||||||||||||||||||||||||||| |||||||||||||    
T  31732133 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 31732225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 10754053 - 10754138
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  10754053 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 10754138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 21323474 - 21323382
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||| | ||||||||||||||||||||||||| ||   |||  || ||||||||||||||||||||||||||| |||||||||||||    
T  21323474 agaggaaaagtacaggaagcatcaactgtgaatttcggtgtatggaaaacactgtgtgagctctctatttatagagaaagttcacaactaata 21323382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 23977070 - 23976993
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||| | ||   ||||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  23977070 gaagcatcaactgtgaatttcagtgtatggaatgcactgtgtgagctctctatttatagagaaagttcactactaata 23976993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 3666526 - 3666601
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||  ||||||||||| ||  |||||||  || |||||||||||||||||||||||| |||||||||||||    
T  3666526 gaagcatcaa--gtgaatttcggtgtgtagaatgccctgcgtgagctctctatttatagagaaaattcacaactaata 3666601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 15395312 - 15395246
Alignment:
Q  29 tgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||| ||  ||||||||||||  | |||||||||||||||||||||||| |||||||||||||    
T  15395312 tgtgaattccgttgtccagaatgcaccgagtgagctctctatttatagagaaaattcacaactaata 15395246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 36949388 - 36949473
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||| |||||| ||||| |||||| ||   ||||||| ||||||||||||||||||||||| ||| |||| ||||||||    
T  36949388 aagcacaggaaacatcaattgtgattttcggtgtgttgaatgcactgtgtgagctctctatttatagaaaaaattcataactaata 36949473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 41099170 - 41099219
Alignment:
Q  47 gaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  41099170 gaatgcattgtgtgagccctctatttatagagaaacttcccaactaatag 41099219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 24435668 - 24435589
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||| |||||| | ||||| ||  |||||||| |||| |||||||||||||||||||||| ||| | |||||||    
T  24435668 aggaatcatcgactgtggaattcggtgtgaagaatgcactgtgagagctctctatttatagagaaagttctctactaata 24435589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 12044633 - 12044536
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattg-----tgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || |||||||||||||| |||||||||| ||   ||||||| ||     |||||||||||| ||| |||||||| |||||||||||||    
T  12044633 agaggaaaaacacaggaagcatcaactttgaatttcggtgtgtggaatgcactgctgtgtgtgagctctctttttctagagaaaattcacaactaata 12044536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 14804100 - 14804193
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14804100 agaggaaaagcacaggaatcatcaactgtgaatttcggggtctagaatgcattgcgtgagctctctatttatagagaaatttcacaactaatag 14804193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 22428693 - 22428602
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22428693 agaggaaaagcacaggaatcatcaactgtgaatttcgg-gtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaata 22428602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 14819587 - 14819661
Alignment:
Q  22 catcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14819587 catcaactgtgaatttcggggtctagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 14819661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 26198954 - 26199044
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaa 93  Q
    |||||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26198954 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaa 26199044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 16836784 - 16836698
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaa 89  Q
    |||||| ||||| | ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  16836784 agaggaaaagcacatgaagcatcaactgtgaatttcggtgtccagaatgcactgtgtgagctctctatttatagagaaaattcacaa 16836698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 2367646 - 2367716
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaa 80  Q
    ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  2367646 aagcacaggaagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaa 2367716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 2384737 - 2384667
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaa 80  Q
    ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  2384737 aagcacaggaagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaa 2384667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 1067077 - 1067169
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||  ||||| |||||| |||||||| |||||||||||||||||| |||||||||||||    
T  1067077 agaggaaaaacacaggaagcatcaactgtgaatttcgttgtccataatgcaatgtgtgagttctctatttatagagaaaattcacaactaata 1067169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 40232886 - 40232794
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||| | ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  40232886 agaggaaaagtacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 40232794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 19725395 - 19725312
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| | |||||||||| ||||||| |||||||||||||||||||  ||||||||||||    
T  19725395 aagcacaggaagcatcaactgtgaatttcggtgcccagaatgcaatgtgtgaactctctatttatagagaaa--tcacaactaata 19725312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 13893912 - 13894004
