View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10705_low_9 (Length: 248)
Name: NF10705_low_9
Description: NF10705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10705_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 182
Target Start/End: Original strand, 24728694 - 24728862
Alignment:
| Q |
14 |
aggcctcaatcgttgttgtgttgtattttccgaaaaatcaaaaactgttatgttgaagcccaaatcatggttgcgaaccttttatttacaaccctattaa |
113 |
Q |
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| T |
24728694 |
aggcctcaatcgttgttttgttgtattttccgaaaaatcaaaaactgttatgttgaagcccaaatcatggttgcgaaccttttatttacaaccctattaa |
24728793 |
T |
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| Q |
114 |
cctttattcccataagtctgtctttcatgtaaagctttttccacttttatgtgtagtaattagtcagag |
182 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
24728794 |
cctttattcccataagtctgtctttcatgtaaagctttttccacttttacgtgtagtaattagtcagag |
24728862 |
T |
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