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || |||||||||||||||||| |||| | ||  |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  13893912 agaggaaaaacacaggaagcatcaactgtgattttcagtgtgtagaatgcattgtgtgaactctctatttatagagaaaattcacaactaata 13894004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 41097456 - 41097364
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| | ||||||||||||||||||||||| ||   ||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  41097456 agaggaaaagcacatgaagcatcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 41097364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 19726975 - 19727053
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  19726975 aggaagcatcaactgtgaatttcggtatccagaatgc-ttgtgtgagctctctatttatcgagaaatcacacaactaata 19727053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 21498254 - 21498340
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| ||||||||||||||||| ||||||| ||   ||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  21498254 aagcacaggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaatag 21498340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 39243514 - 39243429
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  39243514 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 39243429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 39247069 - 39246984
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  39247069 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 39246984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 3094685 - 3094777
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || |||||| |||||||||||||||||| ||   ||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  3094685 agaggaaaaacacaggaagtatcaactgtgaatttcggtgtgtggaatgcactgtgtgaactctctatttatagagaaagttcacaactaata 3094777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 1924545 - 1924460
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  1924545 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 1924460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 20923559 - 20923474
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  20923559 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 20923474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 17213942 - 17213850
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || |||||||| |||||||| | |||||||| ||   ||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  17213942 agaggaaaaacataggaaacatcaactataaatttcggtgtatcgaatgtactgtgtgagctctctatttatagagaaagttcacaactaata 17213850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 33055651 - 33055723
Alignment:
Q  22 catcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaat 94  Q
    |||||||||||||||| || ||  |||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  33055651 catcaactgtgaattttggtgtatagaatgcactgtgtgaactctctatttatagagaaagttcacaactaat 33055723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 41387455 - 41387381
Alignment:
Q  21 gcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  41387455 gcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 41387381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 37560829 - 37560774
Alignment:
Q  197 aaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    |||||| ||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  37560829 aaaattacttttttgacattcaaaacgtcatattgacatattgaaatgacattttt 37560774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 26319658 - 26319593
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaa 81  Q
    |||||||||||||||||  ||| || ||  ||||||||||||||||||||| ||||||||||||||    
T  26319658 aggaagcatcaactgtgttttttggtgtgaagaatgcattgtgtgagctctttatttatagagaaa 26319593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 31868332 - 31868389
Alignment:
Q  195 agaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    |||||||||||||||||| ||||||||||| || |||||| ||||||||||| |||||    
T  31868332 agaaaattgcttttttgatattcaaaacgtcatgttgacacatgaaaatgacgttttt 31868389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 52100676 - 52100627
Alignment:
Q  47 gaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  52100676 gaatgcattgtatgagccctctatttatagagaaacttcacaactaatag 52100627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 95
Target Start/End: Complemental strand, 8267292 - 8267258
Alignment:
Q  61 agctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||| |||||||||||||    
T  8267292 agctctctatttatagagaaagttcacaactaata 8267258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 32306369 - 32306320
Alignment:
Q  142 gtattttcggtattttagttgggcacgagcaaaatctgttgggtaaagag 191  Q
    |||||||||||| || |||||||| |||||||||| | ||||||||||||    
T  32306369 gtattttcggtaattcagttgggcccgagcaaaatgtattgggtaaagag 32306320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 475 - 555
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  475 aggaagcatcaactgtgaatttcggtatccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaatag 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 838917 - 838837
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  838917 aggaagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaatag 838837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 1204097 - 1204017
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1204097 aggaagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaatag 1204017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 19096865 - 19096944
Alignment:
Q  18 gaagcatcaactgtgaattt-cggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19096865 gaagcatcaactgtgaattttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 19096944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 846099 - 846013
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  846099 aagcacaggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaatag 846013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 853476 - 853390
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  853476 aagcacaggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaatag 853390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 1211480 - 1211394
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1211480 aagcacaggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaatag 1211394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 29727302 - 29727211
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaat 94  Q
    |||||| ||||| ||||| |||||||||||||||| || ||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  29727302 agaggaaaagcacaggaaacatcaactgtgaattttggtgtccagaatgcaccgtgtgagctctctatttatagagaaaattcacaactaat 29727211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 8954750 - 8954673
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||| ||||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8954750 gaagcatcaactgggaatttcggggttcggaatgcattgtgtgagctctctatttatagagaaacttcacaactaata 8954673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 27256833 - 27256925
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||||||||||||||||||||||| ||   ||| ||| | ||||||||||||||||||||||||| |||||||||||||    
T  27256833 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaata 27256925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 40864861 - 40864769
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||||||||||||||||||||||| ||   ||| | | ||||||||||||||||||||||||||| |||||||||||||    
T  40864861 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagtactgtgtgagctctctatttatagagaaagttcacaactaata 40864769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 36477586 - 36477659
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  36477586 aggaagcatcaactgtgaatttcggtgt-------gcattgtgtgagctctctatttatagagaaatttcacaactaatag 36477659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 8076661 - 8076738
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  8076661 gaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacatctaata 8076738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 14259609 - 14259694
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||||||||||||||||||||  |||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  14259609 aagcacaggaagcatcaactgtgaatttcaaagtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 14259694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 16459872 - 16459787
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| ||||||||||||| || | || ||||||||||    
T  16459872 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagggatagtttacaactaata 16459787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 18426530 - 18426615
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  18426530 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 18426615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 20485198 - 20485275
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  20485198 gaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 20485275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 20488559 - 20488636
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  20488559 gaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 20488636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 9650445 - 9650366
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||   |   ||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  9650445 aggaagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaata 9650366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 14928127 - 14928058
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| ||||||||  |||||||||||||||    
T  14928127 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagaga 14928058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 15351593 - 15351524
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| ||||||||  |||||||||||||||    
T  15351593 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagaga 15351524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 45169422 - 45169337
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||| | |||||||| |||||||||||||||| | || ||||||||||    
T  45169422 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaata 45169337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 48850479 - 48850536
Alignment:
Q  195 agaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    |||||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  48850479 agaaaattgcatttctgacattcaaaacgttatattgacacatgaaaatgacattttt 48850536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 4996415 - 4996472
Alignment:
Q  195 agaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||    
T  4996415 agaagattgcttttctgacattcaaaacgtcatattgacacatgaaaatgacgttttt 4996472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 4997227 - 4997171
Alignment:
Q  196 gaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    ||||||||||||||||||||||||||| | ||||||||| ||| ||||||| |||||    
T  4997227 gaaaattgcttttttgacattcaaaacttcatattgacacatggaaatgacgttttt 4997171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 47102135 - 47102203
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatt 71  Q
    |||||| || || ||||||||||||||||||||||||| ||   ||||||| |||||||||||||||||    
T  47102135 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatt 47102203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 11561527 - 11561575
Alignment:
Q  143 tattttcggtattttagttgggcacgagcaaaatctgttgggtaaagag 191  Q
    |||||||||||||| |||||||| |||||||||| |||||| |||||||    
T  11561527 tattttcggtatttcagttgggcgcgagcaaaatatgttggctaaagag 11561575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 95
Target Start/End: Original strand, 9008810 - 9008845
Alignment:
Q  60 gagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||||||||||||||||| |||||||||||||    
T  9008810 gagctctctatttatagagaaaattcacaactaata 9008845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 33223266 - 33223220
Alignment:
Q  205 ttttttgacattcaaaacgtaatattgacatatgaaaatgacatttt 251  Q
    |||||||||||||||||||| ||||||||| ||  ||||||||||||    
T  33223266 ttttttgacattcaaaacgtcatattgacacatagaaatgacatttt 33223220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 2912156 - 2912107
Alignment:
Q  142 gtattttcggtattttagttgggcacgagcaaaatctgttgggtaaagag 191  Q
    |||||||  ||||||||||||||| | |||||||| ||||||||||||||    
T  2912156 gtattttaagtattttagttgggcgcaagcaaaatgtgttgggtaaagag 2912107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 32302442 - 32302527
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||| ||||||||||||||||||| ||  ||||||||   ||| || ||| |||||||||||| | || ||||||||||    
T  32302442 aagcacaggaaacatcaactgtgaatttcggtgtgtagaatgcaccatgtcagttctatatttatagagatagtttacaactaata 32302527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 1043847 - 1043907
Alignment:
Q  35 tttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || ||||||| ||| ||| |||||| |||||||||||||| ||||||| |||||    
T  1043847 tttcggtgtgcagaatgaattatgtcagctctttatttatagagaaaattcacaattaata 1043907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 11289466 - 11289434
Alignment:
Q  57 tgtgagctctctatttatagagaaatttcacaa 89  Q
    |||||||||| ||||||||||||||||||||||    
T  11289466 tgtgagctctatatttatagagaaatttcacaa 11289434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 9185182 - 9185090
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9185182 agaggaaaagcacaggaatcatcaactctgaatttcggggtccagaatgcattgtgtgagctctctatttgtagagaaatttcacaactaata 9185090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 14868566 - 14868474
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  14868566 agaggaaaagcacaggaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaata 14868474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 14877368 - 14877460
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  14877368 agaggaaaagcacaggaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaata 14877460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 9191047 - 9190955
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9191047 agaggaaaagcacaggaatcatcaactctgaatttcggggtccataatgcattgtgtgagctctctatttgtagagaaatttcacaactaata 9190955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 14899114 - 14899022
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| | ||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  14899114 agaggaaaagcacatgaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaata 14899022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 15225768 - 15225854
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  15225768 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactctgtgagctctctatttatagagaaatttcacaactaatag 15225854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 26034784 - 26034877
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| | ||| |||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26034784 agaggaaaagcacatgaaacatcgactgtgtatttcagggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 26034877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 34561020 - 34561112
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||||||||||||||||||||||| ||   ||| ||| | ||||||||||||||||||||||||| |||||||||||||    
T  34561020 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaata 34561112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 7902608 - 7902517
Alignment:
Q  4 gaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||| |||||||||||| |||||||||||| ||    || ||| ||||||||||||||||||||||||||| |||||||||||||    
T  7902608 gaggaaaagcacaggaagcatcaaatgtgaatttcggtgtgtgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 7902517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 10713543 - 10713612
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  10713543 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 10713612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 10927313 - 10927382
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  10927313 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 10927382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 12488401 - 12488486
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  12488401 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 12488486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 14953546 - 14953461
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  14953546 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 14953461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 15011307 - 15011222
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  | |||||| |||||||| |||||||||||||||| | || ||||||||||    
T  15011307 aagcacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaata 15011222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 3997560 - 3997468
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||||||||||||||||||||| ||    || ||| | ||||||||||||||||||||||||| |||||||||||||    
T  3997560 agaggaaaaacacaggaagcatcaactgtgaatttcggtgtgtgtaaagcaatatgtgagctctctatttatagagaaagttcacaactaata 3997468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 8660901 - 8660809
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| |||||||||||||||||||| |||| ||  | | |||| ||||||||||||||||||| ||||||| ||||| |||||||    
T  8660901 agaggaaaagcacaggaagcatcaactgtgaatctcggtgtgtatactgcactgtgtgagctctctatttacagagaaaattcactactaata 8660809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 31297977 - 31297901
Alignment:
Q  19 aagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||| |||||||||||| ||   ||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  31297977 aagcatcaattgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagagagttcacaactaata 31297901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 13521470 - 13521391
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||   |   ||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  13521470 aggaagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaata 13521391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 41817393 - 41817455
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaa 80  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||||||||||| ||||||    
T  41817393 gaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagctctctatttacagagaa 41817455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 47575276 - 47575350
Alignment:
Q  21 gcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||| |||||||||| ||   ||||||| |||||||||||||| |||||||||||| |||||||||||||    
T  47575276 gcatcaactttgaatttcggtgtgtggaatgcactgtgtgagctctctttttatagagaaaattcacaactaata 47575350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 25690597 - 25690666
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  25690597 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 25690666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 31323583 - 31323526
Alignment:
Q  134 acgcatgagtattttcggtattttagttgggcacgagcaaaatctgttgggtaaagag 191  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  31323583 acgcaggagtattttcggtatttcagttgggcgcgagcaaaatctcttgggtaaagag 31323526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 53687700 - 53687757
Alignment:
Q  195 agaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    |||||||| ||||| ||||||||||||||| ||||||||| || ||||||||||||||    
T  53687700 agaaaattacttttctgacattcaaaacgtcatattgacacataaaaatgacattttt 53687757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 39320202 - 39320250
Alignment:
Q  47 gaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  39320202 gaatgaattgtgtgagctctctatttatagtgaaagttcacaactaata 39320250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 18023224 - 18023276
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgag 62  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| ||||||||    
T  18023224 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcagtgtgtgag 18023276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 10011709 - 10011760
Alignment:
Q  140 gagtattttcggtattttagttgggcacgagcaaaatctgttgggtaaagag 191  Q
    ||||||||||||||||| |||||| | |||||||||| |||||||| |||||    
T  10011709 gagtattttcggtatttcagttggacgcgagcaaaatgtgttgggttaagag 10011760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 10018850 - 10018901
Alignment:
Q  140 gagtattttcggtattttagttgggcacgagcaaaatctgttgggtaaagag 191  Q
    ||||||||||||||||| |||||| | |||||||||| |||||||| |||||    
T  10018850 gagtattttcggtatttcagttggacgcgagcaaaatgtgttgggttaagag 10018901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 32545533 - 32545571
Alignment:
Q  57 tgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  32545533 tgtgagctctctatttatagagaaaattcgcaactaata 32545571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 52742668 - 52742630
Alignment:
Q  57 tgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  52742668 tgtgagctctctatttatagagaaaattgacaactaata 52742630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 55073797 - 55073834
Alignment:
Q  58 gtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  55073797 gtgagatctctatttatagagaaaattcacaactaata 55073834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 9041871 - 9041927
Alignment:
Q  196 gaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    |||| |||||||| ||||||||||||||| ||||||| | ||| ||||||| |||||    
T  9041871 gaaatttgcttttatgacattcaaaacgtcatattgatacatggaaatgacgttttt 9041927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 55246616 - 55246560
Alignment:
Q  196 gaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    |||||||  |||| ||||||||||||||| ||||| ||||||  |||||||||||||    
T  55246616 gaaaattaattttctgacattcaaaacgtcatatttacatatagaaatgacattttt 55246560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 30287 - 30373
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||||||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30287 aagcataggaagcatcaactgtgaatttcggggtgtcgaatgcagtgtgtgagctctctatttatagagaaatttcacaactaatag 30373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 26981198 - 26981284
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  26981198 aagcacaggaagcatcaactgtgtatttcggggtccagaatgcatcgtgtgagctctctatttataaagaaatttcacaactaatag 26981284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 27073588 - 27073674
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    ||||| ||||| ||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  27073588 aagcacaggaaacatcaactgtgtatttcggggtccagaatgcatcgtgtgagctctctatttataaagaaatttcacaactaatag 27073674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 14073731 - 14073824
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| | ||| ||| ||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14073731 agaggaaaagcacaagaatcatgaactgtgaatttcggggtccggaatgcattgtatgagctctctatttatagagaaatttcacaactaatag 14073824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 24588666 - 24588584
Alignment:
Q  13 cataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  24588666 cataggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaata 24588584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 18387528 - 18387621
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||| |||||||||||| ||| || ||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  18387528 agaggaaaagcacaggaatcatcaactgtgatttttggggtccaaaatgcattgtgtgagctctctatttatacagaaacttcacaattaatag 18387621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 16625019 - 16625104
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  16625019 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 16625104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 6112257 - 6112165
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| | ||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||| ||||| ||| |||||||||    
T  6112257 agaggaaaagcacaagaagcatcaactgtgaatttcggtgtgttgaatgcactgtgtgagctctctatttatatagaaagttcccaactaata 6112165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 19772495 - 19772418
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  19772495 gaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 19772418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 15704396 - 15704317
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||||||||||||||| |||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  15704396 aggaagcatcaactgtgaatctcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 15704317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 22806954 - 22807039
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| || ||||||||||||| | || ||||||||||    
T  22806954 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttccctatttatagagatagtttacaactaata 22807039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 22949835 - 22949904
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  22949835 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 22949904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 22953791 - 22953860
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  22953791 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 22953860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 23872279 - 23872348
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  23872279 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 23872348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 23876235 - 23876304
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  23876235 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 23876304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 31477195 - 31477110
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| || ||||||||||||||||||| || ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  31477195 aagcaaagaaagcatcaactgtgaattttggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 31477110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 27324544 - 27324467
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||| ||  ||||||||  ||||||| |||||||||||||||| | || ||||||||||    
T  27324544 aggaagcatcaactgtgaatttcggtgtgtagaatgca--gtgtgagttctctatttatagagatagtttacaactaata 27324467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 2077415 - 2077498
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaa 93  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||| ||| ||||||||||||| || | || ||||||||    
T  2077415 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaa 2077498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 16760985 - 16761051
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatag 76  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||    
T  16760985 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatag 16761051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 19803303 - 19803250
Alignment:
Q  199 aattgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||||| |||||    
T  19803303 aattgctcttctgacattcaaaacgtaatattgacacatgaaaatgactttttt 19803250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 19802531 - 19802581
Alignment:
Q  195 agaaaattgcttttttgacattcaaaacgtaatattgacatatgaaaatga 245  Q
    |||||||| ||||||||||||||||||| | ||||||||| ||||||||||    
T  19802531 agaaaattacttttttgacattcaaaacatcatattgacacatgaaaatga 19802581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 1634993 - 1634941
Alignment:
Q  200 attgcttttttgacattcaaaacgtaatattgacatatgaaaatgacattttt 252  Q
    ||||||||| ||||||||||||||| ||||||||| ||| ||||||| |||||    
T  1634993 attgcttttctgacattcaaaacgttatattgacacatggaaatgacgttttt 1634941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 15645337 - 15645386
Alignment:
Q  46 agaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||| ||||||||||||||||||| ||||| ||| |||||||||    
T  15645337 agaatggattatgtgagctctctatttatatagaaaattcgcaactaata 15645386  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 1632118 - 1632074
Alignment:
Q  203 gcttttttgacattcaaaacgtaatattgacatatgaaaatgaca 247  Q
    |||||||||||||||||||||| |||||| || ||| ||||||||    
T  1632118 gcttttttgacattcaaaacgttatattggcacatggaaatgaca 1632074  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 2862916 - 2862884
Alignment:
Q  57 tgtgagctctctatttatagagaaatttcacaa 89  Q
    ||||||||||||||||||||||||| |||||||    
T  2862916 tgtgagctctctatttatagagaaaattcacaa 2862884  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 15640950 - 15640998
Alignment:
Q  47 gaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||| ||||||||| ||||||||||||| | |||||||||||||    
T  15640950 gaatgaattatgtgagctcactatttatagagagaattcacaactaata 15640998  T

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Target: scaffold0004 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 199788 - 199879
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  199788 agaggaaaagcacaggaatcatcaactgtgaatttcgg--tccagaatgcattgtgtgagctctctatttatagagaaacttcgcaactaatag 199879  T

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Target: scaffold0041 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 35202 - 35110
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||||||||||||||||||||||| ||   ||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  35202 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 35110  T

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Target: scaffold0182 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 9365 - 9286
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  9365 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaata 9286  T

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Target: scaffold0044 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 81154 - 81247
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  81154 agaggaaaagcacaggaatcatcaactgtgaatttcggggtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaatag 81247  T

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Target: scaffold0044; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 64756 - 64849
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaatag 96  Q
    |||||| ||||| | ||| ||||||||||||||||||| ||   | | ||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  64756 agaggaaaagcacatgaatcatcaactgtgaatttcggggtgttgtacgcattgtgtgagccctctatttatagagaaacttcccaactaatag 64849  T

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Target: scaffold0034 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 121169 - 121254
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  121169 aagcataggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 121254  T

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Target: scaffold0060 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 47471 - 47379
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||||||||||||||||||||||| ||    || ||| ||||||||||||||||||||||||||| |||||||||||||    
T  47471 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 47379  T

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Target: scaffold0060; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 52415 - 52323
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| ||||||||||||||||||||||||| ||    || ||| ||||||||||||||||||||||||||| |||||||||||||    
T  52415 agaggaaaagcacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaata 52323  T

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Target: scaffold0155 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22271 - 22337
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctcta 69  Q
    |||||| || || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22271 agaggaaaaccacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctcta 22337  T

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Target: scaffold0572 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 10467 - 10382
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  10467 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 10382  T

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Target: scaffold0144 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 7480 - 7565
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  7480 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 7565  T

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Target: scaffold0011 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 127006 - 127091
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  127006 aagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 127091  T

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Target: scaffold0070 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 59022 - 59114
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| |||||||||||| | |||||||||| ||   ||| ||||| ||||||||||||||||||||||||| |||||||||||||    
T  59022 agaggaaaagcacaggaagcatcaattatgaatttcggtgtatggaaagcattatgtgagctctctatttatagagaaagttcacaactaata 59114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 63284 - 63316
Alignment:
Q  63 ctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||| |||||||||||||    
T  63284 ctctctatttatagagaaagttcacaactaata 63316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 71740 - 71820
Alignment:
Q  16 aggaagcatcaactgtgaa-tttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||| ||| || ||  |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  71740 aggaagcatcaactgtgaaattttggtgtgtagaatgcactgtgtgagctctctatttatagagaaaattcacaactaata 71820  T

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Target: scaffold0431 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 14960 - 14883
Alignment:
Q  18 gaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  14960 gaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 14883  T

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Target: scaffold0415 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 1091 - 1176
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  1091 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 1176  T

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Target: scaffold0229 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 10917 - 10832
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  10917 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 10832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 32076 - 31991
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  32076 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 31991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 13503 - 13418
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  13503 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 13418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 21477 - 21392
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  21477 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaata 21392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 6984 - 7076
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||||| | |||||||||||| |||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  6984 agaggaaaagcacatgaagcatcaactatgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 7076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 12450 - 12374
Alignment:
Q  19 aagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  12450 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 12374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 49482 - 49390
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||| ||||||||||||||||| ||   ||| ||| |||||||| |||||||||||||||||| |||||||||||||    
T  49482 agaggaaaaacacaggaagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaata 49390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 149152 - 149244
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| || || ||||||| ||||||||||||||||| ||   ||| ||| |||||||| |||||||||||||||||| |||||||||||||    
T  149152 agaggaaaaacacaggaagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaata 149244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 5372 - 5287
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||| ||||||||||||||||||||||||| ||  || ||||| |||||||| ||||||||||||| || | || ||||||||||    
T  5372 aagcacaggaagcatcaactgtgaatttcggtgtgtaggatgcactgtgtgagttctctatttatagggatagtttacaactaata 5287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 35502 - 35433
Alignment:
Q  10 aagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||| |||||| |||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||    
T  35502 aagcacaggaagtatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 35433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 738 - 646
Alignment:
Q  3 agaggagaagcataggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    |||||| ||| | ||||||||||||||||||||||||| ||   ||| ||| |||||||||||||||| | |||||||| |||| ||||||||    
T  738 agaggaaaagtacaggaagcatcaactgtgaatttcggtgtattgaaagcactgtgtgagctctctatatgtagagaaagttcataactaata 646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 21916 - 21979
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagaga 79  Q
    ||||||||||||||||||||||| | ||  |||||||| |||||||| ||||||||||||||||    
T  21916 aggaagcatcaactgtgaatttcagtgtgtagaatgcactgtgtgagttctctatttatagaga 21979  T

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Target: scaffold0292 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 7776 - 7855
Alignment:
Q  16 aggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaata 95  Q
    ||||||||| || |||||||||| | ||  |||||||| |||||||| |||||||||||||||| | || ||||||||||    
T  7776 aggaagcataaattgtgaatttctgtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaata 7855  T

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